Larimichthys crocea (large yellow croaker): 104928593
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Entry
104928593 CDS
T04659
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104928593 (mms19)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104928593 (mms19)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104928593 (mms19)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
104928593 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
RTP1_C1
PORR
API5
Motif
Other DBs
NCBI-GeneID:
104928593
NCBI-ProteinID:
XP_019108875
UniProt:
A0A6G0HZA5
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All DBs
Position
XVI:complement(12270705..12283146)
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AA seq
1032 aa
AA seq
DB search
MAADSALLLSLVEEYVSGLQDSKAKDTARGVKDGQFTVLQLVEALGLSLTSSQTHTRARG
VQLLSEVLHECYGGLTEREVEVLIAFYENRLKDHHAIIPPVLQGLRALTKCTALPPGSAV
SMLRSLFQDVHVQSLMLAERACVYNMLINLMETREAELKGLGADFVFGFVQSMDGERDPR
NLLLAFQVAKTIIRRGYDLGKFTEELFEVTSCYFPIDFTPPPNDPHGITKEELIQMLRDV
LTGTPLFAEFLLPLIIEKLDSDVQSSKLDSLQTLTACLSQYEHKDLAEFLEGLWASLRRE
VFQTTSEKIESAGLAALTALTSCLSRSVLNSDSEDSLCTFINLVLEDCKHHLSEPDLKLV
WPSAKLLQAACSGSSRASHLVTAAVMPSLVEQYNNRTQCAHRRTLLEVVQRFIQAVKASP
STDNEESAFLAFRPSLCSMVFSALTENNDSLQITATSVLTSLAQQTGLLLDSDIELAVDH
LTRLLLMEEDDRVSLAVVQCVGALAALHPAAFITKLIPRLKNEMFSEPMKQDDDNDNKAS
EQQSHHAVRQRCLSALAAMSTQSSVVQESTPVLLEVLSSAHTGSVDFSVEEVVLACRSLQ
RIAEQVQDTEETGRCFHEIIIPRLLSLALQAALQDESSDRYSPLVEEVVLSAIVPVISTS
CSRLQPTLAGQTASRAVSLFLDGDVSFLPDNSFPSHIQLLKKQQGESWSQSQMVCLLMGC
VCSLPRSVEVPRMDHLLSQLEEMSCTCSHPLSYTSAAKCFAGLVNKRAQGDSLDGLIQNT
MKRVCSELDSASSSVRTQAFTLMIWVAKALLHRYHPLSTALTDKLFSLLDDAELGPMAAD
SFSLLMSDSVDVLNRACHADIRIMYRQRFFSENSAKLVQGFNNAPQEKKPNYLKALSNIV
NKLPKQVQVTELPALLSLLLEALSCPDQAVQLSTLSCLQPVLIDPPSALILQLEALVSRL
LALTSSPAMNVRIASLCCIHAVSHFPVHEVLPFRARVLRALARPLDDKKRMVRSEAVRAR
AEWFLLGSPGGR
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacagtgccttgctgctgtctctggtggaggaatatgtctcgggactgcag
gacagcaaggccaaagacacagcaagaggtgtcaaagatggacagtttacagtactgcag
ttagtggaagcactgggattaagtctgaccagctctcagactcacactcgagccagagga
gtccagcttctctccgaggttttgcacgagtgctacggaggtctcaccgagagagaagtg
gaagtgctcatcgccttctatgaaaaccgtctaaaggaccatcacgccatcattccgcct
gtgttacagggactcagagccctgacaaaatgtacggcgttgcctcctggctcagctgtc
tccatgctgaggtctttgttccaggatgttcatgttcagtctttgatgctggcggagaga
gcttgcgtctacaacatgctcatcaacctcatggagaccagagaagccgaactgaagggt
ttgggagcagactttgtgttcggttttgtccaatcaatggacggagagcgggatcctcgc
aacctcctgttagccttccaggtcgccaagaccatcatccgccgaggctatgatctaggt
aaattcacagaggagctgtttgaggtgacgtcctgctatttccccatcgacttcaccccc
cctcccaatgacccccatggcatcaccaaagaggagctcatccagatgctgagggacgtc
ctcactgggacgccactgtttgctgagtttctgttgcctctcatcatcgaaaagctggac
tcagacgttcagagctccaagctggactcgctgcagactctgactgcttgcttgtcacaa
tacgaacataaggatttggcagagttcctcgagggactgtgggcttcgctgcgcagagag
gtgtttcagacaaccagcgagaagatcgagtctgccggcctcgctgctctcaccgctctc
acttcctgtctgtctcgctcggtcctcaactctgactctgaagactccctctgcacattc
atcaacctcgttctcgaagactgcaaacatcacctcagcgagccggatctgaagctcgtg
tggcccagcgccaagctgcttcaggccgcctgcagcggctccagccgggcgagccacctc
gtaacagccgccgtcatgccgtctctcgtcgagcagtacaacaacaggacgcagtgcgcc
cacagacgaactttactggaggtggtgcagcgattcatccaggcagtaaaagcctctccg
tctacagacaatgaagagagcgcatttctcgccttccgcccgtctctgtgcagcatggtg
ttctcagctctgacggagaataacgacagcctgcagatcacggccacctctgtgctcacc
tcacttgcacagcagacaggtctgctgctcgactccgacattgagctggctgtagatcac
ctgaccagactgttgctgatggaggaggacgacagagtcagccttgctgttgtgcagtgt
gtcggagccttagcagcgttgcatccagcagcctttatcactaaactgatcccgagacta
aagaatgagatgttttcagagcccatgaaacaagacgacgacaacgacaacaaagcttca
gagcagcagtcccatcatgcagtgcgccagcggtgtctgtctgctctggctgcgatgtcc
acccaatccagtgttgtccaggagagcacgcccgtcctcttagaggtcctcagctcagca
cacacaggtagcgttgatttctcagtggaggaggtggtgttggcgtgtcgcagcctccag
agaatagcagagcaggttcaggacaccgaggagacgggtcgatgcttccacgaaatcatc
atcccgcgactgctgtctctggctctgcaggcagcgctgcaggacgagtcatctgatcga
tatagccctcttgtggaggaggtggtcctgtccgccatcgtccctgtcatcagtacttcc
tgctccaggctacagcccacgttggcaggacagacggcgtcgagggctgtatcgctcttc
ctggatggtgacgtttcttttttacctgacaactctttcccctcacacatccagctgctc
aagaagcagcagggggaatcatggagccagtcccagatggtttgtctgctcatgggatgt
gtgtgctcgttacctcgcagcgtggaggtgcctcggatggatcacctgctgtcacagctg
gaggagatgagctgcacctgcagccacccactgtcgtacacctcagcggcaaagtgcttc
gccggcctggttaataagagagcgcagggggattctcttgatggcctcattcagaacacg
atgaagagagtttgtagtgagctcgactctgcgtcttcgtctgtacgcactcaggctttc
accctcatgatctgggttgccaaggctctgcttcaccgataccaccctctgtctacagca
ctgaccgacaagctcttctctctgctcgatgatgctgagctgggtccaatggcggcagac
agcttctcgctgctcatgagcgactccgtcgacgtcctgaaccgcgcctgccacgccgac
attcgcatcatgtaccgccagagattcttcagcgagaattcggccaagttggtccagggc
ttcaacaatgcgccgcaagagaagaagcccaactacctgaaggctctgtctaacatcgtc
aacaaactgccaaagcaggttcaagtcactgaactaccagcgctcctgtctctgctgctg
gaggccttgtcgtgtcctgaccaggccgtccagctgtccaccctgtcctgtctgcagccc
gtcctcatcgacccaccgtcggcgctcatactgcagctagaagctttggtcagcaggctg
ctagccctcacctctagtcctgcaatgaatgtaaggatcgcttcattgtgctgcatccat
gctgtttcccacttccccgtgcatgaggtgttgccgtttcgggcgcgagtgctgcgagct
ctggctcgacctctggacgacaagaagaggatggtaagaagcgaggcggttcgggcaaga
gcagagtggttcctgttaggaagtcctggagggaggtga
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