KEGG   Larimichthys crocea (large yellow croaker): 104928593
Entry
104928593         CDS       T04659                                 
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lco03036]
    104928593 (mms19)
   03400 DNA repair and recombination proteins [BR:lco03400]
    104928593 (mms19)
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    104928593 (mms19)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104928593 (mms19)
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N RTP1_C1 PORR API5
Other DBs
NCBI-GeneID: 104928593
NCBI-ProteinID: XP_019108875
UniProt: A0A6G0HZA5
LinkDB
Position
XVI:complement(12270705..12283146)
AA seq 1032 aa
MAADSALLLSLVEEYVSGLQDSKAKDTARGVKDGQFTVLQLVEALGLSLTSSQTHTRARG
VQLLSEVLHECYGGLTEREVEVLIAFYENRLKDHHAIIPPVLQGLRALTKCTALPPGSAV
SMLRSLFQDVHVQSLMLAERACVYNMLINLMETREAELKGLGADFVFGFVQSMDGERDPR
NLLLAFQVAKTIIRRGYDLGKFTEELFEVTSCYFPIDFTPPPNDPHGITKEELIQMLRDV
LTGTPLFAEFLLPLIIEKLDSDVQSSKLDSLQTLTACLSQYEHKDLAEFLEGLWASLRRE
VFQTTSEKIESAGLAALTALTSCLSRSVLNSDSEDSLCTFINLVLEDCKHHLSEPDLKLV
WPSAKLLQAACSGSSRASHLVTAAVMPSLVEQYNNRTQCAHRRTLLEVVQRFIQAVKASP
STDNEESAFLAFRPSLCSMVFSALTENNDSLQITATSVLTSLAQQTGLLLDSDIELAVDH
LTRLLLMEEDDRVSLAVVQCVGALAALHPAAFITKLIPRLKNEMFSEPMKQDDDNDNKAS
EQQSHHAVRQRCLSALAAMSTQSSVVQESTPVLLEVLSSAHTGSVDFSVEEVVLACRSLQ
RIAEQVQDTEETGRCFHEIIIPRLLSLALQAALQDESSDRYSPLVEEVVLSAIVPVISTS
CSRLQPTLAGQTASRAVSLFLDGDVSFLPDNSFPSHIQLLKKQQGESWSQSQMVCLLMGC
VCSLPRSVEVPRMDHLLSQLEEMSCTCSHPLSYTSAAKCFAGLVNKRAQGDSLDGLIQNT
MKRVCSELDSASSSVRTQAFTLMIWVAKALLHRYHPLSTALTDKLFSLLDDAELGPMAAD
SFSLLMSDSVDVLNRACHADIRIMYRQRFFSENSAKLVQGFNNAPQEKKPNYLKALSNIV
NKLPKQVQVTELPALLSLLLEALSCPDQAVQLSTLSCLQPVLIDPPSALILQLEALVSRL
LALTSSPAMNVRIASLCCIHAVSHFPVHEVLPFRARVLRALARPLDDKKRMVRSEAVRAR
AEWFLLGSPGGR
NT seq 3099 nt   +upstreamnt  +downstreamnt
atggctgcggacagtgccttgctgctgtctctggtggaggaatatgtctcgggactgcag
gacagcaaggccaaagacacagcaagaggtgtcaaagatggacagtttacagtactgcag
ttagtggaagcactgggattaagtctgaccagctctcagactcacactcgagccagagga
gtccagcttctctccgaggttttgcacgagtgctacggaggtctcaccgagagagaagtg
gaagtgctcatcgccttctatgaaaaccgtctaaaggaccatcacgccatcattccgcct
gtgttacagggactcagagccctgacaaaatgtacggcgttgcctcctggctcagctgtc
tccatgctgaggtctttgttccaggatgttcatgttcagtctttgatgctggcggagaga
gcttgcgtctacaacatgctcatcaacctcatggagaccagagaagccgaactgaagggt
ttgggagcagactttgtgttcggttttgtccaatcaatggacggagagcgggatcctcgc
aacctcctgttagccttccaggtcgccaagaccatcatccgccgaggctatgatctaggt
aaattcacagaggagctgtttgaggtgacgtcctgctatttccccatcgacttcaccccc
cctcccaatgacccccatggcatcaccaaagaggagctcatccagatgctgagggacgtc
ctcactgggacgccactgtttgctgagtttctgttgcctctcatcatcgaaaagctggac
tcagacgttcagagctccaagctggactcgctgcagactctgactgcttgcttgtcacaa
tacgaacataaggatttggcagagttcctcgagggactgtgggcttcgctgcgcagagag
gtgtttcagacaaccagcgagaagatcgagtctgccggcctcgctgctctcaccgctctc
acttcctgtctgtctcgctcggtcctcaactctgactctgaagactccctctgcacattc
atcaacctcgttctcgaagactgcaaacatcacctcagcgagccggatctgaagctcgtg
tggcccagcgccaagctgcttcaggccgcctgcagcggctccagccgggcgagccacctc
gtaacagccgccgtcatgccgtctctcgtcgagcagtacaacaacaggacgcagtgcgcc
cacagacgaactttactggaggtggtgcagcgattcatccaggcagtaaaagcctctccg
tctacagacaatgaagagagcgcatttctcgccttccgcccgtctctgtgcagcatggtg
ttctcagctctgacggagaataacgacagcctgcagatcacggccacctctgtgctcacc
tcacttgcacagcagacaggtctgctgctcgactccgacattgagctggctgtagatcac
ctgaccagactgttgctgatggaggaggacgacagagtcagccttgctgttgtgcagtgt
gtcggagccttagcagcgttgcatccagcagcctttatcactaaactgatcccgagacta
aagaatgagatgttttcagagcccatgaaacaagacgacgacaacgacaacaaagcttca
gagcagcagtcccatcatgcagtgcgccagcggtgtctgtctgctctggctgcgatgtcc
acccaatccagtgttgtccaggagagcacgcccgtcctcttagaggtcctcagctcagca
cacacaggtagcgttgatttctcagtggaggaggtggtgttggcgtgtcgcagcctccag
agaatagcagagcaggttcaggacaccgaggagacgggtcgatgcttccacgaaatcatc
atcccgcgactgctgtctctggctctgcaggcagcgctgcaggacgagtcatctgatcga
tatagccctcttgtggaggaggtggtcctgtccgccatcgtccctgtcatcagtacttcc
tgctccaggctacagcccacgttggcaggacagacggcgtcgagggctgtatcgctcttc
ctggatggtgacgtttcttttttacctgacaactctttcccctcacacatccagctgctc
aagaagcagcagggggaatcatggagccagtcccagatggtttgtctgctcatgggatgt
gtgtgctcgttacctcgcagcgtggaggtgcctcggatggatcacctgctgtcacagctg
gaggagatgagctgcacctgcagccacccactgtcgtacacctcagcggcaaagtgcttc
gccggcctggttaataagagagcgcagggggattctcttgatggcctcattcagaacacg
atgaagagagtttgtagtgagctcgactctgcgtcttcgtctgtacgcactcaggctttc
accctcatgatctgggttgccaaggctctgcttcaccgataccaccctctgtctacagca
ctgaccgacaagctcttctctctgctcgatgatgctgagctgggtccaatggcggcagac
agcttctcgctgctcatgagcgactccgtcgacgtcctgaaccgcgcctgccacgccgac
attcgcatcatgtaccgccagagattcttcagcgagaattcggccaagttggtccagggc
ttcaacaatgcgccgcaagagaagaagcccaactacctgaaggctctgtctaacatcgtc
aacaaactgccaaagcaggttcaagtcactgaactaccagcgctcctgtctctgctgctg
gaggccttgtcgtgtcctgaccaggccgtccagctgtccaccctgtcctgtctgcagccc
gtcctcatcgacccaccgtcggcgctcatactgcagctagaagctttggtcagcaggctg
ctagccctcacctctagtcctgcaatgaatgtaaggatcgcttcattgtgctgcatccat
gctgtttcccacttccccgtgcatgaggtgttgccgtttcgggcgcgagtgctgcgagct
ctggctcgacctctggacgacaagaagaggatggtaagaagcgaggcggttcgggcaaga
gcagagtggttcctgttaggaagtcctggagggaggtga

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