Larimichthys crocea (large yellow croaker): 104928668
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Entry
104928668 CDS
T04659
Symbol
rnf17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104928668 (rnf17)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104928668 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf_RING_Vps8
zf-RING_2
Prok-RING_4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
104928668
NCBI-ProteinID:
XP_019131943
LinkDB
All DBs
Position
XVIII:4163818..4182202
Genome browser
AA seq
1581 aa
AA seq
DB search
MDRGDNSNAVVCNLCGEAFTLPEDEADGNLPRVLSCGHIYCTTCLLSIQYDSVIRCPECE
VEFTVPEGGVYGLQEESRIIGLMYTAKMNKIRRCERLKTYRRKTFPPSPDMNANKGDMQQ
PADLKKIKKTVDEALCRGAENLAQLEHIYKTLTTGLAEQVKRERARLEMELKQAADKAVH
AVQKWKDVQLKQLSKLEAQFSTTQVVVCCVRERIKALKISMQMAKEICRVPFLEQHCTLD
KVLKTLQAPVDSRSFDMKCTNMDSGMSCVFQSEGLKQSLSLSLKMEEGNQKQCSPWRAES
KNSNCTPPKPRCANTRKQAQKSPASHSLSSESSSPSPKPRHRFRISQHNATSNLQTPDVI
VEHLEESQKHALPPTGPELANGRGRINRRRRCQVFDKSRSVTQWVVVAHIVNPNQFYVHY
VTEKKENETLSRKINQFCYKDGSHFTASDTVETGSVVFVKWTDGLWCRANVLQMVEIGCV
EDVKACPVDQLASIQVYFLDYGLTKSLIIQNDEATTESSLKAVNNHLRKVTEAMNMELGH
FVPQAIRCSLKDLVPYDLTKGWSEEARAEFHNVVGSAAVEMRLLGQDGDSLLVDLRKAPM
NQSSDVPISVREYLVFIEVARFYSPVTLGRKPLLYYPPVYPKINTEVDVVVSHINNPADF
FIQLVHNMESLLLSAKLQECYSATETGGDHLRVYCPVMGQAYVARYDDKWYRAQVIGHPG
GREVEVYYVDFGNKNILSVSDLRMIKDEFFALPSMAIHCCLSDVIPLDGESWSDACTKRL
ISLVYQKLVTIVATETVPKTKPLPIKLFESILDRPLSNIAELLVKEGLACFKRGLKSKDA
SLPGDESAVWDPPLEHSLATGDADAPDQKITGEQGEELLDVQPLLKLQTQLKDLKVKVSH
VNSPSSFYVQLLQYNSQLKRVCELVKKECALTEPQDVAWKADMYCAAHMNGVWERGQISS
DVTSSDIAELMRCDHGNTVKLHVCNLRTLPSSLMGSLALECTLSGIRPAGGRSTWTATAC
DLFSHYLTGASAVMTVKKLTDERPVPVTLFCSNRTGQFVSIADFLTSEGLALRERKPRNA
DVHDPKESDAQSPARATQTECSDDGNTHPSPFLKPTPSPSSHTPPKPAPRTIMSAEKVTT
KLYQPPELPCPGHIQISVSAIREDGLIYGRTENAECQLEQLRERIHQSIKTLPRPKSYTW
KSVLGCAVIGPDMLWYRGQLLEVLGGHVKVQYVDYGLVENIPVVHVYPILLCEDVPQLCM
PFQLHNVNPVGGKWQQDAVAMLREMLLNRSVDIDIMELPTDPRGPLTVELFLDGLSLSQI
LCHHEHATIDQTVSTPKRLMTPASLDDWDIDTEGLEGPQEPLLGPFIYPDLPQEGEHFPV
RVKHLLTPTELFLWPQREGVADAEVDGETLDEALSRINANIDSLPQLNSFSCGDISSLLF
PGGPCLAEYSDGNYYRAKLIRFISAEPIMVLVQHVDFGSDDTLPITKLREMPAELLRFPS
RALKVKVAGFKAPSVRNRQEDMLPYSPEWSVKATMEMIDLLNGRIEATVVAREPELTVVL
YNEDGELVHLPLVSSGLAELE
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggacagaggagacaactccaacgccgtggtgtgcaacttatgtggggaggcatttact
ctgcctgaggatgaagctgatggtaacctccctcgtgtgctttcatgtggccacatctac
tgcacaacttgcctgctgtccattcagtatgacagcgtcattcgatgtccagagtgtgag
gttgagttcactgttcctgaaggtggggtgtatgggctgcaagaagaaagcagaatcatc
ggcctcatgtacactgctaaaatgaacaagataagaaggtgtgaacgattaaagacttac
agaaggaaaacgttcccaccatccccagacatgaatgccaataaaggggatatgcagcag
ccagctgatcttaagaagatcaagaagactgtggatgaggcgttatgccgaggagcagaa
aaccttgcccagctggaacacatctacaagactctgacaactggactggcggaacaagtg
aagagagagagagctcggctggagatggagctcaagcaagctgcagacaaagctgtacat
gctgttcaaaagtggaaggatgtgcagttgaagcagctgtcaaaactggaggcacaattc
tccaccactcaggtcgttgtctgttgtgttcgggagaggattaaggccctgaagatttcc
atgcagatggccaaagaaatctgtcgtgtcccctttctggagcagcactgcaccctcgac
aaggttctgaagacgttgcaggctcctgtggatagccggtcctttgatatgaaatgcaca
aatatggattctggaatgagctgtgttttccagtcagaaggcctgaagcagagtctatca
ttgtctctgaagatggaagaaggcaaccaaaagcaatgctccccgtggcgagcagagagc
aagaacagcaactgtaccccacccaaacctaggtgcgccaacacacgaaaacaggcccag
aagagccccgcatctcacagtttgtcatcggagagctcgtctccaagcccaaaacctcgt
cacaggttcagaatctctcagcacaacgcgacctcaaacctccaaaccccagacgtaatt
gttgagcacttagaggaaagtcaaaaacacgctcttccacccactggtcctgagctggct
aatggcagagggagaatcaacaggaggaggagatgtcaggtgtttgacaagagcagaagt
gtcactcagtgggtggtggtagcccacattgtgaatccaaatcagttctacgtccactat
gtgaccgagaagaaggaaaacgagacgctgtctaggaagatcaaccagttctgctacaaa
gatggttctcacttcaccgccagtgacactgtggagactggctcagtggtctttgtcaag
tggaccgatgggctctggtgccgagccaatgtgcttcaaatggtggagatcggatgtgtg
gaggatgtgaaagcctgcccagttgaccagctcgccagcatccaagtctacttccttgac
tatggcctcaccaaaagcctcatcatacagaatgacgaggcgaccactgagtcctctctg
aaggctgtgaataaccacctgaggaaggtgactgaggcgatgaacatggagctgggtcac
tttgtccctcaggccatcagatgttccctcaaagacctcgtcccatatgacctgacaaag
ggttggagtgaagaggctcgggctgaattccacaacgtcgttggctcagcagcagtggag
atgaggcttctaggtcaggatggagactctttattggtggacctgaggaaagcccccatg
aaccaatccagtgacgtgcccatctctgtcagagagtacctcgttttcattgaagtggcc
aggttttattctccagtgacgttgggcagaaagcccctgctgtactacccccctgtctat
cccaagatcaacacagaggtcgatgttgtggtgtcgcacatcaataaccctgctgacttc
ttcatccagctggttcataacatggagtccttgttgctctcagctaagctccaggagtgt
tacagtgcaacagagaccggaggagatcacctcagagtctactgccctgtgatgggacag
gcctatgttgcccgctatgatgacaagtggtacagagctcaggtcatagggcatccaggg
ggcagagaagtggaggtgtattatgtggactttggcaataagaacatcttgtcagtcagt
gacttgagaatgatcaaagatgagttctttgctcttccttcaatggcaatccactgctgt
ttgtctgacgtgattcctctggatggagagagctggagtgatgcctgcaccaaaagactc
atcagcctggtttaccagaaacttgtcactattgtggctacagaaaccgtccctaagacc
aagcctctgccaatcaaactgtttgagagcatcctggacaggcctctgtccaatattgct
gaactcctggtcaaagagggactggcctgcttcaaaaggggacttaagtctaaggatgcc
tcgctccctggtgatgagtctgccgtatgggaccctccacttgagcatagtttggccaca
ggcgatgctgatgcccctgaccaaaagatcactggagagcagggcgaggagctgctggat
gtacagcctctgctgaagctccagacacagctcaaggacctgaaagtcaaagtcagtcac
gtcaactcaccgagcagcttctacgtccagctccttcagtacaactctcagcttaaaagg
gtgtgtgagctggtgaagaaggagtgtgcgcttacggagccccaagatgtggcgtggaag
gctgacatgtactgtgctgctcacatgaacggagtttgggagagaggacagatcagctct
gacgtcacatccagcgacatcgcagagttgatgcgctgtgaccatggcaacacggtgaag
ctgcatgtctgcaatctgcggacgctgccgtcctcgttgatgggctctctggcactggag
tgcactcttagcggcatcaggccagcaggaggccgatccacctggacggctacagcctgt
gatttattctcccactacttgaccggagcctcagctgtcatgactgtcaagaagttgaca
gatgagcgtccagtgcccgtcacactgttttgctccaacaggacgggacagtttgtcagc
attgcagactttttaaccagtgagggcctcgccctcagggaacgaaaaccaagaaatgct
gacgttcatgaccccaaagaaagtgatgcacagtctccagcgagggcgacacagactgaa
tgctctgacgacggcaacactcacccatctccctttcttaaacctacaccttctccgtcc
tcacacacgcctccaaaaccagccccccgcaccatcatgtctgctgagaaggtgacgact
aagttgtaccagccccctgagctgccgtgccccggtcacatccagataagtgtgtctgcc
atcagagaggacggtctcatttacggcagaacagagaatgcagagtgtcagctggagcag
ctcagagagaggattcaccagagcataaagacattacccagacctaagtcttacacctgg
aagtcagtcctgggctgcgccgtcattggacctgatatgttgtggtatcgaggacagctg
ctggaggtgctgggaggacacgttaaggtacagtacgtggactatggcctggtggagaac
atcccagtggtccatgtgtaccccatactgctgtgtgaagacgttcctcagctctgcatg
cccttccagctgcacaacgtcaaccctgttggtggtaagtggcaacaggatgcagttgcc
atgctgagggagatgttgctgaaccgcagtgtggacatagacatcatggagctgccgact
gacccaaggggacccctcacagttgagctcttcctggacgggctgagcctcagccagatc
ctgtgtcaccacgaacacgccaccatagaccagactgtatcaacaccaaagagactgatg
acgccagcctccctggatgactgggacatcgacaccgagggtctggagggcccacaggag
ccgttgctgggacccttcatctacccagacctgccacaggagggagagcactttccagtc
agggtcaagcacctgttgacccccaccgagttgttcctgtggcctcagagggagggagtg
gctgatgcggaggtggatggagagactctggatgaggcactaagcagaatcaatgcgaac
atcgacagtctgccacaactcaacagcttctcttgtggtgacatcagttcactgctgttt
ccaggcggtccgtgtctggcagagtacagtgatgggaattactaccgggccaagctgata
aggttcatcagtgcggagccgatcatggtcctggtccaacatgtggactttggctctgac
gacactctgcccatcaccaagctgcgtgagatgccggccgagctgctgcgatttccatca
cgggcgctcaaagtcaaagtcgccggctttaaggctccgagtgtcaggaacaggcaggaa
gacatgctgccctacagccctgagtggagcgtaaaggccacaatggagatgatcgacctg
ttaaacggcagaatcgaagccactgttgtggcccgggaaccagagctcacagtggtgctg
tacaatgaggatggagagctggtccatctgcctctggtgagcagcggactggccgagctc
gagtga
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integrated database retrieval system
