Larimichthys crocea (large yellow croaker): 104928678
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Entry
104928678 CDS
T04659
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104928678
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104928678
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
104928678
NCBI-ProteinID:
XP_010741320
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All DBs
Position
XVIII:3952414..3976433
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AA seq
931 aa
AA seq
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MGVKGHLEDGTGHILSLGLDLDYLHVEGAERQGGLSSALGAGNIGVLQVRTGAPNNSSNS
IGSSNTSFSTHSSYSSSSSCSNFSEESAVSDSDDERLHIGSQNPHQDQPPQTHHQGPSSV
CQTVRLDLSQNRSPGELPQPETSSPADPVTDYRTKVEFALKLGYSEELVLLVLRKLGPDA
LINDILGELVKLGTKTEMEQQGGSTVSQFTSSSLSSSLASSSTASSSNSSLDSCRLLCPS
QLLEDKENLRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQ
SRPDALITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNY
RDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPIIPEHRKQPC
PYGKKCTYGHKCKFYHPERGSQPQRAVADELRASAKISSVASRGLLEDALMVKSQSSCQP
GGMPEAEQSRGTPKKQPNVSPRNSFNDLLEDRLRVQSKVEGRRGSNSSSSSSSSSSFLGH
PTLGGLPLSGSLDRWEHPGGSGGGSSRVAGASGPSLAETYHRCESPDLGYSSMIKTYSTL
SLVVPQSPECFFPADLRAGSLLSDCSSEGSVSSDSFSPDPLLDDGPKCHHHHHHPHHHHH
CSSQYPPHPVSRVPPGLGQHTPHGYPVSQALRRPHGFGLEDPPSSVTSHASPRPFKPTSA
YIQPHPQHPLLSNYPVEFQTRPPRPPQTSTAHSHSQSSPLVMGSLWQEGGLQDSQMYKGS
PLLSRRNHTGLNPQPQHQMNWDPHPQQSPKPCYDLFTFHSLPEIHEKPWHSPWDRQALSS
PRGISASSVPPLPQLSLPSITTHKSHLPSVPQHQEPPALGHYQDLRERVFVNLCRIFPPD
LVRMVMTRNPHVMDAQELAAAILMEKSQRGS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaagggccatctggaggatgggacaggccacatcctcagcctggggctggat
ctggactacctccatgtagaaggtgctgagcggcagggtggcctgagcagtgcattaggt
gctgggaatataggggtcctacaggtcagaactggtgccccaaataacagcagcaacagt
attggtagtagtaacactagttttagtactcattcaagttatagtagcagtagtagttgc
agtaacttttctgaggagagtgctgtctccgacagtgatgatgaacgacttcatattggg
tctcaaaacccacaccaagatcagccacctcagacacatcaccaagggccctcctcagtc
tgtcagacagtcagactagacctctcacaaaatagatcccctggagagctcccacagcca
gaaacatcatctcctgcagaccctgtcactgactaccgcaccaaagtggagtttgctctc
aagctgggctactccgaggagttagtgttgctggtgctgaggaaactgggtccagacgca
ctcatcaatgacatccttggagagctggtcaaactgggaaccaagacagagatggagcag
cagggaggttcaactgtctcacagttcacctcctcctctttgtcatcctctttggcctcg
tcttccaccgcctcctcctctaactcctctctggactcctgtcggttgctgtgtccgtcg
cagctgctggaggacaaagaaaaccttcggcctgttgtggtggatggaagcaatgtagct
atgagtcatggaaataaggaagtgttttcctgtcaaggcatccagctggctgttgattgg
ttcttggagcgaggtcaccgtgacatcactgtttttgtccctgcctggagaaaggaacag
tcacgacctgatgctctcatcacagaccaagagatcctacggcggctagagaaagagaag
atcctggtctttactccatctcgccgtgtgcaagggcgccgtgtggtatgctatgatgac
cgcttcatcgtcaaactggcctatgagtcggacggcatcattgtttccaatgacaactac
cgtgacctagccaatgagaagccagagtggaagaaattcattgatgagcgtctgctgatg
tactcctttgtaaacgacaagtttatgccaccagatgacccactgggacgccatggaccc
agtctggaaaacttcttgaggaagaggcccataattcctgaacacaggaaacagccatgt
ccttatgggaagaagtgcacatacggacacaagtgcaaattttaccaccctgaaagggga
agccagccccagcgtgctgtagctgatgagctgcgtgccagtgccaaaatttcatcagta
gcatccagaggcctgctggaagatgccctgatggtgaagagccaaagttcttgtcaacca
ggaggaatgcctgaggcagagcaaagtcggggcactccaaagaaacagcctaacgtcagc
cctcggaactccttcaatgacctcctggaggacaggcttcgggtccagtccaaagtggag
ggacgaaggggaagtaacagcagcagcagcagtagctctagcagtagttttctagggcat
cctactctagggggactccctttatcaggaagtctggaccgatgggagcaccctggggga
agtggtggaggaagctccagggttgctggagcctcaggaccaagcctggctgaaacttac
cacagatgcgagtctcctgatctgggctacagctcaatgataaagacctattctaccctt
agtctggtagtaccacagagtcctgaatgcttcttcccagctgatctgcgagctggatca
ctactgtcagactgtagcagtgaaggcagtgtcagctcagactctttctcccctgacccc
ttgttagacgatggccccaagtgccatcatcaccaccaccatcctcaccaccatcatcac
tgctctagccagtaccctcctcatcctgtaagccgtgtccctcctggtctgggccaacat
acaccccacggctatcctgtttctcaagcactgcggagaccacatggttttggcctggaa
gaccctccatcttctgttacctctcatgcatctccacgtcccttcaagcccacttcagcc
tacatacaaccccaccctcagcatcctttgctgagcaattacccagtggaatttcaaact
cgcccaccacgtccaccccaaacatccactgctcattcccactctcagagctcccctctg
gtgatgggctccctttggcaggaaggagggctccaggactcccaaatgtacaaagggtca
cctcttctttccagaagaaaccacactgggctaaacccacaaccacagcatcagatgaac
tgggatccccatccccagcagtctcctaagccttgctatgatctattcactttccatagc
cttccagaaatccacgaaaagccttggcactctccttgggacagacaagccctttcatca
ccccgtggcatttcagcatcaagtgttccaccacttccacagctgtcccttccctccatc
actacccacaaaagccacctgccgtcagtgccccagcaccaagagccacctgccttgggt
cattaccaggaccttagggagagggtgtttgttaacttgtgccgcatcttccctccagat
ttggtgaggatggtgatgaccaggaaccctcatgtgatggatgctcaggagcttgcagct
gcgatattaatggagaaatcacagcgcggttcttga
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