Larimichthys crocea (large yellow croaker): 104928835
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Entry
104928835 CDS
T04659
Name
(RefSeq) sodium/calcium exchanger 1 isoform X2
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04020
Calcium signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
lco04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
104928835
04020 Calcium signaling pathway
104928835
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104928835
04261 Adrenergic signaling in cardiomyocytes
104928835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104928835
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104928835
Transporters [BR:
lco02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
104928835
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Others
104928835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Motif
Other DBs
NCBI-GeneID:
104928835
NCBI-ProteinID:
XP_010741490
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All DBs
Position
III:22915577..23048879
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AA seq
945 aa
AA seq
DB search
MGRWDHSSLLSPGLRLAVVTVILLLKLHPSLAGAPPEPNLGGSVSAVSTNKTECSKPEAC
ARGVILPIWEPQNPSFGDKVARATVYFVALVYMFLGVSIIADRFMASIEVITSQEKEITI
KKPNGETTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVIGHGFNAGTLGPSTIVGSA
AFNMFVIIGLCVYVVPDGETRKVKHLRVFFVTATWSIFAYIWLYLILSVISPGVVQVWEG
LLTFFFFPICVLFAWVADRRLLFYKYVYKRYRTGKQRGMIIETEGDRPLPSKVDIEMDGK
MLNSHGVDFLDGPLGLDLDEKDLDEEETRRDMAKILKELKQKHPDKEVEQLIELANYQVL
SQQQKSRAFYRCQATRLMTGAGNILKKHAADQARKAVSMHEVRSDAGDNDPISKVLFEPG
SYQCLENCGTVAVNVVRRGGDLGKTISVEYRTEDGTANAGSDYEFTEGVVVFKPGETVKE
IRVGIIDDDIFEEDENFLIHLSSVKVLTSEGEEPEEGESANHVDSVACLGLPSTATVTIF
DDDHAGIFTFEEPVCHVSESVGTMEVKVLRTSGARGVVMLPYKTVEGTARGGGEDFEDTH
GILEFQNDEIFKTIKVKVIDDEEYEKNKTFYVEIGEPRLVESNDTKEDQKKEEEEEEEPL
AGKDEEERRIAEMGRPMLGDHVKLEVIIEESYEFKNTVDKLIKKTNLALLVGTNSWRDQF
IEAITVSAGEDDDDEECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVSI
CMIGLLTAVIGDLASHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASIG
NVTGSNAVNVFLGIGVAWSIAAIYHNSNGREFKVDPGTLAFSVTLFTIFAFISVATLMYR
RRPEIGGELGGPRTSKVLTTMLFFSLWLLYILFSSLEAYCHIQGF
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctgggatcactcctccctcctgtcccctggcctgaggctagcagttgtcaca
gtgattctcctcctcaagctccatccctcattggctggcgctccccctgagccgaactta
ggtggctccgtttcagcggtgtccacaaataaaactgaatgcagcaagcctgaagcatgt
gcaaggggggtgatcttacctatctgggagccccaaaatccgtcatttggtgacaaggta
gcccgggcaacagtttactttgtggctctagtctacatgttcctgggtgtgtcaatcatc
gcagaccgcttcatggcgtcaatagaggtcatcacatcacaggaaaaggagatcaccatc
aagaaacccaacggggaaaccaccacgaccactgttcggatctggaacgagaccgtctcc
aatctcaccctcatggctctgggctcttcagctcctgagatcttgctgtccgtcatagaa
gtcataggtcatgggttcaacgctggcacactgggcccctccaccattgtgggctctgca
gcgttcaacatgtttgtgatcatcgggctttgtgtgtacgtcgtgcccgacggcgagaca
aggaaggtcaagcacctccgcgtcttcttcgtcacggccacctggagtatcttcgcctac
atttggctctacctgatcttgtccgtgatctcgcctggcgttgtgcaggtctgggagggg
ctcctcacgttcttcttcttccccatctgtgtgttgttcgcctgggtggctgaccgtcgc
ctgctgttctacaagtacgtgtacaagcgctaccgcaccggcaagcagcgtggcatgatc
atcgagaccgagggagaccgtccacttccttccaaggtggacattgagatggatgggaag
atgctgaactctcatggtgtcgacttcttggatggtccgctgggtttggatctagatgag
aaggatctggatgaggaggagaccaggcgagacatggccaagatcttgaaggagcttaaa
cagaaacaccctgacaaagaggtggaacaactcattgagcttgccaactaccaagtcctg
agccagcagcagaagagccgtgctttctatcgatgccaggccactcggctgatgacaggt
gctggcaacatcctgaagaaacacgcagccgatcaggcacgaaaggctgtcagcatgcac
gaggttcgctctgatgctggtgataacgatcccatctctaaggtcctttttgagcccggt
tcctaccagtgccttgaaaactgcggcacggtggcggtgaacgtggtgcgacgtggtggc
gatctgggcaaaacgatttccgtggagtaccgcacagaagatggcacggctaatgctggc
tcggactacgagttcacagaaggcgtcgtggtcttcaagcccggcgagacggtgaaggag
atccgcgtgggaatcattgacgatgacatctttgaagaggatgaaaacttcctgattcac
ctttccagtgtcaaggtgctgacgtcagaaggcgaggaacccgaggaaggcgagtcagcc
aatcacgtggactcggtggcgtgtctcggcttaccctccacagcaaccgtgaccatcttt
gacgacgaccacgccggcatctttacgtttgaggagcctgtatgccacgtgagcgagagt
gttggcaccatggaggtgaaggtgctgagaacgtcgggggctcgcggcgttgtcatgctg
ccgtacaagacggtggagggaacagcacgaggaggcggggaggacttcgaagacactcac
ggcatcctggaatttcagaacgacgaaatcttcaaaaccatcaaggtgaaagtcatcgac
gacgaggagtacgagaagaacaaaaccttctacgtggagatcggagagcctcgcctggtg
gagagcaacgacaccaaagaggatcaaaagaaggaagaggaggaggaagaagagccgctg
gcaggaaaagatgaagaggagaggcgcatcgccgaaatgggccgtccgatgctgggtgac
cacgtcaaactggaggtcatcatagaggagtcatatgagtttaagaacacagtggacaag
ctgataaagaagaccaacctggctctgctggtaggaaccaacagctggagagaccagttc
atcgaagccatcactgtgagcgcaggcgaggacgacgacgatgaggagtgtggagaggag
aagctgccgtcatgtttcgactacgtcatgcacttcctcaccgtcttctggaaggttctg
ttcgccttcgtcccgccaacagactactggaacggctgggcctgcttcgtcgtctccatc
tgtatgatcggactgctcaccgccgtcattggggacctggcctctcattttggctgcaca
gtgggcctgaaagactcggtcacagcagtagtatttgttgcgttgggaacctctgtgcca
gatacctttgccagtaaggtagctgcgatccaggatcagtatgctgacgcatccatcggc
aatgtgacaggctccaacgctgtcaatgttttcctgggcatcggggtggcgtggtccatt
gctgccatctaccacaatagcaatgggagagagttcaaggtagatccaggcacactggcc
ttctccgtcacactcttcaccatctttgccttcatctccgtcgctacactgatgtaccgg
cggcgaccagagatcggtggagagctgggcgggccccggacttcgaaggtcctgaccacc
atgctgttcttcagcctgtggctcctctacatcctcttctcctcgctggaggcctactgc
cacatccagggcttctaa
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