Larimichthys crocea (large yellow croaker): 104928915
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Entry
104928915 CDS
T04659
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104928915 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104928915 (bard1)
04121 Ubiquitin system [BR:
lco04121
]
104928915 (bard1)
03036 Chromosome and associated proteins [BR:
lco03036
]
104928915 (bard1)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104928915 (bard1)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104928915 (bard1)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104928915 (bard1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104928915 (bard1)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104928915 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_3
Ank_4
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-RING_10
PTCB-BRCT
zf-C3HC4_3
Ank_KRIT1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
104928915
NCBI-ProteinID:
XP_027146846
LinkDB
All DBs
Position
XVIII:complement(10593030..10617276)
Genome browser
AA seq
794 aa
AA seq
DB search
MDNEVLVQTSDWKNTKEAVANFRRLLLCSKCSDLMTDPVCLGLCEHMLCRSCAGPRAGDG
CVVCNSPAWVKDIQINRQLSSIIQLFSGLESLLNPREQPDSSLAEIRTQPQSPVFKNKKN
FKIWFSPRSRKVRCMVDKPSEVIVPENRSSEETTAAQPDTITSHHQDLSVFNFTSSSQDS
GSSCSERCKNEKTNGKRSTKKNAASRKVLVQKTTRTTQKKNEQKMKKNRLEAINQQWGIT
EEVSALKGKEDSCAEETRRSSKRVSFLSPAVTSDEPQPKVPQGSTNGLSPGRSTLRESLS
RSSTVLNDQTLPGQSVSDSVVRHDKLSTNGTSPTDNPEKQDKVSPPKHSSKRSRVEEKVS
TLETTPKRPRVSPGRRRRSLMSPAVLSSSSMASPRCDKTIRKQQGDSPSVLATVGRKSPS
SPRSPAVMKRNHKGETLLHLAAIKGDVEAVKELLDQGVDPNLKDNAGWTPLHEACNLGHL
AVVEVLVSSGVLLNTPGYKNDSPLHDAVRNGHPAIVKVLLQHGASQHVLNLHGKRPADYA
VSVEMLEIFQEASKGTQYADTSLDPSGSFSAMSDCAKRDEMMVFLASRLSQTEQHQLAKL
GELLGGRIADTFSGSVSHVVLPEGQMPTTYSTLLGLLAGCWLVKFSWVDACLQAGEWMPE
TEHEAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKGPSKDELIRLLREGGGQLLSRQPK
PDSDVTQTLNAAAYHALPGSDQALCTQYIIFDHQGPHKPAVVRRGKVWSAPSTWIINCIA
AFRLLPVPEPQTLV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaagtcctcgttcagacaagtgactggaagaacactaaggaggcggtggcg
aactttcgacgactgctgctctgctccaaatgctcagatttaatgacggaccccgtgtgt
ctgggactatgcgagcatatgctgtgcaggtcctgtgctggccctcgggcaggagatggc
tgcgtggtgtgcaacagtcctgcgtgggtgaaggacatccaaatcaacaggcagctcagc
agcatcatacagcttttctctggtttagagtccctactcaatcccagagaacaaccagac
tcgtctctagctgagattcgaacacaacctcagagccctgtctttaaaaacaagaagaac
ttcaagatctggttcagtcctcgcagtcgaaaggtacgatgcatggtcgacaagccttca
gaggtcatcgtaccagaaaacaggtcttctgaagaaacaactgcagcacagccagacaca
attacttctcaccatcaggacctctcagttttcaattttacctcgtcctcccaagactct
ggctcctcttgttctgaaagatgcaaaaatgaaaagacaaatgggaagaggtcaactaag
aaaaatgctgccagcaggaaggtgttagtgcaaaagaccacgaggaccacacagaagaaa
aacgagcagaagatgaagaagaacagactggaggccataaaccagcaatgggggatcaca
gaggaggtcagcgccttaaagggaaaggaggattcctgtgctgaagagacacggaggtcc
agtaagagggtttccttcctaagccctgctgtcacgtctgacgagcctcagcccaaagtg
ccacaggggagtactaatggactcagccctggcaggagcaccctgagagagagtctctca
agaagcagcactgtactaaatgaccaaaccctgcctggtcagagtgtgtcagacagtgtt
gtgaggcatgacaaactgtctacaaatggcaccagcccaactgacaatcctgaaaaacag
gacaaagtatctcccccaaagcattcctcgaaacgatccagagtggaggagaaggtctcc
acattggagaccaccccaaaaaggcccagggtttccccgggcaggaggagaaggtcactg
atgtccccagcggtccttagctcttcatctatggccagccccaggtgtgataagaccatc
agaaaacagcaaggagacagcccctctgtcctagctactgttggcagaaaatctcccagt
tctcccaggagccctgcagttatgaagaggaaccacaaaggagagaccctgctgcatcta
gctgctataaagggagatgtagaggctgtcaaagaactgctggaccagggggttgaccct
aacctgaaggataatgctgggtggacacctctgcatgaagcatgtaacctgggtcaccta
gcagttgtggaggtgttggtctcaagtggtgtcctgttgaatacacccggctataaaaat
gactctccactccacgacgctgtgaggaacggacacccagccattgtaaaagtcctgctg
cagcatggagcctcgcagcacgtactgaatctgcatggaaagcggcctgcagattacgca
gtgagtgtggagatgctggagattttccaagaagcctcaaaaggaactcaatatgctgat
acatctctcgacccctcaggcagtttctctgcgatgagcgactgtgcgaagagggatgaa
atgatggtgtttctggcgagcaggctttcacagacagaacagcatcaactggccaaactg
ggagagctcctgggaggcaggatagctgacaccttttctggctcagtgagccatgtcgtg
cttccagaaggacagatgcccaccacctactccacccttctgggtcttctcgctggctgc
tggcttgtcaaattcagctgggtggacgcatgtttgcaggcaggcgagtggatgcccgaa
actgagcacgaagcgggagaaggcccccagcgcagtcgcatcaacagatgtagcttgctc
ccaccgctcttcgatggctgtttcttcttcctccttggctccttcaaggggccctccaaa
gacgagctcatcaggttgctccgggagggaggaggtcaactcctgagccggcagcccaag
cctgacagcgacgtgacgcaaaccctgaatgccgccgcctaccatgcactgccaggctcc
gaccaggccctctgcacccagtacatcatctttgaccaccagggccctcacaagccagcg
gtagtgaggcgaggtaaggtgtggtcagctccctccacgtggatcatcaactgcatcgca
gcctttcgcctcctccccgtgccggaacctcaaacactggtctaa
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