Larimichthys crocea (large yellow croaker): 104928941
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Entry
104928941 CDS
T04659
Name
(RefSeq) heat shock cognate 71 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
lco04010
MAPK signaling pathway
lco04141
Protein processing in endoplasmic reticulum
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104928941
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104928941
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104928941
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104928941
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104928941
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104928941
03009 Ribosome biogenesis [BR:
lco03009
]
104928941
03110 Chaperones and folding catalysts [BR:
lco03110
]
104928941
04131 Membrane trafficking [BR:
lco04131
]
104928941
03051 Proteasome [BR:
lco03051
]
104928941
03029 Mitochondrial biogenesis [BR:
lco03029
]
104928941
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104928941
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104928941
Spliceosome [BR:
lco03041
]
Complex B
Other components
Prp19 complex
104928941
Complex C
Prp19-CDC5 complex
104928941
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104928941
Chaperones and folding catalysts [BR:
lco03110
]
Heat shock proteins
HSP70 / DNAK
104928941
Membrane trafficking [BR:
lco04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104928941
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104928941
Proteasome [BR:
lco03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104928941
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104928941
Exosome [BR:
lco04147
]
Exosomal proteins
Proteins found in most exosomes
104928941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Ppx-GppA
Hydantoinase_A
CRIC_ras_sig
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
104928941
NCBI-ProteinID:
XP_027136390
LinkDB
All DBs
Position
VII:complement(21789640..21794785)
Genome browser
AA seq
646 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
LNPNNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVINDASRPKVKVEYKGETKTFYPEEIS
SMVLIKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FISEFKRKFKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRA
RFEELNADLFRGTLEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGKDLN
KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELVGIPPAPRGVPQIEVTFDI
DANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAERYKAEDDVQRDKVTAKN
ALESYAFNMKSTVEDEKLKDKISDEDKKKIVDKCNEIISWLDRNQSAEKDEFEHQQKELE
KICNPIMTKLYQSAGGAPGGMPGGFPGAGGAPGGGASSGPTIEEVD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagggaccagctgtcggcattgatctgggcactacctattcctgtgtaggagtg
tttcagcacggcaaagttgaaatcattgccaatgatcagggaaacaggaccacacccagt
tatgttgccttcaccgacaccgagaggctgattggggatgcagccaagaatcaggtggcc
ttgaaccccaacaacacagtattcgatgcaaagcgtctcatcggacgtcggtttgatgac
agtgttgtccagtcggacatgaagcactggccatttacagtcattaatgatgcctcacgc
ccaaaagtaaaagtggagtacaagggcgagaccaagaccttctaccctgaagagatctcc
tccatggtcttgattaaaatgaaggagattgcagaggcgtacctcgggaagactgtaaca
aatgctgtagtgaccgtgcctgcctacttcaatgactctcagcgccaggctaccaaagat
gcagggaccatttctgggctgaatgtgctgcgtatcatcaatgaaccaactgctgctgct
attgcttatggccttgacaaaaaggtcggatctgaaagaaacgtcctcatctttgacctg
ggtggcggcacctttgacgtctccatcttgactattgaagatggcatctttgaggtcaag
tccacagcaggcgacacacacttgggtggagaagactttgataaccgcatggtcaaccac
ttcatctcagagttcaaacgcaagttcaagaaagacatcagcgacaacaagagggcggtg
cgtcgcctgcgcacggcatgcgagagggccaagcgcaccttgtcgtccagcactcaggcc
agcattgaaatcgattctctgtacgaaggagttgatttctacacctcaatcaccagggcc
cgcttcgaggagctgaacgcagacctgttccgtggaaccctggagcctgtggaaaagtcc
ctccgcgacgccaagatggacaaggcccaaatccatgacattgtcctggtgggaggttca
actcgaattcccaagatccagaagctgctgcaggactttttcaatggaaaggacctcaat
aagagcataaacccagacgaagcagtggcctacggtgcagctgtgcaggcagccatcctg
tcaggcgacaaatcagagaatgtgcaggacctcctcctgctggatgtgacccccttgtct
ctgggtatcgagactgctggaggagtcatgactgttctcatcaagaggaacaccactatc
cccaccaagcaaacccagactttcaccacctactcagacaaccagcccggtgtgctcatt
caggtgtttgagggtgaaagagctatgaccaaagacaacaaccttttggggaagtttgag
ctggttgggatccctcctgctccacgcggcgttcctcagattgaggtgacctttgatatc
gacgccaacggcatcatgaatgtttctgcagtcgacaagagcaccgggaaagagaacaag
atcacgattaccaacgacaaaggtcgcttgagcaaggaggacattgagcgtatggtccag
gaagcagagaggtataaggctgaggatgacgtgcagagagacaaggtgactgccaagaat
gctcttgagtcttacgccttcaatatgaagtccactgtggaggacgagaagctgaaggac
aagatcagcgacgaggacaaaaagaagattgtggacaagtgtaacgagatcatcagctgg
ctggatagaaatcagtctgcagaaaaagacgagtttgagcaccagcagaaggagttggag
aagatttgtaaccccatcatgaccaagctgtaccaaagtgctggtggagctcctggaggg
atgccaggcggcttccccggagctggtggtgctcccggaggaggagcgtcttccggcccc
accatcgaggaggtcgactaa
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