Larimichthys crocea (large yellow croaker): 104928987
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Entry
104928987 CDS
T04659
Name
(RefSeq) uncharacterized protein LOC104928987 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104928987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104928987
Membrane trafficking [BR:
lco04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
104928987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
104928987
NCBI-ProteinID:
XP_019130563
LinkDB
All DBs
Position
XVI:complement(23535254..23616380)
Genome browser
AA seq
1638 aa
AA seq
DB search
MSQSGKVLHLYVEVRSAPDQKGGKVAFGEHKEGIAQGHSVQDNPTELLSQLASQTTCQTI
TKTSTTHRLVQDCTHRQSPSRNTVSFQLQQAGSSPTVNKRWSAPCDEVSAVHSSPMTSAG
KVPLPHTPPNCRRFKEEEVCDGKRSVVTFSYIEKSNVKTLDSPRNSVCERGTREEKSTPS
HFRKRLSDPVWFGSPDSSCSSSPKLTFRSPGSHQQTFSPGLRQPHLDPIGRAATQRAVEE
FGSPLLRIKLAHALEHTSSSRYNQQPRCQSWAGSPVQRQYISVNPKDQIIDRSPVVYGLP
RSPASDQLSSQSRRSPHSKPEFCAESQIPRHWSGEDRAKAGSPATKRHVHRTCNRSSSPQ
GAILQLGNNVIEGLNQLSDSKSSSPAHSPEVARRLAEEATKVSSIFTEARRSSLHNALGE
PASGSNSGEFHNSTSNAQQSKQTLKMNIPLNDQHTPATDNTDSHQPENSILQSQSLETNS
HNNSETHQDECIQKSQQHSSVLSAAPSSPAIPSRVLRPSHPPTELSSPMRDPRLFQADLR
TPETPTLHRRRQLPQYTRDSWSPSLDKRGDLSCFERGDCTELARRLFINQSVEEAPVSWT
SRQQWGNQVENSPRASPEPGCRSGSNQIAGRQASQRHRPLSPTAQQKRAEQRRREILLLG
PVVLDSPEEDEGCEEEGQGNEMEAFGERQQPRLQRVEEPAEVEQNGAMGGSSSRSSSGVT
GSLGDRDCVSPESSQSSHQSNETGAATSGIQTDSGCAVPVPSLHCQRIARAKWEFLFGTP
AEEAASRGEKNFLEASTAPPSGNSSESPTPTPPSSLPLLSANHEVQHVEVELVTPPPAII
GTSPKTGIIRRTLKYSETDLDAVPLRCYRETDIDEVLLAEQDDADSAFGSNRSVQGNSPS
SPLRGLGRRRGREDEEDEEEEEEEEEEMVSWASVRMQGDNRKQQYAAQEEPEVFGHLLKR
PMETFFDNHHPALKSPILVSGPRCAAEDTFSRHFESIMESHRAKGTSYNSLDSEELLTSS
TQTVLTFDLPTLTPAIHAPVCQSARQIVQLSFAPLAHDERPSLSDSIFTVTGDSDATRAP
SSERLSSGSDDTPPRGRDCTQLGSSWYSNISFSLPSSREKARLATDSELDQDLSDRLGLE
SSETLTNGSHHADVAAAKRLAKRLFNLDGFRKSDVARHLSKNNEFSRMVAEEYLSFFNFT
GLGLDQALRTFLRQFALMGETQERERVLSHFSKRYLDCNPRVMPSEDAVHTLTCALMLLN
TDLHGQNIGKRMSCTQFIGNLEGLNGGQDFHKDLLKALYNSIKNQKLQWTLDEEELRKSF
SELGDSLCDSNASRSMKRVGSSGKPLSDVTEPSGSLLYKNGFLVRKVHADSDGKRTPRGK
RGWKTFYAILKGLILYLQKGEYRPDKQLSEEDLKNAVSIHHSLAMKASDYSKRPNVFYLR
TADWRVYLFQAPNAEQMQSWITRINTVSAMFSAPPFPAAIGSQKKFSRPLLPGTMSKLSE
EEQVRSHEARFRTLSTELAELRSYPPDRKVKGRELEEYRQRDEYLEFEKTRYGTYVMLLR
AKIRSGEEDLSVFESQLLEDNGLQRAHSSPTLQDSSQASQISQASSARDGGNSSKASGCS
SKPRQEGQRHSYRQAVKK
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtctggaaaagtccttcatttgtatgtggaagtgaggtctgccccagatcag
aagggagggaaagtagcgttcggagaacacaaggaagggattgctcaggggcattcggtt
caggacaatcctacggagctcctttctcagctagcgagtcagacaacctgccagaccatc
accaagacctccacaactcaccgtctggttcaggattgtacacacagacagtctccttcg
agaaacactgttagctttcagctccagcaagccggcagctccccaacggtcaataaacgc
tggagtgcaccctgtgatgaagtgtctgccgtccactcttcaccaatgacctctgctgga
aaggtccctctccctcacacacctcccaactgccggaggttcaaggaggaagaagtctgc
gatggaaagcggtcggtagtcaccttcagctacattgagaagtccaatgtgaagaccttg
gacagtccacgcaactctgtgtgcgagagaggcaccagagaggaaaaatccaccccctct
cactttcggaaaaggctcagcgacccagtttggtttgggagtcccgattcatcgtgcagc
tccagtcccaagctgactttccgatctccgggaagtcaccagcagacgttctctcctggc
cttcgtcaaccacacttggaccccatcggcagggcagctacccagagggctgtggaggag
tttggctcccctctactgaggattaaactagcccatgcacttgagcatacctcatcctca
cgctataaccaacagccacgctgtcagtcctgggctgggtctcctgttcagcgtcagtac
atcagcgtaaaccccaaagaccagattatcgataggagcccggttgtttacgggctgcct
cggagcccggcatcggaccagctatcctcccagtccagacggtctcctcactcgaagcct
gagttctgtgccgagtcccagatcccacgtcactggtcaggagaggacagagctaaggct
ggcagtccagccaccaaaagacatgttcacaggacctgtaacaggagctcttcaccacag
ggggcaatactccaacttggcaataatgtaattgagggcttgaaccagttaagcgatagt
aaatcttcctctccagctcatagtcctgaagttgcccgcaggctagcagaggaagctacc
aaagtatcttcgattttcacggaggcaagaaggtcctcgttgcacaacgctttaggtgag
cctgcaagcggctcaaactctggagaatttcacaattcaacttcaaatgcacaacagtct
aagcaaacgcttaagatgaacatccctttaaatgaccaacacacgccagcaaccgacaac
acagactctcaccagcctgaaaactctatcttgcagtcgcagtcacttgaaacaaactcc
cataataattctgaaacacaccaggacgagtgcattcagaaatcccagcaacatagttca
gttttatctgcagctccgagctcccccgccattccttcacgtgttctccgtccttcacat
cctcccactgagctaagctctcccatgagggaccccaggctattccaagcagacctccga
acaccagaaaccccaaccctgcatcgccgtcgtcagctcccacaatacaccagagactcc
tggtccccgagcctggacaagaggggagacctgagctgtttcgagagaggggactgcaca
gagctcgctcgcaggctctttatcaatcagagtgttgaggaggcaccggtcagctggaca
tccaggcaacagtgggggaatcaggtggagaacagtccgagggcaagccctgagcctgga
tgtaggtccggcagtaaccaaattgctggtcgtcaggcaagtcaacgccacagaccgctc
agtcccactgcccagcagaaacgggctgagcaaaggaggagggagatcctgcttcttgga
ccggtggtgctggactctccagaggaggatgagggttgcgaagaggaaggacaagggaat
gagatggaggcatttggagaacggcaacagccacgcctgcagagggtcgaggaacctgca
gaggtggaacagaatggagcgatgggagggtcgtcctcgcggagctccagcggggtgacc
ggcagcttgggcgacagggactgtgtgtccccagagtccagtcagtccagtcaccagagc
aatgagaccggggctgccacctcaggaatacagacggacagcggctgtgcggtgcccgtg
ccctcgctccattgtcagaggatcgctcgtgccaagtgggagtttttattcgggaccccc
gctgaggaagctgctagcaggggggagaaaaattttctggaagcctccacagctcctccc
agtggtaactccagtgagtctcccaccccgactccaccttcatccctgcctctgctttcc
gccaatcacgaggtgcagcatgtggaagtagagctggtgacccctccaccagccatcatc
ggcacgtcgcccaaaaccggcatcatccgccgcacgctaaagtattcagaaaccgacctg
gacgccgtcccactacgctgctaccgcgagacggacatagacgaggtgctgctggccgag
caggacgacgcagactctgcgtttgggagtaatcgcagcgtccagggcaactcacccagc
agcccgctgaggggtctggggaggagaaggggaagggaggacgaggaagatgaggaggag
gaggaggaggaagaggaagagatggtgagctgggcaagtgtgaggatgcaaggagataac
aggaagcagcagtatgcagctcaggaagagccggaggtgtttggtcaccttctgaagaga
ccgatggaaacattttttgacaaccaccacccagccctgaaatcccccatcctggtctct
ggtcctcgttgcgctgcagaggacaccttcagccgccactttgagagcatcatggagtct
caccgagccaaagggacgtcgtacaacagcctcgacagcgaagagctgctgacctcgagc
acccaaaccgtcctgacctttgacctgcccacgctaacccctgcgatccacgctccggtt
tgccagagcgccaggcagatcgtccagcttagcttcgccccgctggcgcacgatgagagg
ccaagtctctctgattctatctttaccgtcactggggactcggacgccacccgagccccg
tccagcgagaggctgagcagcggttcagacgatacaccgccccgaggacgagactgtaca
cagctggggagcagctggtacagcaatatttctttctcattaccaagcagcagggagaag
gcccgcctggcgacagattcggagctggaccaggacctgagtgaccggctgggtctggag
agcagcgaaaccctcacaaacggcagtcaccatgccgacgtggcagccgccaaacgtcta
gccaaacgtctcttcaacttggatggtttcaggaagtccgacgtggcgcgccacctcagc
aagaataatgagttcagccgtatggtagcagaagagtatctgagtttcttcaacttcaca
ggcctcggtcttgaccaagcactgcggactttcctcagacagtttgccctgatgggggag
actcaggagagggagagggtgctgtcacacttttctaagcgttacttggactgcaaccca
agagtcatgccatcagaggatgcagttcacactctcacctgtgccctcatgctgttgaac
actgatctgcacggtcagaacatcggcaaaaggatgtcgtgtacgcagttcattggcaac
ctggaaggactgaacggcggccaagatttccacaaggatctgcttaaagcgctctacaac
tcgatcaagaatcagaagctgcagtggacactcgacgaggaagagctgcggaagtcgttc
tcggagctcggggacagcctgtgcgactccaacgcctccagatcgatgaagcgggtgggc
agcagtgggaagcccctgtcagatgtgaccgagccctccggatcgctgctctacaagaac
gggttcctggtccgcaaggtccacgccgactcagacggcaagagaacgccaagagggaag
cgaggctggaaaaccttctatgccatcctaaaagggctcatcctctacctgcagaaaggg
gaatacaggcccgataaacagctatctgaggaggacctgaagaacgccgtgtccatccac
cactctctggccatgaaggcttcagactacagcaagaggcccaacgtgttctacctgcgg
acggccgactggagggtgtatctcttccaggcaccgaacgccgagcagatgcagtcctgg
atcacacggatcaacacggtttccgccatgttctcagctcctcccttcccggcggccatc
ggctcccagaagaagttcagccggccgctgctgccggggacgatgtcgaagctgtccgag
gaggagcaggtcagatcccacgaagctcgattcagaaccctctccaccgagctggccgag
ctgcgctcataccctcctgaccgcaaggtcaaagggcgcgagctggaggaataccgccag
cgtgacgaatatctggagtttgagaaaacacggtatggaacctacgtcatgctgctgcga
gctaaaatccggagcggcgaggaggacctgtccgtgttcgagtcccagctcctggaggac
aacggcctgcagagggctcactccagccccacgctgcaggacagcagccaggccagccag
atcagccaggccagcagcgccagggacgggggcaacagcagcaaagccagcggctgcagc
agcaaacctcggcaggaaggccagagacacagctaccggcaggccgtcaagaagtga
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