Larimichthys crocea (large yellow croaker): 104928993
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Entry
104928993 CDS
T04659
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104928993 (caskin1)
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
104928993 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_5
Ank_4
Caskin1-CID
SAM_2
Caskin-Pro-rich
Ank_3
Caskin-tail
SH3_2
SH3_1
SAM_TNK
SH3_9
Motif
Other DBs
NCBI-GeneID:
104928993
NCBI-ProteinID:
XP_027140701
LinkDB
All DBs
Position
XII:12259720..12369254
Genome browser
AA seq
1652 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQKLLQRPRPGKAKLLGSAKKVNVNFQDTDGFSPLHHAALNG
NLELITLLLESQAAVDIRDQKGMRPLHYAAWQGKAEPMKMLLKSGSSVNGQSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPK
KGDTTDPNGTSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTEAVRLL
LDSGINATVRNTYSQTALDIVYQFTATQASREIKQLLRGRMDGSVDWDASAALQVRALKD
YCNNYDLTSLNIKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSTMVEVISKRTGL
ASTVICTQQFQKIPLVPPATVAPANAVVNGNDTTFHQIHILPPPPPPPPHSHQPLLPLFT
SFGYNKSPVTTPQGDTPTAPGCRGSEASPHSSPTPSSGPHGGSNEEIWVLRKPVAGGDRS
SVGSSGSVTSVRSSGSGQSAGSAAHILHAQAEGVKLLATVLSQSAKAKEHLLEQSKSVEQ
PPAGSAGSSRTSSQSGCPLHEAPPYEATATRKGEGPGEGKSSEAVVQWLSDFQLQVYAPN
FLGAGYDLPTISRMTPEDLTAIGITKPGHRKKMTSEINKLSVTEWLPEQKPANLGEWLSA
IGLSQYHQVLVQNGYENIEFITDITWEDLQEIGITKLGHQKKLMLAVKRLAEMQRSSEGR
GSLRKKPPPITQQQEVMSMDSPPPDELMSPKMSTFQDSELSTELQSAMTQPGQEVSKAQR
TRNLSKDHDEVIGGGGGGGGGGGGAVPPKKEARTMRQQSSQGSTSSHRSSASSQGKHRHS
HSHSQPAPPYTPPHTPTKTRTSSSSSTSSAQSTASPQAKHKPSPPFIQGERPQSPRSHPP
QSPTHRGAPCAQQQQPQQQQQPQVQPQHQAHPQHHPQTQVMEVRENQQPQVPLLCLPPEA
ELAEGEGAEPSALQKKRAHSLNRYAVSDGECDEKPRGGGGGGEGEAEVAGCQGPAVARPE
GGKYATVTHRVSRSHSVRNQEKNANRNQTQSFALRQKKKGPPPPPPKRSSSAISSSNSNL
TDATNAQPHTHTTTGGMLDVPYHQQRRASDLGVSVEAGAVETSSVGSVRSIAAMLELSSI
GGGPKGKALQKNFLQVGKTRDAIGLDGEVVNRRRTISGPVTELVAAARREQPTPSAFPPP
TIQPETSPITVNSPTPPPSSPHPSSGGSGSSSENLPFAEEGSLTIRRQGRGEGEGQCVFC
VCLQGDGEGHHGDGGYTPEDISRVEGTATLKRRPRSSKSHPNGSDFTLQESSTVKRRPKS
RDKEPEGFAEMAAANGEPVATGQPNTTQPVPYQNGTATVKRRPVSDAGVTEQPQPQPQPQ
PQYQPQPQPQVTAPPRRDSLDQGAPMSNEGGPVRKPKPPVSPKPVVAQIKRQGGPPTPPH
PAANKRVPLPGPGTPGSPVEGKKIPPPVSPKPVPPPTAPKPAKLIHSMTSPPFNDSVKQH
SVVARQTSSPPSFPPSNIPSPPNAKSPSSQSPHTPQTPTTPQTPQTPATPSPTPPPVKPP
RSSIGGVSVDSGMTGGGVTAPAPATPDFGVDSLVHQKLEETSASLAAALQAVEDKILRQE
DSVAEQKTTVSILDDIGSMFDDLADQLDAMLE
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggaactgctgcaggcggtgaagaccgaggacctgctcaccgtgcag
aagctgctgcagaggccccggccagggaaagcaaagctcctcggctctgcaaagaaagtc
aacgtcaacttccaggacacagatgggttttctccgctgcatcatgcggccctcaatggg
aacctggagctcatcactttgctgctggagtcacaggctgctgtcgacatcagagaccag
aaaggtatgcggcctctgcactacgccgcctggcaggggaaggcggagcctatgaagatg
ctgctgaaatctggttcatctgtcaacggccaatcagacgaaggacagattcctctccac
ctggcagcgcagcacggtcactatgacgtgtcggagatgctgctgcagcaccagtccaac
ccatgtattgtggacaacgctgggaaaacccctctggacctggcctgtgagttcggcaga
gtcggggtggtccagctgttgctgtccagtaacatgtgtgctgctctgctggagcccaaa
aaaggagacaccaccgaccccaacgggacgtctcctctccacctagccgccaagaacgga
cacatagacatcatcagactgttgatccaggcgggtatcgacatcaacagacagaccaaa
gcgggcacagccctgcatgaagctgccctgtgtggaaagaccgaggcagtgagactcctg
ctggacagtggcatcaatgccacagtgagaaacacctacagtcagaccgcactggacatc
gtctaccagttcactgcaacgcaagccagccgagagatcaaacaactgctgaggggtagg
atggatggatcagtggattgggatgcctcagcggctctccaagttcgagctctgaaggat
tactgcaacaactacgacctgaccagcctgaacatcaaagcaggagacgtcataacggtt
ttggagcagcaccctgacggacgctggaaaggctgtatccatgacaaccgaacaggaaat
gaccgggtgggctacttcccttctaccatggtggaggtcatcagcaagcgcacaggtttg
gccagcacagtcatttgcactcaacagtttcaaaagataccgctggttcctccggcgacg
gttgcccctgccaacgcggtagtcaacggcaacgacaccacgttccatcagatccatatc
ctgcctccaccgcctcctcctccaccacattcccatcagccactgcttccacttttcact
tcctttggctataacaagtcgcccgtgacaaccccacagggagacacacccactgcccca
ggttgtcgcggctcagaggcaagtcctcacagctctcccaccccatccagtgggccccat
ggaggctccaacgaagagatctgggtactgcgcaagcccgtggcaggtggagaccgcagc
agtgtgggtagttcaggcagtgtgaccagtgtgaggtcatcaggcagcggtcagagtgcg
ggcagtgcagcacacatcctccatgcacaggctgagggggtgaagcttcttgctacagtc
ttgtcccagtctgccaaagccaaggagcatctcctggagcaatccaagtctgtggagcag
cctccagcaggctcagccggctcctctcggacatcgagccaatcgggctgtccactccat
gaagcgccgccttacgaagccacagcaaccaggaagggggagggcccaggagaggggaag
agctcagaggccgttgtccaatggctgagcgactttcagctgcaggtctacgctccaaac
ttcctgggcgctgggtatgacttgcccaccattagccgaatgaccccggaggatctcaca
gcgatcggaataactaaaccaggtcacagaaagaagatgacatcagagattaacaagctg
agtgtcacggagtggctgcctgagcagaaacctgccaatctaggagagtggctgtctgct
attggtctaagccagtaccaccaggtgttagtgcagaacggttacgagaatatcgagttc
atcaccgacatcacctgggaggacctgcaggaaataggcatcaccaaactgggccaccag
aagaagctgatgctggcggtgaagcggctggccgaaatgcagcgcagttcagaagggcgg
ggctccctccgaaagaagccgccgccaatcacgcagcagcaggaagtcatgtctatggac
agcccgcctccagacgagctcatgtctccaaagatgagcaccttccaggacagcgagctg
agcaccgagctgcagagtgccatgacacagccggggcaggaggtcagcaaagctcagagg
acacgcaacctcagcaaagaccatgacgaggtaataggaggaggaggtggaggtggtgga
ggaggaggtggcgctgtgccaccgaagaaggaggcgcggactatgaggcagcagagcagc
cagggaagcacgtcctctcacagaagcagcgcctcctcccaaggcaaacaccgtcactcc
cactcccactcccagcctgcgcctccctacacaccccctcatactcccaccaagactagg
acctcatcttcctcctccacctcctccgcccagagcacagcgtccccgcaggccaaacac
aagccgtcccctccgttcatccaaggggagagacctcagtctccgcgatcccatccccct
cagtctccaacacaccgtggagccccgtgtgcccagcaacagcagccccagcaacagcag
cagcctcaagtccagccacagcaccaggcgcaccctcagcaccacccacagacgcaggtc
atggaggttagggagaaccaacaaccacaggtcccactcctctgcctcccaccagaggcc
gagctggctgagggagaaggagcagagccttcagcgctccagaagaaacgtgcccacagc
ctcaacagatacgctgtctcagacggcgagtgtgacgagaaaccacgtggaggtggagga
ggtggagaaggagaagcagaggtagcgggatgtcagggccctgccgtcgccagaccggaa
ggaggtaaatacgccacggtgacccaccgcgtcagccgcagccactccgtccgcaaccag
gagaagaacgcaaaccgcaaccagacgcagtccttcgctctgcggcagaagaaaaaaggc
ccgccgcctccaccgcccaagcgctccagctctgccatctccagctccaactccaacctg
acggacgccaccaacgcacagccgcacacgcacaccaccacaggagggatgctggacgtg
ccttaccaccaacagcggcgggccagcgacctgggagtgtccgtggaggcaggcgctgtg
gagacgagcagtgtgggaagtgtgaggagcatcgccgccatgctggagttgtcatctata
gggggtggaccaaaaggcaaggcgctgcagaagaacttcctgcaggtggggaaaacacga
gatgccatcggtttggacggtgaagtagtgaaccgacgacggaccatcagcggccctgtc
accgagctggtggcagctgccagacgtgaacagccaactccctctgcgttcccccctcca
accattcaacctgagacctcccccatcaccgtaaattctccgacaccccctccgtcttcg
cctcaccccagctcgggaggcagcggcagttcatctgagaacctgccgtttgcagaggag
ggaagcctgaccatccgccggcagggtcgaggagaaggagaaggacagtgtgtattttgt
gtttgtctgcagggtgacggcgagggtcaccatggagacgggggttacacgccagaggac
atctccagggttgagggcacggcgaccttaaagcgacggccccgcagctccaagtcccac
cccaatggctccgacttcaccctccaagagtcgtccaccgtcaaacgacggcccaagagc
cgcgacaaggagcccgagggcttcgcggagatggccgcagctaacggagagcccgtggcg
actgggcaaccgaacaccacgcagccagtaccctaccagaacggcacggccaccgtgaaa
cgccgcccggtgtctgatgccggagtgacagagcagccgcaaccgcaacctcaacctcaa
ccccaatatcaacctcaacctcaaccacaagtgactgctcctcctcgcagggacagtttg
gaccaaggggctccaatgagcaatgagggaggtccagtcaggaaaccaaagcctccagtc
tccccgaagcctgttgtggcacagataaagagacagggaggcccgccaacacctccacac
cctgccgccaacaagagagtccccctgcctggccccgggacacctggaagcccagtggaa
ggaaagaagatccctccgcctgtctcgcccaaaccggtgcccccgcccacggcgcccaaa
ccagccaagctcatccactccatgaccagcccccccttcaacgactcggtcaagcaacac
tctgtggtggcccgacagaccagctcgccaccttccttccccccttccaacatccccagc
ccgccaaacgccaagagcccgtcttctcagagcccgcacaccccgcagacccccaccaca
ccacaaacaccccagactcccgccactcccagtccgaccccgccaccggtcaagccacca
cggtcctccattgggggtgtgtcggtagatagcgggatgacgggaggcggagtcacagca
ccggcccctgcgacgccggactttggcgtagattctttggtgcatcagaagctggaggag
acgagcgcgtcgctggccgcggctctgcaggctgtagaggacaagatactgcggcaggag
gactctgtggccgagcagaagaccaccgtcagcatcctcgacgatatcggcagcatgttc
gatgacctggccgaccagctggacgccatgttggagtaa
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