Larimichthys crocea (large yellow croaker): 104929008
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Entry
104929008 CDS
T04659
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lco03009
]
104929008 (nop2)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
104929008 (nop2)
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104929008 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
PCMT
Motif
Other DBs
NCBI-GeneID:
104929008
NCBI-ProteinID:
XP_019120874
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All DBs
Position
XIII:complement(14470857..14476432)
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AA seq
784 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKARKQQGAETELAKFINDEDTETKRLSSRGRKRAAKRVQNVKK
PKDAAQEQPKKGFSDENSKWLKPAKRKRKINEPESEDDSDEHWEEEEDEEEEEQQQQQQQ
QQQQQKKKGGKDQGKKGAKLEVKEVEEEEEEDEEEEEDEDDDDDDDDDEMVDDYGAAEEE
EEAAAEEEESDGEELLPIERAAKKEKKLKETMGLESDDDDDDEEDDDDDDEDDDEGKKSD
AEMDEEDTVQTNIDEMDQFRLPGAEEREKEGALPLDLKTIHQRIKDNIDVLCNFSTKREA
GKERAEYISLLKKDLCTYYSYNNFLIEKLMDIFPLSELVDFLEANEIQRPVTIRTNTLKT
RRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPVGATPEYLSGQYMLQGASSFLPVMA
LSPQEGELVLDMSSAPGGKTTYIAQLMRNTGVIVANDANAERLKSVVGNIHRLGVTNTVV
CNYDGRQFPKVMGGFDRVLLDAPCSGTGVIAKDPAVKTSKDDADIHRSAHLQKELILSAI
DSVNAESPTGGYLIYCTCSIMVEENEWVVDYALKKRNVKLVPAGLDFGKEGFTRFKERRF
HPSLRLTRRFYPHSHNMDGFFVAKLKKFSNVIPTTPAGKEEEENTDAADATVVPDSVEEK
LSKSDKTKKTVPGKADSLKEKTQANGTAAKKTANIKSKGKKDSPAGPKKAKIAKMDGETV
KGAKVKKPAVKTADETKASKADSKEGSRFEKKQGKKTKSPMKAKNRIGKNKFKKLKRMLE
KQVE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagttggatcccaccaacaaggtgaagagggggccagggaaaaaggccagg
aagcagcaaggagcagagactgagttggccaagtttataaatgatgaggacacagaaaca
aaacgcctgtcaagtagaggcaggaaaagagcggcaaaaagagtccagaatgtgaaaaaa
cctaaagatgctgctcaggaacagcccaagaaaggattctctgatgagaacagtaaatgg
ttgaaaccagcaaagaggaagcgtaaaatcaatgaacctgaaagtgaggatgacagtgat
gagcattgggaggaagaggaagatgaggaggaggaggaacagcaacaacaacaacaacag
cagcagcagcagcagaagaagaagggaggaaaagaccaaggaaagaagggtgccaaatta
gaagtgaaagaagtagaggaggaggaggaggaggatgaagaagaggaggaggacgaagat
gacgatgacgacgatgatgatgatgaaatggttgacgactacggtgcagcagaagaagaa
gaagaagcagcagcagaagaagaagaaagtgatggagaggaacttcttcccatcgaacgt
gcagccaagaaagagaaaaagctgaaggaaaccatgggtttagagagtgatgatgatgac
gatgatgaggaagacgacgacgatgatgatgaagatgatgatgaggggaaaaaatcagat
gctgaaatggatgaggaagacaccgtacaaaccaacatagatgaaatggatcaatttagg
ctaccaggggcagaggaaagagagaaagaaggtgccctgcctctcgacctcaagacaatc
catcaaaggataaaggacaacattgacgtcctctgtaatttctcaacgaaaagggaggca
gggaaagagagagcagagtacatttctcttctgaagaaggatctctgcacctactacagc
tacaacaacttcctcattgagaaattaatggacatcttccctctttcagagctggttgat
ttccttgaggccaatgaaattcagagacctgtcactatacggaccaacacactgaaaact
aggaggcgggacctggcacaggcgttgatcaacagaggagtgaaccttgacccactgggg
aaatggtctaaagttggtttggttatttatgactcctccgtacctgtaggtgcaacacca
gagtatctgtctggtcagtacatgctgcaaggagcctctagtttcctgccagtcatggca
ctctctccacaggaaggagagttggtgttggacatgagctcagctccaggaggcaagact
acttatattgctcagctgatgagaaacacaggggtgatcgtggctaatgacgccaacgct
gaaagactgaagagtgtggttggcaacatccaccgtctgggcgtcaccaacactgtcgtc
tgcaactacgatggaaggcagttcccaaaggtaatgggtggatttgatagagtgctgctt
gatgctccgtgctcaggcacaggagtcatcgctaaagatccagctgtgaagaccagtaag
gacgatgcagacatccatcgctctgctcacttgcagaaagaactgattctttcggccatc
gactctgtcaacgctgagtcccctacgggaggatatctgatctactgcacatgttcaata
atggtggaggagaatgaatgggtggtggactatgctttaaagaaaaggaatgtcaagttg
gttcccgcaggacttgactttggaaaggaaggcttcaccaggtttaaagaacgtagattc
catccttctctgcgattgactcggaggttttaccctcattcccacaacatggatgggttt
tttgtggccaagctgaagaaattctccaatgtgattccaacgacaccagcaggaaaagaa
gaagaagaaaacacagatgctgcagatgccacagttgttccagactctgttgaagagaaa
ctatccaaaagtgacaagacaaagaagactgttcccggcaaagcagacagcttaaaggag
aagacccaagccaacggaacagcagccaagaaaacggcaaacatcaagtcaaaaggcaaa
aaggactcaccagctggaccaaaaaaggcaaagattgccaagatggatggagagactgtg
aaaggggcaaaggtcaagaagcctgcagtgaagacagctgatgaaactaaagcatcaaag
gctgacagtaaggaagggagcaggtttgagaaaaaacagggcaaaaagacaaaatcaccc
atgaaggcaaagaacagaatcgggaagaataaattcaaaaagttgaagcgtatgctggaa
aagcaagtggagtga
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