Larimichthys crocea (large yellow croaker): 104929009
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Entry
104929009 CDS
T04659
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104929009 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lco03009
]
104929009 (emg1)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
104929009 (emg1)
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
90S particles
Other 90S particles
104929009 (emg1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
104929009
NCBI-ProteinID:
XP_027142285
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All DBs
Position
XIII:14477167..14479732
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AA seq
237 aa
AA seq
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MAAPNEKKRGLEHLDEYEPKPAKHLRSLHDRMAERRLVVILEGASLETVKVGKTFELLNC
DQHKNMIVKSGRNPGNIRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFSRFCGLMVQLLHKLSVRAADGPQKLLRMIKNPVSDHLPPGCPRISTSFSSGEAVCP
RTLVPEGPAAVVVGAFAHGAVNVDYTEKTVSISNYPLSAALTCAKMCSAFEEVWGVL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctaacgagaagaagcgtggtcttgaacatttagacgaatatgaaccaaaa
cctgccaaacacctccgcagcttacacgaccgcatggcggagaggaggctggttgttatt
ctggagggagcatcgttagagacagtgaaggttggaaaaacctttgagctgttaaactgt
gaccaacacaaaaacatgatcgtgaaaagtggaagaaaccccggaaatataagaccagac
atcactcatcagtgcctgctcatgttgatggacagtccactgaacagggcaggtctgttg
caggtttatatccacacagagaaaaacgccttaatagagatcaacccacagacccgcatc
ccaagaaccttcagtcgcttctgtggcctcatggttcagctgctgcacaaattgagtgtc
agggccgctgatggtcctcaaaagcttctgaggatgattaaaaacccagtgtctgaccac
ttacctcctggctgccctcgcatttccacctccttctcttctggagaggctgtctgcccc
cggacattggtgccagagggaccagctgcagtggtggttggagcgttcgcacacggagcg
gtgaatgtggactacacagagaagaccgtgtccatcagtaactaccccctctctgcggca
ctgacctgtgccaagatgtgctctgccttcgaggaagtgtggggtgtcctgtga
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