Larimichthys crocea (large yellow croaker): 104929046
Help
Entry
104929046 CDS
T04659
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04020
Calcium signaling pathway
lco04080
Neuroactive ligand-receptor interaction
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104929046
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104929046
04082 Neuroactive ligand signaling
104929046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104929046
Ion channels [BR:
lco04040
]
Ligand-gated channels
Glutamate (ionotropic)
104929046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
104929046
NCBI-ProteinID:
XP_019110442
LinkDB
All DBs
Position
XIII:complement(8817759..8951170)
Genome browser
AA seq
1881 aa
AA seq
DB search
MASFSSTSFSSVLVGEIVMTPSGQANVIYLAVNESSPGSLLLQLCELLATTPLQGLVFEE
ERPPPPNRAPLAPMLEFVSAQTGVPVVAVGGGASLGREPQESGSIYLQFTCSTSLQLEVI
FEVLEEYDWTSFSVVTTRHHGYEDFLAMVEGMTDGSFIGWEKKSVVILNVTDDPGGARTK
RLLKDNEAQVRLLYCSLEEAELIFRAAWAAGQAGPSHMWFAVGPALSGLGLEGLPKALFA
IRPQGWRDEPRRRIAKGVSVLTHGAMALWRDKGATSRSQYAGNCHSDGNQTHRVADRIRY
FTNISIGGRDYSFNNDGYLSKPLLDVISYTNGRGWEEVGWWENGHLRLRYHPWSRYGSFL
KPLDDAQHLRVVTLEERPFVIVEPADPGTSSCIRDSVPCRMPVNTSLVVDGTGPMKHCCK
GFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGEWNGMVGEVVSNRADMAIGSLTINEE
RSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFE
FFSPVGYNRSLQSAKKSGGSKFTIGKSVWLLWALVFNNSVPVENPRGTTSKIMVLVWAFF
AVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEENIRSN
YPNMHQYMIRNNQKGVEEAIDNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFA
TTGYGIALHKNSRWKRPLDLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNM
AGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCVKRSGGMDFLLALSRGMYSCCQFEDETAP
GGRKSSLPQYHTMTAMPTAPQQHLVTATINNTTAIAMVQQQQQQQKHHQQQQQGQTYTTM
LPGSPPTTGHSAMALGPSNSPLLEGPMPCSTFLPRHDRRLAVVDRWNRPKPEKVMSAGSA
GGVGIGGIAGGISELQAQQQFQQNLGQHWTLPGGVSGGAGAGGDTGLDEYKRYYGPIDPE
GLGANSDQQAGGPQQTPKANPRGPKASGMPRLPPKGPQQGPGHLIPKPPPPLPSSPRRPP
FWRRGSLVQARRKGSGGPLYENILPLGRRGGGRYGASDGGGRRGRRPPPPPPLPVPLSSP
THTPTTPSSPCRFHSSCSSASSSSSSSTTSSSSSSSSVSLSRSNSPSSCSSDSSYNSSLS
FRYRAGDRDFTVDDDYDSDLLTEESSLLLGSRRKIRSRRMSSRSLPCSPPPPPIPPRKPR
PQRDYGRERTGSQLAQLQEWWASWGDRERGRGGTTSRGDGAIGREEKRHNKERERERKRR
KKGRKKKKREERERERERKRRKTKKKRKKEDKTRKRERKRSEQEGGDDKREELKSGTPDY
PSYPPLRRESFRKKSESSIRSYGWNIPGEEERKEREDKERDDGEDIRGKERHHRRRNSKL
YQSSSCKPSSSVKFWGGGNPSSDTIPSAFLPLLPAPSKRRKSKSSDRDAAGIEGERRPLL
GRDGRGEVHSKEGLSFHEWESEVEHEEEDSELERRKAERGKRRRGGRTMSDEERERDKVV
GIYSDDDGSSGEFGKFERYWEDHEGRAVGGIGGGGWFFSTYPSREKAGSINSRDDLFLER
GERWGTAEGGWGGARGDGGDRGWGSGSHWPQPPLTPPPPRRYWSVDKLHIQDEKKSKRKS
KDKGRGHAACSSCQSPRHHPHSHSSKWARITSRSQEELYQHCQSFGGPLKPKHDSSSSSK
PDRSQNPSKSGSQSNLSIQQRTQRTDRDRDRGRQSSPPPTLIPNLPPPLPALPAPPSSSH
PIHVPPPTSSSSVSSPSVVSSTPGAPQPSSMASASAKLQYQRLRSVPQPQRFPQSPHLPL
KAKSLCSRRGSAHFSSVESEV
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgttttcctccacctcgttttcctctgtgctcgtgggggagatagtgatgact
ccatcgggtcaggccaacgtcatctacctggctgtgaatgaaagcagcccgggtagcctg
ctgctgcagctgtgtgagctgctggccaccacaccactgcagggtttggtgtttgaggag
gagaggccgccgccgccaaaccgcgcccctctggcccccatgttggagtttgtctccgcg
cagacgggggttcccgtggtcgccgttggcggaggggccagtctaggacgagagccacag
gaaagtggctccatctacctccagttcacttgctccacttcactccagctcgaggtcatc
tttgaggtgctcgaagagtacgactggacctccttctctgtggtgaccacccgtcaccac
ggctacgaggacttcctggctatggtggagggaatgacggatggttcattcattggctgg
gaaaagaagagcgtggtgattcttaacgtgacagatgaccccggtggggctcgaaccaaa
cggctactcaaagacaatgaagcccaggtccgtctgctctattgttccctggaggaggct
gaactgattttccgggcagcctgggcggcgggacaggccgggcccagtcacatgtggttc
gccgtgggacccgccctgtctggattgggcctggaggggttgcccaaggccctgttcgcc
atccggccgcagggctggagggacgagccacgaaggcgcatcgccaaaggcgtctctgtg
ctcacccacggggcgatggctctgtggagggacaagggggccaccagccgctcgcagtac
gccggcaactgccacagcgacggcaaccagactcacagagtggctgacagaatcaggtac
ttcaccaacatatccatcggtgggcgggactattccttcaacaatgacggctacctgtcc
aaaccgctgcttgatgtgatctcctacaccaatgggagaggctgggaggaggttggctgg
tgggagaatggccacctgcgtctgcggtaccatccctggtctcgttatggctccttcctg
aagcctctggatgatgcccagcatctccgcgtagttactttggaggagaggccctttgtc
attgtggaaccggctgacccgggcaccagctcatgcatccgggactctgtaccctgtcga
atgcccgtcaacaccagtttggtggtggatggcaccgggccaatgaagcactgttgcaaa
gggttctgcatcgacgtcctcaagcgactggcaaaaattgttggtttcacctatgacctt
tacttggtgaccaatgggaggcacgggaagaacattgatggggagtggaacggcatggtc
ggagaggtggtgtccaacagggccgacatggccatcggttctctcaccattaacgaagag
cggtcggaggtcgtagagttctccgttccattcgtggagaccggcatcagcgtcatggtt
tctcgcagcaacggcaccgtatcgccttctgctttccttgagccctacagcccagcggtg
tgggtgatgatgtttgtgatgtgcctgtcggtggtggctgtcaccgtcttcatctttgag
ttcttcagccccgtgggatacaaccgcagcctgcagagcgccaagaagtcaggtggatct
aagttcaccatagggaagtcagtctggctattgtgggcgctcgtcttcaacaactctgtg
cctgtggagaatcccagaggaaccaccagcaagatcatggttctggtgtgggccttcttc
gctgtcatcttcctggcctcctacactgccaacctggctgccttcatgatccaggaggag
tacatcgacacggtgtcagggctgtcggataagaagttccagcacccgacggagcagtac
ccgccgctgcgtttcggcaccgtgccaaatgggagcacagaggagaacatccgctccaac
taccccaacatgcaccagtacatgattcgcaacaatcagaagggcgtggaggaagccatt
gacaacctcaagactgggaaactagatgccttcatttatgacgccgcggtgttgaactat
atggccagaaaggacgaaggctgcaaggtgatgaccatcggctccggtaaggtgtttgcc
actacgggctacggcatcgccctgcacaagaactcccgctggaaacggccgctagacctc
gcccttctgcagctcgtcggagacgatgagattgatatgttggagcgtctctggctgtcg
ggtatctgccacaatgataagatcgaggtgatgagcagtaagctggacatagacaacatg
gccggggtcttctacatgctcctggtggccatgggcctcagcctcctggtatttgcctgg
gagcatctggtgtactggaaactacggcactgtgtgaagcgatccggcggcatggacttc
ctcctggcactcagcagggggatgtacagttgctgccagtttgaggatgagacagcaccg
ggaggaagaaagagctctttgccccagtaccacacgatgaccgccatgcctacggcaccc
caacaacaccttgtgacagctacgataaataacacgactgccattgccatggtgcagcag
cagcaacagcagcagaagcaccaccaacagcagcaacaggggcagacctacaccacaatg
ctacctggttccccgccaactacgggacactcagcaatggctctgggaccctcgaacagc
cccttgctcgaaggccccatgccctgctccaccttcttgccacggcatgaccgcagactt
gctgtggttgatcgctggaacaggccaaagcctgagaaagtcatgagcgcgggcagtgct
ggaggagtgggtattggagggatagctggagggatcagcgaactccaggcacagcagcag
tttcagcagaatcttggacagcactggaccctgccaggaggtgtttcaggtggagcaggg
gcaggaggtgacacggggctagatgaatataagcgctactatggtcctatagatccagag
gggctaggagctaactcggaccaacaagcagggggcccgcagcagactcccaaagctaat
cctcgaggccctaaagcctcaggcatgccacgtctgcctcctaaaggcccccaacaaggc
ccagggcacttaatccccaagccacctccacctctcccatcctctccacggaggcctcct
ttctggcgacgagggagtctagttcaggcaaggagaaaaggctcaggaggtcccctgtat
gagaatatactccctctggggaggcggggaggtgggaggtatggagcaagtgatggaggt
ggaaggagaggacgacgccctcctccacctcctcctctgcctgttcccctttcctcccca
acacacacccctaccactccgtcctccccatgccgtttccactcctcctgctccagtgcc
tcgtcctcttcctcttcttctacaacatcatcatcctcgtcttcatcctctgtttcgctc
tccaggtcaaattccccctcctcttgctccagtgacagctcctacaattcctcgctgagt
ttccgatatcgagcgggcgaccgggactttactgtggatgatgattatgattcagatctg
ctcacagaggagtccagcctcctcctcgggtcacggaggaagattcgctcacgtcgcatg
tcatcgcgctcactgccgtgcagcccgccgcctccgccgatcccgcccagaaagccacga
cctcagagagattacggcagagagagaacgggcagccagctcgcccaattacaggagtgg
tgggcatcgtggggggacagagagcgaggcaggggaggaacaacgagtcgaggagacgga
gcaattggtagagaggagaagaggcacaacaaggagagggagcgtgagaggaagaggagg
aagaagggccgaaagaagaagaagagggaggagagggagagagaaagggagaggaagcgc
cgtaaaacaaagaagaagaggaagaaagaggataagacaaggaagagagagcggaagagg
tccgagcaagagggaggagatgataaaagggaggaactcaagtcagggacaccagactac
ccatcgtacccacccctgagacgagagtcttttcggaaaaagagtgaaagctccatcaga
agctatggatggaacatcccgggtgaagaagagaggaaggaaagagaagacaaagagagg
gatgacggggaggacatcagagggaaagaaagacaccacaggcgaaggaacagcaagctc
tatcaaagctccagctgtaagccttcttcatccgtcaagttctggggtgggggcaaccca
tcctctgacactattccatctgcctttctgcccttgttgcctgccccctctaaaaggaga
aagagtaaaagttcagacagggatgccgcaggaatagaaggagagaggaggccattgctg
ggacgggacggacgaggtgaggtgcactccaaggaggggttgtccttccacgagtgggag
tctgaagtagagcatgaggaagaagattctgagcttgaacggaggaaagcggagcgtgga
aagagacgccgaggaggaaggacaatgtccgatgaagagcgggaacgtgataaggtagtt
gggatatattctgatgacgacggttcttcgggagagtttggaaagtttgagaggtactgg
gaggatcatgaaggcagggcggtcggaggaatcggagggggaggttggttttttagcacc
tacccttccagggaaaaagccggcagcatcaacagtagagatgatctgttcctggagcga
ggagagaggtgggggacagcagaaggtggatggggaggagcaagaggagatggaggagat
agaggatggggatcaggttcacactggccccagcctcctctcacgccaccacctcctcga
cgatactggtcagtggacaagctccacatacaggatgaaaagaagagtaaacgcaagtca
aaggacaagggaagagggcatgcagcttgttcgtcctgtcagtcccccagacaccatcca
cactcccattcctcaaaatgggcgcgcataacctcacgaagccaggaagagctgtaccaa
cactgccagagttttggtggtcccctcaagcccaaacatgactcctcgtcatcctcaaag
cctgatcgctcacaaaacccatccaaatctggaagccagtcaaacctcagtatccagcag
cggacacagagaacagatagggatagagatcgaggacgtcaatcatccccgcctccgacc
ctcataccgaatttaccacccccgctccccgcccttccagctcctccatcctcatcacac
cctatccacgtccctccccctacctcctcctcctctgtatcctctccctctgtggtctca
tcaaccccgggggcgccccagccctcctccatggcttcggcaagtgctaaactacagtac
cagagattgcgttctgtacctcagccccagaggtttcctcagtctcctcacttacccctc
aaagccaagagcctttgctcacgaaggggctcagcccatttctccagtgtggagagtgag
gtttga
DBGET
integrated database retrieval system
