KEGG   Larimichthys crocea (large yellow croaker): 104929056
Entry
104929056         CDS       T04659                                 
Symbol
smug1
Name
(RefSeq) single-strand selective monofunctional uracil DNA glycosylase isoform X2
  KO
K10800  single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104929056 (smug1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104929056 (smug1)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     104929056 (smug1)
 Prokaryotic type
     104929056 (smug1)
SSDB
Motif
Pfam: UDG DUF2652
Other DBs
NCBI-GeneID: 104929056
NCBI-ProteinID: XP_010741789
LinkDB
Position
VI:complement(18003099..18005999)
AA seq 280 aa
MSGDGETAGGGAGLQPLCDPPQQSFNSAPELSVSPSSRFLQVELELNTHLRRLTFSEPVR
YIYNPLEYAWDTHRCYVEKYCQGGQRVLFLGMNPGPFGMAQTGVPFGEVKSVVDWLKITG
EVGHPSDEHPKRRITGLACTQSEVSGARFWGFFRKLCGEPSLFFQHCFVHNLCPLIFMSA
SGKNLTPPELLLREREALLALCDIALCQAVEALGVSMVIGVGRVAEQRARRALSAAGVEG
VRVEGIMHPSPRNPLANKGWEEVAKAKLSELGVMSMLKKE
NT seq 843 nt   +upstreamnt  +downstreamnt
atgtcaggggacggtgaaacagccggtggaggtgccgggctgcagcctttgtgtgacccg
cctcagcagagctttaactcggccccggagctcagcgtgagcccttcctccagattcctg
caggtcgagctggagttgaacacccacctgcggcggctcaccttcagcgagcccgtccgg
tacatctacaacccgctggagtacgcctgggacacgcaccgctgctacgtggagaagtac
tgccagggcggacagcgcgtcctgtttctgggcatgaatcctggacccttcggcatggcg
cagaccggggtccccttcggggaagtgaagtctgtcgttgattggctgaagatcacaggg
gaggtcggtcatccttctgacgagcatccaaagcgacggatcacaggacttgcctgcact
cagagtgaagtgagcggtgcacgtttctggggcttcttcaggaagttgtgtggtgagccg
tcactgttcttccagcactgcttcgtgcacaatctgtgcccgctcattttcatgagtgcc
agtggaaagaatttaaccccccctgagctgcttttacgtgaacgggaggccctcctggcc
ctctgtgacattgcactgtgccaagcggtggaggcgctgggtgtctccatggtgattggg
gttgggagggtagcagagcagcgagcgcggcgtgccctgtctgctgcaggcgtcgagggt
gtgcgagtcgagggcatcatgcatccgtcacccaggaacccgctagccaataagggctgg
gaggaagtagccaaagccaaactttcagaacttggtgtcatgtcaatgttaaaaaaagag
tga

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