Larimichthys crocea (large yellow croaker): 104929133
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Entry
104929133 CDS
T04659
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04115
p53 signaling pathway
lco04120
Ubiquitin mediated proteolysis
lco04137
Mitophagy - animal
lco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104929133 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104929133 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104929133 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
104929133 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104929133 (siah1)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104929133 (siah1)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104929133 (siah1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
104929133
NCBI-ProteinID:
XP_010741885
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All DBs
Position
XXI:9491215..9517936
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AA seq
286 aa
AA seq
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MDEEMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatgagtcgccagactgccaccgcgctgcccacaggaacctccaagtgt
cccccatcccagcgcgtgcccaccctgtcaggcaccaccgcctccaacagtgacctggcc
agcctgttcgagtgccctgtctgcttcgactatgtcctaccccccatcctgcagtgccag
tccggacacctggtatgctccaactgccggcccaagctcacctgctgccccacctgccga
ggccccctgggctccatcaggaacctggccatggagaaggtggccaactcagtcctcttc
ccctgcaagtacgcctcatcgggctgcgaagtaaccctgcctcacaccgacaagacggag
cacgaagagctgtgcgagttccggccgtactcctgcccctgccccggcgcctcctgcaag
tggcagggctccctggacgctgtcatgcctcacctgatgcaccagcacaagtccatcacc
acgctgcagggggaggacattgtgttcctggccacggacatcaacctcccgggcgcggtg
gactgggtaatgatgcagtcgtgcttcggcttccacttcatgctggttctggagaagcag
gagaagtacgacggccaccagcagttcttcgccatcgtgcagctcatcgggacgcgcaag
caggcggagaacttcgcctaccggctggagctcaacggccaccggcgccgcctgacctgg
gaggccacgccgcgctccatccacgagggcatcgccacggccatcatgaacagcgactgc
ctggtgttcgacacgtccatcgcacagctgttcgccgagaacggcaacctgggcatcaac
gtcaccatctccatgtgctaa
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