Larimichthys crocea (large yellow croaker): 104929141
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Entry
104929141 CDS
T04659
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104929141 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104929141 (exosc6)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104929141 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104929141
NCBI-ProteinID:
XP_010741891
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Position
XXI:10343822..10347052
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AA seq
275 aa
AA seq
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MPTDTKRVRGPELSQNPGLFACRPAGVVHATHGPRADGRQRDQVDVRPVFVRCGLVSQAK
GSAYIEAGNTKLMCCVYGPRETERKDETDMKCGRLTTDMRFAPFSCPERGSWIQGSQDKD
FSLMLHESLQPALCLHKYPRSQIEVNVMVLENSGSVLAHAVTCASLALADAGIEMYDLVL
GCSIRQDGASYVVDPSYAEENSCSSVSGENQGGLTVAFLPSLNQISGLQSDGEMAEETLT
AGVRTCIEGCYKLYPVIQQALAKAVRRAAPPPSES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgacaccaagcgtgtgcgcggcccggagctgtctcaaaacccgggtctgttt
gcgtgcagaccggcgggtgttgtccacgccacgcacggccccagagcggacggtcggcag
cgggatcaagtggacgtgcggcccgtgtttgtccgctgcgggctggtgagccaggcgaaa
ggctccgcgtacatcgaggctggaaacaccaagctcatgtgctgcgtctacggccccaga
gagacggagaggaaagacgagaccgatatgaagtgtggaaggttgactaccgacatgcgt
tttgctccattctcctgcccggagcgaggctcctggattcagggaagtcaggacaaagac
ttctccctgatgctgcatgagagtctgcagccggccctgtgcctccacaaatatccccgc
tctcagatcgaggtcaacgtgatggttcttgagaacagcggttcagttctggcccacgcc
gtcacatgtgcatctctggctcttgcggacgccgggatcgaaatgtacgatctggtgctg
ggttgttcaatccgtcaggatggcgcctcttatgtagttgacccgtcttacgcggaggaa
aacagctgcagctcagtcagcggcgagaaccagggtggactcactgttgctttcctcccc
agcttgaaccagatttcagggctgcagtcggatggggaaatggctgaagagactctgaca
gctggggttcggacctgcattgagggatgctataaactgtacccggtcatccaacaagcc
ctggctaaagctgtgcgcagggctgctcctccgccatcggagagctga
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