Larimichthys crocea (large yellow croaker): 104929205
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Entry
104929205 CDS
T04659
Name
(RefSeq) thyroid hormone receptor alpha-B isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04080
Neuroactive ligand-receptor interaction
lco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104929205
04081 Hormone signaling
104929205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104929205
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lco03310
]
104929205
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104929205
Nuclear receptors [BR:
lco03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
104929205
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104929205
NCBI-ProteinID:
XP_019133279
UniProt:
A0A6G0HXY8
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Position
XVI:complement(22574364..22763264)
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AA seq
409 aa
AA seq
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MEHVPKEQDPNPSEGEEKRWLNGPKRKRKNSQCSVKSMTGYIPSYLEKDEPCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRFKKCIAVGMA
MDLVLDDSKRVAKRRLIEENRERRKKEEMVKTLQNRPEPTGDEWELIHLVTEAHRHTNAQ
GAQWKQKRKFLPDKIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSE
LPCEDQIILLKGCCMEIMSLRAAMRYDPESETLTLSGEMAVKCEQLKNGGLGVVSDAIFD
LGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTSMDKIEKCQETYLLALEHYINYRKHNIP
HFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgttcccaaggagcaggaccctaacccatcagagggagaagagaaacggtgg
ctcaatggcccgaaaaggaagaggaagaacagccaatgttcggtgaagagtatgactggg
tacatccccagctacctcgaaaaggatgagccatgtgtggtgtgtggtgacaaggccaca
ggttaccactaccgctgcattacctgcgagggctgcaagggtttcttccgtaggaccatt
caaaagaacctccacccctcctactcctgtaagtacgatggctgctgcatcatcgacaag
attacccgcaaccagtgtcagctctgccgcttcaagaagtgcatcgcagtgggcatggcc
atggacttggtgctggatgactcaaagcgggtggctaaacggcgcctgatcgaggagaac
agggagcgacgcaagaaggaggaaatggtgaaaactctccagaaccgtccagagccaacg
ggggacgagtgggagctgatccacctggtgacggaggcccaccgacacaccaacgctcag
ggcgcacagtggaaacagaagcgcaaattcctgccagacaaaatcggccagtccccggtc
gctcccacgtcggacggagacaaggtggacctggaggccttcagcgagttcaccaagatc
atcactcctgccatcacccgtgtcgtcgactttgccaaaaaactgcccatgttctccgag
ctaccttgtgaagaccagatcatcctgttgaagggctgctgcatggagatcatgtccctg
cgagccgccatgcgctacgacccggagagcgagactctgacgctgagcggggagatggcc
gtgaagtgcgagcagctgaagaacggcgggctcggcgtggtgtcggacgccatcttcgat
ctgggcaagagcctggcgcagttcaacctggacgacacagaggtggcgctgctgcaggcc
gtgctgctgatgagctcagaccgttctggcctgacctccatggacaagatcgagaagtgc
caggagacctacctgctggcgttagagcactacatcaactaccgcaagcacaacattccc
cacttctggccgaagctcctgatgaaggtgacggacctgcggatgatcggggcgtgccac
gccagccgcttccttcacatgaaggtggagtgccccaacgaactcttcccgccactcttc
ctggaggtcttcgaggaccaggaagtgtga
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