Larimichthys crocea (large yellow croaker): 104929237
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Entry
104929237 CDS
T04659
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104929237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104929237
Membrane trafficking [BR:
lco04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
104929237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
104929237
NCBI-ProteinID:
XP_019108867
LinkDB
All DBs
Position
XV:5409014..5435104
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AA seq
1869 aa
AA seq
DB search
MQQQQQQQRPPPPLTPPTPQQQQQNSQSKAENSKTKSMFLSRALEKILSDKEVKRSQHSQ
LRKACQVALDEIKAELEKQKDGTVVPPRANYIEADKYVLPFELACQSKSPRIVSTSLDCL
QKLIAYGHITGNAPDSRTPGKRLIDRLVETICNCFQGPQTDEGVQLQIIKALLTTVTSPH
IEIHEGTVLLTVRTCYNIYLASRNLINQTTAKATLTQMLNVIFTRMENQAALEAQEQEKD
RLRLPQQNPSPVPGNRRSGSPRSDRTSTPEPQSSPSPAASSPDLTTTNTTSTMHPQQTAD
QDQDQAADTPSINGEPESGSAPINGGTEPVTPTRDSVFEDEGVGTHPTAAQPAEEGDKPE
SSPNSAESETTEGEEGERQPTQMHSETAFLPGGEYPAHPVTEQTEVPPPRVRTEGQQMNG
IIEDRSSVSSTDMLDAEALQGPHSAARFSHILQKDAFLVFRSLCKLSMKPLADGPPDPKS
HELRSKIVSLQLLLSVLQGAGPVFRTHEMFVNAIKQYLCVALSKNGVSSVPEVFELSLAI
FLTLLSHFKVHLKMQIEVFFREIFLTILETSTSSFEHKWMVIQTLTRICADAQCVVDIYV
NYDCDLNAANIFERLVNDLSKIAQGRSGQELGMTPLQELSLRKKGLECLVSILKCMVEWS
KDMYVNPNLQANLGQEHPSDSDGGELKLPEQLAGRRDSISSLDSTVSSSVTASQADHPEQ
YEVIKQQKDIIEHGIELFNKKPKRGIQYLQDQGMLGSTVEDISQFLHQEDRLDTTQVGEY
LGENIKFNKEVMYCYVDQLDFCGRDFVSALRAFLEGFRLPGEAQKIDRLMEKFAARYLEC
NQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLS
SIYDEIAGKKIAMKESKEFSITPKSTKQSVASEKQRRLLYNMEMEQMAKTAKALMEAVSH
AQAPFFSATHLEHVRPMFKLAWTPLLAAFSVGLQDCDDPEVASLCLEGIRCAIRIACIFS
MQLERDAYVQALARFTLLTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILRCI
SQLELAQLIGTGVKTRYISGVVRDKEAGIKGLPSGTEEFMPLGLGNLVGSQDKRQMAHIQ
ESVGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASAHQPRMFSLQKIV
EISYYNMNRIRLQWSRIWQVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANF
RFQKDFLRPFEHIMKKNRSPTIRDMVIRCVAQMVNSQAANIRSGWKNIFSVFHQAASDHD
ETIVELAFQTTGHIVMKTFQEHFAAAIDSFQDAVKCLSEFVCNAAFPDTSMEAIRLIRHC
AKYVSERPQTLREYTSDDMNVAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFE
IMKSYGHTFEKHWWHDLFRIVFRIFDNMKLPEQQTEKTEWMTTTCNHALYAICDVFTQFY
EPLSEILLADIFTQLQWCVRQDNEQLARSGTNCLENLVILNGEKFSPDVWKITCSCMLEI
FQNTSPHALLTWRPAGQDEETTDGKHFDADFDSQSQSSYDRALSERGHSQMSSDDTWKGK
SNARLSDQKLFAGLLIKCVVQLELIQTIDNIVFFPATSKKEDAENMAAAQRDALEESESE
GGEAGLDQGMYRHMTSAHLFKLLDCLLESHTFAKDFNSNNEQRTALWRAGFKGKSKPNLL
KQETSSLACSLRILFRMYSDRQLQDSWPDIQTRLLLVCSEALAYFISLTSESHREAWNSL
LMLLLTRTLRLPDDKFKPHASCYYPHLCEMMQFDLIPELRAVLRRFFLRIGSAFHIAAPE
GVYARTPSS
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagcaacaacaacagcggccaccaccaccactaacaccaccaacaccacag
cagcagcagcaaaactcacagtcgaaggcggagaacagtaaaaccaagagcatgtttctg
tccagggcgctggagaaaatcctctcggacaaggaggtgaagaggagccagcacagccag
ctgcgcaaagcctgtcaggtggcgctcgatgaaatcaaggcagagcttgaaaaacaaaag
gatggcactgtggtcccacccagagccaactacatcgaggctgacaaatatgtgctgccc
tttgagttggcctgtcagtcgaagtccccccggatagttagcacctctttggactgtctg
cagaagctgatcgcgtacggccacatcacaggcaatgccccggacagcaggaccccgggc
aagaggctgatcgaccggctggtggaaaccatctgcaactgcttccagggcccgcagacc
gacgagggagtgcagctacagatcatcaaggccctgctgacgaccgtgacctccccgcac
atagagatccacgagggcacggttctcctcacagtcaggacctgctataacatctacctg
gccagccgcaacctcatcaaccagaccacggcgaaggccacgctcacgcagatgctcaac
gttatcttcacacgcatggaaaaccaggctgctctggaggctcaggagcaagagaaggac
cggctacgtctgccccagcagaacccatccccagtcccaggtaatcgcaggtccggctct
ccgcggtccgaccggacgtcaactccagagccccagagttcaccttccccagcagccagt
tctccagacctcaccacaactaacacaaccagtaccatgcacccacaacaaaccgccgac
caggaccaggaccaagccgcagacacaccatcaatcaatggagaacctgagagcggcagt
gctccgataaacggaggaacagaaccagtcacaccaacaagagattcagtttttgaagac
gaaggtgtggggacgcatcctacagctgctcagccagctgaagaaggggacaaaccagag
agcagtccaaattcagccgagtcagagacgaccgaaggagaggagggagagcgtcaacca
acacagatgcacagcgaaacagcctttcttccaggaggtgagtacccagcccaccctgtc
accgagcagacggaggtgcccccacccagagtcagaacagagggtcagcagatgaatggc
atcattgaggaccgctcctctgtttcctccacagatatgctggatgctgaggccctgcag
ggaccccacagtgccgcccgcttctctcacatcctgcagaaagacgccttcctggtgttt
cgctctctctgcaaactctccatgaagcccctcgctgatggaccaccagacccaaagtcc
catgagctgaggtccaagattgtatccctgcagctgctgctgtctgtgctgcagggcgcc
gggcccgtgtttcgcacccatgagatgttcgtcaacgccatcaaacagtatctgtgcgtg
gcgctgtccaaaaacggcgtctcctccgtgcctgaggtctttgagctctcactggccatc
ttcctcacattgctgtcccactttaaggtccacctgaagatgcagatagaggtgtttttc
agggagatttttctgaccatcctggagacatcgaccagctcctttgagcacaagtggatg
gttatccagacactaacacgcatctgtgcagatgcccagtgcgtggtcgacatctacgtg
aactacgactgtgacttgaatgccgccaacatcttcgagcggctcgtcaacgacctgtcg
aagatagctcaggggaggagtggtcaggagctcgggatgactcctctgcaggagctcagc
cttcgtaaaaagggtctggagtgtctggtgtccatcctcaagtgtatggtggagtggagc
aaagacatgtatgtcaatccaaaccttcaagctaacctgggccaggagcatccgtctgat
agtgacggaggagagctgaagcttccagagcagctggcaggacgtcgagacagcatcagc
tcactggactccaccgtctcctccagcgtcacggcttcgcaggcggaccatccggagcag
tacgaggtcatcaaacagcagaaggacatcatcgagcacggcatcgaactcttcaacaag
aagccgaagcgaggtatccagtacctgcaggaccagggcatgctgggttccacagttgag
gacatctcccagttcctgcaccaggaggacagactggacactacccaggtgggagagtat
ctgggcgagaacatcaagttcaacaaagaagtcatgtactgctacgtggaccagttagac
ttttgcgggagggactttgtctctgcactcagagcgttcctggaaggcttcaggctgcct
ggcgaggcccagaagatcgacaggctgatggagaagtttgctgcccgatacctagagtgc
aaccagggacagactctgtttgccagtgcagacactgcctacgtgctggcatactccatc
attatgctcaccacagacctgcacagtcctcaggtgaagaacaagatgacgaaggagcag
tacatcaagatgaatcgtggtatcaacgacagtaaggacctgcctgaagagtatctatcc
tccatatacgatgagatcgcgggcaagaagatcgccatgaaggagagcaaagagttctcg
atcacaccaaagtccaccaagcagagtgtagccagcgagaagcagcgtcgtctgctgtac
aacatggagatggagcagatggcaaagacagcgaaagctctgatggaggctgtcagccac
gctcaggcccccttcttcagcgctacacacctggagcacgtcaggcccatgttcaagctg
gcgtggacgcccttgcttgcagcgttcagtgtgggactgcaggactgtgatgacccggag
gtggcctcgctgtgtctggagggcattcgatgtgccatcaggatcgcctgcatcttcagc
atgcagctggagcgagatgcgtacgtccaagccttggccagattcaccctgctgactgcc
agttccagcatcacagagatgaagcagaagaacatcgacactatcaagaccctaatcact
gtggcccacactgacggaaactacctgggcaactcctggcatgagatcttgaggtgtatc
agtcagctggagctcgcccagttgatcggcacgggggtaaagacacgttacatctcaggt
gtggtccgagacaaggaggccggcatcaagggcttaccctccggcacagaggagttcatg
cccctggggctgggtaacttggtgggaagtcaggacaagagacagatggctcacatccag
gagtcggtaggagagacgagctctcagagcgtggtcgtggctgtggacaggattttcact
ggctccaccagattagatggaaatgcaattgtggactttgtgaggtggctgtgcgcggtg
tccatggacgagctggcctcagcgcaccagccgaggatgttcagcttacaaaagatcgtg
gaaatctcctactacaacatgaaccgcatcaggctgcagtggtctcgaatttggcaggtc
ataggagaccacttcaataaggtgggttgtaaccccaatgaggatgtagccatctttgct
gtggactctctgaggcagctctccatgaagttcttggagaaaggagagttggccaatttc
cgcttccagaaagacttcctcaggccttttgagcacatcatgaagaagaacaggtccccc
actatcagagatatggtgatcaggtgtgtggctcagatggtaaactcccaggcggccaac
atccgttcaggatggaagaacatcttctcagtgtttcaccaggcagcctccgaccacgac
gagactatagtggagctggccttccagaccactgggcacattgtcatgaaaactttccag
gagcactttgcagctgctattgattccttccaggatgcagtgaagtgtctgtcagagttt
gtgtgcaacgcagcttttcctgacactagcatggaggctatccgactcatccgacactgt
gctaaatacgtctcagaaaggccacagaccctgagggagtacaccagtgatgacatgaac
gtcgcccccggtgatcgtgtgtgggttcgtggctggtttccaattctgtttgagctctct
tgtatcatcaaccgctgcaagctggatgtccggactagaggcctcacagtcatgtttgag
atcatgaagagttatggccacacgttcgagaagcattggtggcacgacctcttcagaatc
gtcttccgcatctttgacaacatgaagctccccgagcagcagacagagaaaactgagtgg
atgacaacaacatgtaaccacgcgctgtatgccatctgtgacgtgttcacccagttctat
gagcctctcagtgaaatcctgctggctgacattttcacacagctccagtggtgtgtcagg
caagacaacgagcagctggctcgatcggggaccaactgtctggagaacctggtgattctg
aacggggagaagttcagccccgacgtctggaaaatcacctgctcctgcatgctggagatc
ttccagaacaccagccctcacgctttgttgacttggcgaccggctggacaggatgaggaa
actacagatggcaaacattttgatgccgacttcgacagccagtcccagagcagctacgac
agagctctctctgagagaggacacagccagatgtccagcgacgacacctggaagggcaag
tccaacgcccgactgtcggaccagaagctgtttgcagggctgctcattaaatgcgtggta
cagcttgaactaatccagaccatagacaacatcgtcttcttcccagcaaccagcaaaaaa
gaggatgctgagaacatggctgctgcacagcgagatgctctggaggagtcggagtctgag
ggaggcgaggcgggtctggatcagggtatgtacagacacatgacttctgcacacctcttc
aagctgctggactgtctgctggagtcgcacaccttcgccaaggactttaactccaacaac
gaacagagaacagcgctctggagagcaggctttaaagggaaatccaagcccaacctgttg
aagcaggagacgagcagtcttgcctgcagcctgaggatcttgttcaggatgtactctgac
cgtcagctgcaggactcgtggcctgacatccagacacgcctgctgctggtgtgcagtgaa
gctctggcctacttcatcagtctgacttcagagagccacagagaggcatggaacagtctg
ctgatgctgctgctcaccaggacgctacggctgcccgatgacaagttcaagccgcatgct
tcctgctactacccccacctctgtgaaatgatgcagttcgacctgatccccgagctgcgg
gccgtcctcaggcgcttcttcctgcgcatcggctctgccttccacatcgctgcgcccgag
ggggtgtacgcccgaactccctcatcctaa
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