Larimichthys crocea (large yellow croaker): 104929270
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Entry
104929270 CDS
T04659
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104929270 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104929270 (xrcc4)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104929270 (xrcc4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF7783
Motif
Other DBs
NCBI-GeneID:
104929270
NCBI-ProteinID:
XP_010742042
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Position
III:complement(27178868..27204271)
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AA seq
296 aa
AA seq
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MSGTVRQIIVTTDPGTPYFLRVDWAVDLGAGFTLALTDGNSAWVGEVSEEEVTREADDMG
VTKEKYVEDLLQALTGSEGSRGKEEVYSFRLSPDHCHLSYQKICNDILVDLGSVELHPAP
DPLELNREMIGQSLKRSKDLESGNCELLEENRRLKQEHQRILRELEQQVQAKEVLEREMY
SRFVMVLNKKKAKIRGLQDAVRQLQQTDDQQRDREGRQSDNCDNDTTHGEDNSQERQEET
VQSFHPSQEATILITGRDLVCHGISLDRSFSDDEDEQPRRKQRLIHSLSPESREPE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtacagtccgacagatcattgtaactacagatccaggcaccccatacttcctg
cgagtggactgggccgtagacctgggtgctggattcacattagctctcactgatggtaac
tcagcatgggtcggagaagtttcagaagaagaggtgacaagggaagctgatgatatggga
gtcacaaaggaaaaatatgttgaggatcttcttcaagcactaacaggcagtgaaggaagt
cgaggcaaggaggaggtatattctttccgcctcagtccagatcactgtcatctctcgtat
cagaagatctgtaatgacatcttggtggacttgggttcagtggagctccatccagctcca
gaccctctagagctgaaccgggagatgattggccaatccctgaagcgcagcaaggatctg
gagtcaggcaactgcgagctgttagaggagaatcgcaggctgaaacaggagcaccagaga
atactcagagagttggagcagcaggttcaggctaaggaggtgttggagagggagatgtac
tcacgttttgtcatggtcctgaacaagaaaaaggccaagatcagaggtctgcaggatgct
gttcgccaactacaacagaccgatgaccagcagagagatcgagaggggagacaaagtgac
aactgtgacaatgacacaactcatggtgaagataacagccaggaaagacaagaggagacg
gttcagagcttccatccatcccaggaggcaactatcctcatcacaggtcgtgatctggtc
tgccacggcatctctctggaccggagcttctctgatgatgaagatgaacagccaagacgg
aagcagagattgattcacagcctgagcccagagtctcgtgagccggaataa
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