Larimichthys crocea (large yellow croaker): 104929322
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Entry
104929322 CDS
T04659
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104929322
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104929322
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
104929322
NCBI-ProteinID:
XP_019125306
LinkDB
All DBs
Position
XII:21125500..21256659
Genome browser
AA seq
2360 aa
AA seq
DB search
MTSEECPVPLGSISSAGPGQSEEYSSAHADDIIEEVGPGDDVSIGSDLSTLVVPFPELAP
VVFFCLKQTTCPRNWCIRMVSSPWFERISIMVILLNCVTLGMYQPCENIDCTSDRCQILQ
AFDAFIYIFFALEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSA
IRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLR
NRCYLEENFTLSSGMTLPAPYYQPEEDDERPFICSLPSDNGIMSCSDVPARREGGRTCCL
DREDALHRQALGLSPEPLVNGSAGEAMGLCINWNQYYTRCHTGNSNPHKGAINFDNIVYA
WIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETKQ
REHQLMQEQRAQCLSSSTLASMAEPGDCYEEIFQLVCHVLRKAKRRSAALYYTLRGKPPP
AGGGRGNRRGGGNVNGERHHSRHPRSSHCPHQSKQDHSSQPLANSISLAVPQNPEECHLC
VKEGARAVEDSPKREEDEEDTVKETSKEENHLEERGDEERKKKRTCFGHCKDIWNDMRRR
LWGIVESKYFSRGIMIAILINTISMGIEHHNQPDELTNVLEICNIVFTSMFTLEMILKLT
AFGFFEYLRNPYNIFDGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQL
VVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTDAGDTVPDRKNFDSLLWAIV
TVFQILTQEDWNMVLYNGMASTTPCAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDAN
RSYSDDDRSSCNFEENDKQKDSLHLSDPKICTLTPNGHLDLSQLPPGLFPGERLTFALGS
RKNSVISLGRANLEQRALFPGRGYHNWGRPLPPHPQALWARRSSWNSLGGCRPCSSSSQS
TSPAFTPTSARPFYGYGLGGLGGVVGGSLRIRGPRASSSPHRHLYHVQPDEEESLLSPPA
VAPHSLHLPHPMLPGHFVPRRDRRALSLELPHLLQVPGPPHPPPPPHHPLRPMALHAHQR
KKSFSGAMVTSGGGGGGGLDNLGGLGGVHQDCNGKTPLSQLLQPPPRHPAEQAGGRADPQ
SQLMTDVFPQVNTRSKDREDLDDDIDYSLCFRIQKMLEVYRPDWCETREDWSVFLFSPQN
KFRQICQSIIAHKLFDYVVLAFIFSNCITVALERPKILQGSLERVFLTISNYIFTAIFVG
EMTLKVVSMGLYVGEQAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRT
LRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCFGTD
VKNITNKSDCLQANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQP
VTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEK
KRRKAQKLPYYASYGHIRLMIHTLCTNHYLDLIITFIICINVITMSLEHYNQPHSLDLAL
KYCNYFFTSTFVLESVLKLIAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEISAALPI
NPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE
LFGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDHGTDV
DYACNPSLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELEL
AQGTLCCMGAPSCGGARMDKGLVAAGSGPGGTAGAKERGSARGERGEGGRKMRHSSATAH
SGAYSSRDSSRTLYSPAQESQWLDSVSLLIKDTLEGEMLMIDNLSGSVFHHYSSPPPICK
DCKGHPQEHIRMAEIEQASLKSEQLSDKSSSPALPDDLSLDEHTAYQLMVREGKGRCSSD
SRSSEEAGGGGSDAGGHQTQTVVQSQVQGFGQSCRALSTGSDEETALQEMEMQTHQPHMC
SPQCSPGGVSSSSNEGRNKEGEGGASGISPLFHLPAEFFHPAAAAIPAPPRLRLSRGIRL
TSPASWASLRSPGAHSRMLCTQYPSHSDSSLATGSSEGSLQTTLEEGLSFSVSPPQLPTA
TLPLVCPLQQPEDSTAISSPVQTLRPRPSPSSAVTLRATRGHQRSQSSGRGSTSPGYTRD
DSIDPSDEDLGIGIGSSIGGCGSSQAGNSEHLSETLSSLSLTSLLSPSSLVYPGGAVKKC
NSTGSLEQGGMLLSSRGREGRREILGLELMDPQGFLANPWTGVLVDTRRGEGTGAIGDGE
QGFKGKSSSQTTVGPCRKNR
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggagtgtcctgtgccgctggggagcatctcctcagcagggccagggcag
agtgaggaatacagttcagcacatgctgatgacatcattgaggaagtgggtccaggtgat
gatgtcagtatcggcagtgacctaagcacccttgtggtgcccttcccagagctggcacct
gtggtcttcttctgccttaagcagaccacctgccctcgcaactggtgcatccgcatggtc
tccagcccgtggttcgagaggattagcatcatggtgatcctgctcaactgtgtgacactg
ggcatgtaccagccctgtgagaacatcgactgcacctcggaccgctgccagatactgcag
gccttcgatgcattcatctacatcttctttgcattggagatggtggtaaagatggtggct
cttgggatctttggccgtcgctgttacctgggagacacttggaacaggctggacttcttc
atcgtcatggctgggatggtagagtactcactggacctgcagaatatcaacctgtcggcc
attcggacagtgcgggtgcttcgtcctctcaaagccatcaacagagtgccaagtatgcgt
atcctggtgaacctgctgctggatacacttcccatgctaggcaatgtgctgctgctctgc
ttcttcgtcttcttcatcttcggcatcatcggcgtgcagctgtgggcggggctactgagg
aaccgctgctaccttgaggagaacttcaccctctcttcaggtatgaccctaccagctccg
tactaccagccagaggaggatgacgaacgcccctttatctgctccctgccatctgataat
ggcatcatgtcatgctctgatgtgccggcaaggcgcgaaggaggacggacatgctgcctg
gacagggaggacgcactccatagacaggctctgggcctgagtcctgagccgctggtcaac
gggagtgccggtgaagcaatgggtctgtgcatcaactggaaccagtattacactcgatgc
cacacagggaatagtaaccctcataaaggtgccatcaactttgacaacattgtctacgcc
tggattgtaatttttcaggtgatcactctggagggctgggtggaaatcatgtattatgta
atggatgcccattccttctacaacttcatctactttattttactcatcattattggttca
ttcttcatgatcaacctgtgcctggtagttatcgccactcagttctccgagaccaaacag
cgggaacaccagctgatgcaggagcaaagggcacagtgcttgtcctcatccaccctggcc
agcatggctgagccgggagattgctacgaggagatcttccagctagtctgccatgtcctc
cgcaaggctaagaggagatcggcagctctctactacacgctgaggggcaagcccccacca
gctggtggaggcagaggtaacaggcgtggtggagggaacgtgaatggagaacggcatcat
tccaggcacccaagatcttcccactgcccacaccaaagcaaacaagaccacagctctcag
ccactcgccaactccatcagtttggccgtccctcagaaccctgaggaatgtcatctatgt
gtgaaagagggggcaagggctgtcgaagactcccccaagagggaagaagatgaggaagat
acggtcaaagagacgagcaaggaggagaaccatctagaggagaggggagatgaggagagg
aaaaagaaaaggacatgctttgggcattgtaaggacatttggaatgatatgaggaggaga
ctttggggcattgtggagagcaagtacttcagcaggggcattatgatcgctatccttatt
aacaccatcagtatgggcatcgagcaccataaccagcccgatgagctgaccaatgtcttg
gagatctgcaacattgtcttcaccagcatgttcaccctggagatgatcctgaagctgact
gcctttggcttctttgagtacctgaggaacccctataacatctttgatggcatcattgtc
atcatcagtgtgtgtgagatcatcggccaggcagacggtggcctgtccgtcctaaggact
ttcaggctgctgagggtcattaagctggtgaggttcatgcctgcgctgaggcggcagctg
gtggtactgatgaagaccatggacaacgtggccactttctgtatgctgctcatgctcttc
atcttcatcttcagtatccttgggatgcatatctttggttgtaagttcagcctgaagaca
gacgcaggagacacagtacccgacaggaagaactttgactccttgctctgggccattgtc
actgtctttcagattttgactcaggaggactggaacatggtgttgtacaacggcatggca
tctaccacgccctgtgctgctctctactttgtagcacttatgacatttggaaactacgtg
ctcttcaatttactagttgccatcttggtggagggtttccaagctgagggtgatgcaaac
cgctcttactccgacgacgacaggtcttcctgtaattttgaagaaaatgataagcagaaa
gactctctgcatctctcagacccaaagatttgtacactaacccctaatgggcacctggac
ctgtcccaactgccccctggactgtttccaggagagaggttgacctttgctcttggctcc
aggaagaacagcgttatttctcttggcagggccaacctggagcagagggctttgtttcca
ggtcgaggttaccacaactggggccgtcctctgcctccccaccctcaggccttatgggcc
cgtcgttccagctggaacagcctcggaggatgtcgcccctgctcttcctcatctcagtcc
actagtccagccttcacccccacctctgcaaggcccttctatggctacggtctcgggggt
cttggtggagtggtcggaggaagccttcgtatccggggtccccgtgcctcttcatcccca
caccgccacctctatcatgtccaaccagatgaggaggagtctctcctctctcctcctgct
gttgctccacactctcttcaccttccccatcctatgctcccaggccactttgtgcccagg
agggaccgcagagctctttcactagaacttccccacctgctgcaggtcccaggaccccct
catcctcctccgccgccacaccatccactgcgccccatggcgctccatgctcaccagagg
aagaagagcttctctggggcgatggtaaccagtggtgggggtggtggcggcgggctcgac
aatctgggtggcttgggaggggtacaccaagactgtaatgggaagactcctctgtctcag
cttctccagcctcctcctagacatccagcggaacaggctggaggaagggcggacccccag
agtcaactgatgactgacgtctttccccaggttaacacacgcagcaaggaccgggaagac
ctggatgatgacattgactatagtttgtgcttccgcatccagaagatgttagaagtgtac
agaccagactggtgtgagaccagagaggactggtctgtcttcctattctccccacagaac
aagttcagacagatctgtcagtccatcattgcccataagctgtttgactatgtggtattg
gccttcatcttctccaactgcatcacagtagctctggagagacccaagatactacagggc
agcttggaaagagtcttcctcaccatctccaactacatctttactgccatctttgtgggc
gagatgacactcaaggtggtttccatgggtctgtatgtgggtgaacaggcttatctgcgg
agcagctggaacattctggatggcttcctggtttttgtgtctctgattgacattgttgtg
tccatggcgggtggagctaagatcctgggtgtgcttagagtactcaggctgctcagaaca
ttacgtcccctcagggtgatcagcagagctccaggcctaaagctggtggtggagaccctc
atcacctccctcaaacccattggcaacattgtcctcatctgttgtgcattcttcatcatc
tttggtattctaggtgtacagctgtttaaaggcaaattcttctactgctttggcaccgat
gtcaaaaacatcaccaacaagtctgactgtctgcaagccaactacaagtgggtccaccat
aagtacaactttgacaacctggggcaggctctgatgtccctgtttgttctcgcctccaaa
gacggctgggtcaacattatgtatcatggcctggatgctgtgggtgtggaccaacagccg
gtgaccaacaacaacccatggatgctgctgtactttatctccttcctcctcatcgtcagc
ttctttgtcctcaacatgtttgttggcgtggtggtcgagaacttccacaagtgccgccag
caccaggaggtggaggaggccaaaaggcgcgaggagaagcgtcagcggcgcatggaaaaa
aagaggagaaaagcccaaaagctgccctactatgccagctatggccacatacgcctgatg
atccacacactgtgcacaaaccactacctggacctcatcatcaccttcatcatctgcatc
aacgtcatcaccatgtccttagagcactacaatcaacctcattctctggatctcgccctg
aagtactgcaactatttcttcacctccacttttgtgctggaatcagtactcaaactcatc
gcctttggctttcgccgctttttcaaagacaggtggaaccagttggacctggccattgtg
cttctgtcagtgatgggcatcactttggaggagattgagatcagtgccgccttacccatc
aaccccactatcatcaggatcatgagggtactgaggatagctcgagtgctgaagctgctc
aagatggcgacaggaatgagagccctgttggatactgtggtccaagccctgcctcaggtg
ggtaacctgggcctgctcttcatgctgctgtttttcatctacgccgccttaggagtagag
ctttttggagaacttgtttgcaatgcagactacccatgtgaaggaatgagtcgtcacgct
acctttgaaaactttggcatggccttccttaccttgtttcaagtctccacgggcgacaac
tggaatggcatcatgaaggacacattgcgggagtgcccaccagaccacggcaccgatgtg
gactatgcctgcaatcctagccttcagtttatctcgcccatgtactttgtctccttcgtg
ctcaccgcccagttcgtgctcatcaatgtggtggtggccgtgctgatgaagcacctggac
gactccaacaaggaggcccaagaggaggcggagatggatgcagaaattgagctggagctg
gcccagggcaccctctgttgcatgggcgcccccagctgtgggggtgcaaggatggacaaa
gggttagttgctgctggatcggggcctggaggcacagcaggggcaaaggagagaggaagt
gccagaggagagaggggagaaggagggagaaagatgcggcattcatcagccactgcgcac
tcaggggcgtacagctcccgtgactccagccggaccctgtactcaccagcacaagagagc
cagtggctggacagcgtgtctctcctgatcaaggatacactggagggggagatgctgatg
atcgacaacctctccggttctgtcttccaccactactcctctcctccacccatctgcaaa
gactgcaagggccacccacaagagcatatcaggatggcagagattgagcaggcatcactg
aagtcagagcaactgtcagacaagtcctcgtctcctgccctgccagatgacctcagcctg
gatgaacacactgcctatcagctaatggtgcgagagggcaagggaaggtgcagcagcgac
tctcgcagctctgaggaggctggaggtggaggaagtgatgcaggaggccaccagactcag
accgtggtgcagagccaggtgcaggggttcggtcagtcctgccgggccctcagcactggc
agtgatgaagagacggcactgcaggagatggagatgcaaacacaccaaccacatatgtgc
tcacctcagtgtagccctggtggcgtttccagcagcagcaacgagggaagaaacaaagaa
ggagaaggaggagccagtggcatttctcctctcttccatctgcctgcagagttcttccac
cctgcagcagcagccatcccggcacctccacgtctacggctgtcgaggggcattaggctg
acttccccagcctcttgggcttcgctccgctccccaggagcccatagcaggatgctctgc
acacagtacccatcccacagtgactcatccctagctacgggcagttctgagggcagcctc
cagaccaccctggaagaaggactgagcttcagcgtctctccaccacagttgccaacagca
acgttaccactcgtgtgtccactccagcagcctgaagacagcacggccatttcctctcca
gtccagactctgagaccaaggccaagcccctcatcagccgtcaccctacgggccaccagg
ggccaccagcggagccagagcagtggccgaggtagcacaagtccgggctacacccgtgac
gactcaattgacccttcagacgaggaccttggcataggcattggatcgtcgattggtggc
tgtggctccagccaagcgggcaacagtgaacacttgtcagagacactgagcagcttgtcg
ctgacatcactgctgtcgcccagctccttggtgtacccaggaggagcagtaaagaagtgc
aacagcacaggcagcctggaacaaggggggatgctcctatcgtcccggggcagggagggc
cgaagggagattttgggcctggaacttatggatccccaaggctttttggctaacccctgg
acaggggtattagttgatacaagaagaggagaaggaacaggggcgataggagatggcgag
caagggttcaaagggaagagctcaagccagacaacagtagggccttgtcggaaaaataga
tga
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