Larimichthys crocea (large yellow croaker): 104929423
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Entry
104929423 CDS
T04659
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104929423
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104929423
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
FPP
AAA_29
Crescentin
AAA_21
TMF_TATA_bd
XhlA
DUF7310
AAA_16
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
104929423
NCBI-ProteinID:
XP_010742241
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Position
XXIV:complement(2160756..2175457)
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AA seq
1094 aa
AA seq
DB search
MSKRKGKVIGDAPAVKSRRLTAAGLKDAAEETNHQRPSSSSSSGGGGGFSHSATGDIGLI
ESVTLKNFMCHHLLGPFQFGPNVNFITGNNGSGKSAILTALIVGLGGKATFTNRGVSLKD
FVKTGENTADITIKLRNRGPDAYKRDVYGDCISVEHRISCDGCRTCRLKSKSGQLISNKK
EELMAILDHFNIQLDNPVSILNQEMSKQFLHSKSESDKYKFFMKATLLEQMKRDYIHIKH
TKTVTRQQVERQEESLKDLKLEFLQKKERYENLSSFSEMKVVLENLKKAMAWCLVQEKEQ
LVQQLKEDIENEENNYKHQDNLQLCQTRVTHIEKKLQCIRGRVDGLREEQESLSGDSLRL
KEQVKIISKAHKEQEIVYVRALNKLKQSEQEQDILQEKINKAKTSGSLSNNGETEYTEQQ
EKISSLREQLAELEKTCSQLNQEIKNKHQALFKGKEERDKLRMEERNIQVLYASKLKRKN
QLLASRSNKLKRFGDHVPDLLESIDEAYAKGRFLKRPVGPIGVCISLKDPTLAVAVECCL
RSFMKAFCCDNYKDELVLQELMSRYYPKGNRPQIIVSPFSEKVYNIHGRKAHHPEYPSVL
DTITASNPVIINCLIDMRGIESILIIKEKDKARKVMQQGRPPKNCREAFTIEGDQVYPNR
YYTSDFSMAKYLGGDLETEISMLESDLENLQAQLSRFQLHATFVSEEIVSMEGELNSTIM
TLKKTLASVNQVKATITELETAGEEQIDDISSLEEVAQENRQKIEAEKQTVHEAKTELDK
HRETVEEAESKYASVRERIDQLPEDVEPLKDEQMKLEAECAKHERNLKVLENKLKAHEDN
IQAMKSDLTHREEELQEYVAKATEISPERQQVIGTTKSIDAEITRLKRTIKVYESSHGEH
QQVVREYAEALALYRQKSNQVRDLRRFIDRLDNIMSDRQNRYKVMRRSLSVRCKLYFNNF
LIKMNCCGSMVFDHNNETLSISVKPPGREDDGVSDMRSLSGGERSFSTVCFMLSLWEITE
SPFRCLDEFDVYMDMHNRRISLDLLLELSERQHLRQFVFITPLNTRNLPKTSFIKIHQLQ
DPERVQSETGDEDV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggaaaggcaaagtgatcggcgatgcgccagctgtcaagagccgccgactg
acagctgcaggtctcaaagatgcagcagaagaaacgaaccatcagagaccatcatcatca
tcctcctccggcggcggcggcggcttctctcactctgccacaggagatatcggcctcatt
gaaagcgtcactctgaagaatttcatgtgtcaccacttgctcggcccgttccagtttggg
cccaacgtgaatttcatcactggcaacaatggaagtgggaaaagtgccatcctgactgct
ttgatcgtaggcctcggtgggaaggccacgttcacaaacagaggagtgtcgctgaaggat
tttgtaaagaccggcgaaaatactgcagatataacaataaagctgagaaacagaggacca
gatgcttataaaagagacgtctacggcgactgcatctcagtcgagcatcgcatctcatgt
gacggttgtcggacctgcagactgaagagcaaatcaggacaactcatctcaaacaagaag
gaagagctgatggccattctggaccacttcaacatccagttggataacccggtgtccatt
ctcaaccaagaaatgagcaaacagttcctgcattcaaagagtgaatcggacaagtataag
ttcttcatgaaagcgactctgctggaacagatgaagagggattacatccacatcaagcac
actaaaacagtcacaagacagcaggttgagagacaagaggagagtctcaaggacctgaaa
ctagaatttctacagaagaaagaaaggtatgaaaatctgtcatcgttcagcgagatgaaa
gtggttctggagaatctgaagaaagccatggcgtggtgtttggttcaagagaaagaacag
cttgtgcagcagctgaaggaggacattgaaaacgaagagaacaattacaaacatcaggac
aaccttcagctctgtcagactcgggtcacgcatatagaaaagaaacttcagtgcatcaga
ggcagagttgacggtctgagggaggaacaagagtctctgtcaggagacagtctcaggttg
aaagagcaagtgaagatcattagcaaagctcacaaggaacaggagattgtctacgtccgg
gctctgaacaaactcaaacagtcagagcaagagcaggacattcttcaggagaaaattaac
aaggcaaaaacaagcgggagcctaagcaataatggagagacagaatacacagagcagcag
gagaagatatccagtctgagagagcagctcgccgagcttgagaaaacatgttcgcagctg
aatcaggagatcaagaacaaacatcaggcgcttttcaaagggaaggaagaacgagacaag
ctgagaatggaggagagaaatatccaggttctgtacgcgtccaaactgaagaggaagaat
cagctcctcgccagtcgctcaaacaaactgaagcggtttggagatcacgtgccggacctg
ctggagtcgatcgatgaagcgtacgccaaaggacgcttcctcaagaggcccgtcggtcca
ataggggtttgcatcagcctgaaggatcccacgttggccgtagccgtggagtgctgtctg
cggagcttcatgaaggctttctgctgtgacaactacaaggatgagttagtcctccaggag
ctgatgtctcgctattatccgaagggaaacaggccgcagatcatcgtcagccctttctct
gaaaaagtttacaacattcacggacggaaagcacatcatccagagtacccgtctgtgctg
gacacgatcacagcatcaaacccggtcatcatcaactgcctgattgatatgagggggata
gaatcaattctgataatcaaagaaaaagacaaagccaggaaggtcatgcagcaaggacgg
ccgcccaaaaactgccgtgaggccttcactatcgagggagatcaggtgtatccaaaccgt
tactacacctccgacttcagcatggccaaatatcttggtggagatctggagactgaaata
agtatgttggagtccgacctggagaatctccaggctcagctgtccaggtttcagctccac
gcgacctttgtgtctgaggaaatcgtgagcatggagggcgagctgaacagcaccatcatg
accctgaagaagactctggcctctgtgaatcaagtcaaggcaacaataactgagctggag
actgccggtgaggagcaaatcgatgacatcagctccttggaggaagttgcccaagagaac
agacagaaaatcgaggcagagaagcagactgtccacgaggcaaagacggagctggacaag
catcgggaaacagtggaggaagcagagtccaagtacgcttctgttagagagcggattgat
cagcttcccgaggacgtggagccgttaaaggacgagcagatgaagctggaggctgagtgt
gcaaaacatgaacgaaacctgaaggttttagagaacaaactcaaggctcacgaagacaac
attcaagctatgaaaagtgaccttacccatagagaagaagagttacaggaatatgtggcc
aaagccacggagatcagcccggagcggcagcaggtgatcggcaccaccaagagcatcgac
gcggaaatcactcggctgaagaggacgatcaaggtgtacgagagcagccacggggagcac
cagcaggtggtcagagagtacgccgaggccctcgctctctacagacagaaatccaaccaa
gtgagagatctgcggaggttcatcgatcgactcgacaacatcatgtcagacaggcagaac
agatacaaagtaatgcgccggtcgctctctgtcagatgcaagttgtacttcaataacttt
ctgataaagatgaactgctgtggctccatggtgtttgaccacaacaatgaaacgctatcg
atctcggtaaagcctccgggcagggaggatgatggtgtgagtgacatgaggtcgctgtcg
ggtggtgaacgctccttctccacggtttgtttcatgctctccctttgggagatcacagaa
tctcccttcagatgcctcgatgagttcgacgtctacatggatatgcacaatcgcagaatc
tccctggatctcctcctggagctgtcggagcggcagcaccttcgacagtttgtcttcatc
actccgctcaacacaagaaatctacccaaaaccagcttcatcaaaatccaccagcttcag
gatccggaaagagtccagagtgaaacgggggatgaggacgtgtga
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