Larimichthys crocea (large yellow croaker): 104929426
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Entry
104929426 CDS
T04659
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104929426 (aff3)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104929426 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
104929426
NCBI-ProteinID:
XP_019119561
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Position
XVIII:20738387..20753464
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AA seq
1231 aa
AA seq
DB search
MPTVLSGKGKLSVVCFLLRCAYSQVTRSQHNSCAKDILEDMTQSWPSQQALGGDQAQRIL
YNSKEAKLPSTHQRQSRGDVQLRMTRRPHVAPHKSMLADDLKLSSDDEDTQRVTHESSSW
DGHSLSAQRAHTHGRRVRHSSSDSSASDCSAESARSSSSSSSNLHSRSPSRSPEVNPDPP
SPANTTRPPCNSKETDRPSAAHWQLDKWLKKSQKKSSRSEQESSQSIPGRLPSPHTQRAP
SPARSWDSNQEYSPSQSPIPSPQFHYSNNNSPLPSPGYSYCPSPSPFPSTCPSPSPSPRH
SLILSPVPSVCPSPRGSPGASRSPSPIPRGPPRSPSPSLPAPSRVCHYPEVQSQNQTQPS
LTTNAHRTKNRSWIAPPPNTDTKCKPANSTHLQTPHQHRPKAQLTQKQDQSQSKPKAPAA
LNSNQSNSHKSRPKPNFHSGSKQLSEAPKAKHVPQFEQIQSSRSNQNSNHKLRPSFQSSS
QHSPTRAKHLAPTSREPNPGHSSHSQSPSKSAANSNTGLNSRSNPSLKPPRAKSCEAAAP
TPVHDNHTKATPKKPQYKEQEVEHRGEHLTQTDGRKQERKQERQKDKQQGKQERKQDRRL
AEEQLLRRPWIQSSAEEEEEEEEEEEKEEEVIERQRKREETSRGENSRRREQQHRREWQT
RPKPRQRLQDESHQQGRTKKLGRSEEEKQDPSPPSPRSSTPRIPSSSSSASSSSDSDSEP
ECRAPITKVPADSTSHKRPDPKRGTSDASGSKVVHPRGSTSGNPSEGKQKLYTLVPFGRA
EKATAPAQRGLRNLVVQIDLCLLKRVPDSTTGPVVKKAPCSSSSSSTKDKQREAMKHLYV
PETATKDGKRKRKLENGVSHKESKRSVPHTNDLSGRTESSAHTAEHSFVTETTHNGYLEE
YLDSKRPLSPLSPLSVSSESAKPPSKTKTVEQPHVHKNRDKKSDSAIKPKMEVECVKVSK
QPHPPSESWGPAGHRGTVPNHETPHHAEYYLHEAKRMKHRADAMVDKLGKAVNYMDAALS
FMECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLAL
LYWQMFRLKKDHALKYSKVLLDYFKSSPKVPSTPPCWSDSGKGAGGLPSSLSPNAKHPRQ
GSHGGSNNLPSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAKENKEFFNYLNTL
SGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcagtggcaaagggaaactttccgttgtgtgttttctactccgatgc
gcgtattctcaggtaacacgaagccaacacaacagctgtgccaaagatattctggaggac
atgactcagtcctggccgtcccagcaagccttagggggtgaccaggcccaacggatcctc
tacaactctaaggaggcaaaactaccaagtacacaccaaaggcaaagtcggggggatgtt
cagctgcgaatgacccgacgccctcacgtggcacctcacaaatcgatgctcgctgatgac
ctgaagctgagcagtgacgatgaggacactcagcgggtaactcatgagtcgtcttcctgg
gatggacacagcctgtcagcacagcgagcgcacacacatggcagacgggtgagacattcc
agctccgactcttcggcctctgactgctccgccgagtccgcccgcagcagcagcagcagc
agcagcaaccttcactccaggagccccagccggagtccagaagttaacccggatccaccg
tcgcccgccaacacaacacggccgccgtgcaacagcaaggagactgaccgcccctctgct
gcccattggcagttggataaatggctgaagaaatcccagaaaaaatcttccaggagtgaa
caggaatcctcccagagcattccaggacgccttccttctccccacacccaacgagcccca
tctccagcaaggtcctgggacagcaatcaggaatacagccccagccaaagccccattcct
agcccacagttccattacagcaacaacaacagccctttacccagccccggttatagctac
tgtcccagtcccagcccattccccagcacctgcccaagtcccagccctagcccgaggcac
agcctgatcctaagtccggttccaagtgtttgtcccagtccacgtgggagcccgggagcc
agccgtagccctagtcctatacctaggggccctccaagaagccccagtcccagcttacct
gctccttccagggtttgtcactaccctgaggttcagagtcagaaccaaacacaacctagc
ctaacaaccaatgcccacaggacaaaaaataggtcatggattgccccgccgcctaacacc
gataccaagtgcaagcctgcgaacagtactcaccttcagacgcctcatcaacaccggccc
aaggctcaactcacacagaaacaagaccaaagccaaagcaaacccaaggctcctgctgcg
ttaaactcaaatcagagcaacagccacaagtctagacccaagcctaacttccattcaggt
tctaaacagctctccgaggctcccaaagccaaacacgtgccacagtttgagcaaatccag
agtagcagatctaaccaaaactccaaccacaagctcaggccttcgtttcagtctagctca
caacacagtcccacaagggcaaagcacttagctcccacaagccgtgaacctaaccctggc
catagttcccattcccaatctccctctaaaagtgctgctaattctaatacagggttgaac
tctagatcaaaccctagcctaaaacctccaagggccaagtcttgcgaggctgcagcccca
actcctgtgcatgataaccatacaaaagcaacaccgaaaaaaccccagtacaaggagcaa
gaggtggaacacagaggagaacatctgacccaaacagacgggagaaaacaagagagaaaa
caggagagacagaaggacaaacaacaagggaagcaggagagaaagcaagacaggaggctg
gcggaggagcagctactgagacgtccctggatccagagttcagcagaagaagaggaggag
gaagaggaggaggaggagaaggaggaagaagtgatcgagaggcagaggaagagagaggag
acatcaagaggggaaaatagtcggaggagggagcagcaacatagacgcgaatggcaaacc
agaccaaaaccgagacaacgccttcaggacgagtcacaccagcaggggaggacaaaaaag
ttaggcaggagtgaggaagagaagcaagacccttcacctccttcaccacgctcctctact
cctcgcataccgtcctcctcgtcctctgcctcctcctcttcggattcagattcagaacct
gagtgtcgggctccgatcaccaaagttccagcagactctacctcccacaagagacccgat
ccgaagagaggcacgtctgacgccagcgggtcgaaggtggtgcaccccagaggatccact
tcgggcaatccgagcgaggggaagcaaaaactctacaccttggtcccgttcgggcgagct
gaaaaagctacggcacctgcccagcgggggcttagaaacctggtggtgcagatagacctc
tgtctcctcaaaagggtcccggacagcactactggccctgttgttaaaaaggccccctgt
tcctcctcttcttcatccaccaaggacaagcaaagagaggctatgaaacacctgtacgtc
ccagagactgcgacgaaagacggcaaaaggaaacgcaagttggagaatggtgtgtcacac
aaagagagcaagaggagtgttcctcacacgaatgacctctcaggccgcacagagtcttca
gctcacacggctgagcacagctttgtgactgagactacgcacaacgggtacttggaggag
tacttggacagcaagaggccgttgtcacccctctctccactgtccgtcagctccgagtcc
gccaagcctccctccaaaaccaagactgtagagcagccccatgtccacaagaacagagac
aagaaaagcgattctgctataaagcccaagatggaggtggaatgcgtaaaagtgtccaaa
cagccccacccaccatccgagtcctggggtcctgcagggcaccgggggactgtgccaaac
cacgaaactcctcaccatgccgagtactacttacatgaagcaaaaaggatgaagcaccgc
gctgatgcgatggtggacaagctcgggaaggctgtgaattacatggacgctgctctctcc
ttcatggaatgtgggaaagcgatggaggaagggccactagaggcaaagtctccttacacc
atgtactcagagacggtggagctcattaggtatgcaatgaggctgaagagccactccggc
cccggggcgagacaggaagacaaacagctggcggttctgtgtttccgatgccttgccctc
ctttactggcaaatgtttcgtttaaagaaggaccacgcactgaaatactccaaagttctg
ctggactacttcaagagttctcccaaagtgccttctacaccaccctgctggagcgactct
gggaagggagcaggaggacttccttcttcactctcacccaatgccaaacaccccagacag
ggttcacacgggggcagcaacaacttaccctctctcataagcattccccaacgcatccac
cagatggctgcaaatcacctgaacattaccaacagtgtcctgtacagctacgagtactgg
gaggtggcagacaacctcgcaaaggagaacaaagagttcttcaactacttgaatactttg
tctggacctttgactcttcacagtagcatcgctcacgcagtccaatacaccagacaggcc
cttcagtggatacgcatcagtgccaaacttaactaa
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