Larimichthys crocea (large yellow croaker): 104929499
Help
Entry
104929499 CDS
T04659
Name
(RefSeq) neurexin-3b isoform X6
KO
K07377
neurexin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104929499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104929499
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
104929499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Motif
Other DBs
NCBI-GeneID:
104929499
NCBI-ProteinID:
XP_019126004
LinkDB
All DBs
Position
XI:16518303..16790554
Genome browser
AA seq
1669 aa
AA seq
DB search
MNPNSLPGHVLLLLSTVLGLSVGLEFTGSEGQWARYLRWDASSRSDLTFQFKTSQSEGLL
LYFDDGGYCDFLLLAVSEGKLQLHISIDCAETTITSDKMVNDSRWHFAAINRHNLRTGLA
VDGQTKTEDVRPQRRFMKIVSDLFLGGLPGDIRTSAITLPSVRELPPFKGIITDLSYGSK
LPTLINSQKVRLEMMGLCTENPCENGGICSLADGETYCDCSKTGYVGRYCTEAVQRKPGL
AHLKAEQGRNKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGK
SADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNTWHDIKVTRNLRQQSGIGHAM
VTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNN
DIRLELSRLARIVDPKMKLQGDIAFKCENVPTLDPINFETPDSYLALPKWNTKRVGSISF
DFRTSEPNGLILFTHGKAQDRRDSKGQKNNKVDFFAVELLDGGLYLLLDMGSGTIKVKAT
LAKVNDGAWHHVDIQRDGRSGIISVNSRRTPFTASGENEILDLEGDLYLGGLPDNRVGLV
LPTELWTAMLNYGYVGCVRDLFIDGRSKDIRQIAQSQNMTGIKSSCSKVTGKQCDSNPCK
NNGACKEGWNRFVCDCTGTGFWDSTCEREASILSYDGSMYMKVVIPTVMHTEAEDVSLRF
MSQRAFGLLMAATSRESADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEVLYAGQKLND
NEWHSVRVVRRGKNFKLTVDDDMAEGQMAGDHTRLEFNNVETGILTERRFVSSAPSSFIG
HLQSLKFNGMQYIDMCKNGDIDFCELNARFGMRFIIADPVTFKTKGSYLGLATLQAYTTM
HLFFQFKTTSSDGFIIFNSGDGNDFIAVELVKGFIHYVFDLGNGPSLLKGNSDNPLNDNQ
WHNVVITRDASNTHTLKVDTKSVTQNVNGAKNLDLKGDLFIGGLGPNMYQNLPKLVVSRE
GFQGCLASVDLNGRLPDLINDALFRSGQIERGCEGPSTTCQEDSCANMGVCIQQWENFTC
DCSMTSYTGTHCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDRLAVGFSTTIKDGILVR
IDSAPRLGDYIMLHIEQGKVGVTFNIGTVDISVKETTTAVNDGKYHLVRFTRNGGNATLQ
VDNWPVNEHFPTGRQLTIFNTQATISIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHVN
IKVNGSVRLVGDVPTSRGGARTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDD
IVSSAECSSDDEDLEECDSGHAGGELVIPVLVEDPIDIPSVSTRSPFIPLPPTLRPVLTI
IETTKESLAMATEAGVPCLSDRGSDDCDDGDGGDDGDDDDDDGMVISGFGSGEAFDSSLP
PTDDEDFYNTFSLVTDKILTTSAYEGGYKALAPKWEAKDLRPSKASEAGRTTPTSPLPDP
RGTPPAAVPSDTPPKLPAGKMNNREVKPPQPDIVLLPLPTSFDQDGTKPRGPFITSPMLR
TVPAALPTVPGVRRVPPGASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEG
SYQVDETRNYISNSAQTNGAVVKDKTPSGSAKGSAGSKRPKDKDKEYYV
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaacagcctacctgggcatgtcctcctgctgctaagtaccgtgctgggcctg
agtgtaggtttggagtttactggctctgaaggtcagtgggctcgctacctgcgctgggac
gccagctccagaagtgacctgacatttcagttcaagacttcacaatcagaaggcctgctg
ctctacttcgacgatggcggatattgcgactttctgcttctggcggtgtccgagggcaag
cttcagcttcacatcagcatcgactgcgctgagaccaccatcacctctgacaagatggtc
aacgacagccgctggcactttgccgccatcaaccggcacaatttgcggactggcttggca
gtggatggccagaccaagacggaggatgtgcggccccagcgacggttcatgaagattgtc
agtgacctcttcctcggagggctcccaggagacatccgtacctctgccatcaccctgcca
tctgtccgtgagctaccaccattcaagggaattatcacagacctcagttatgggagtaag
ctgcccacgctcatcaacagtcagaaagtacgcttggagatgatgggcctttgcacagag
aacccctgtgagaatggagggatctgctcgctggcagatggagaaacctactgtgactgc
tccaaaacaggatatgtaggtcgatactgcacagaagcagtccagagaaaaccaggcctc
gcacacctgaaggcagagcaaggtagaaacaaagcaagggaggagaacgtggccaccttc
cgcggatcggagtacttctgctacgacctgtcgcagaaccccatccagagcagcagcgat
gagatcacgttgtccttcaagacctggcagcgcaacggcctccttctccacacgggcaag
tctgcagactatgtcaacctggcactaaaagatggggccgtctccctcgtcatcaatctg
ggttccggggcctttgaggccatcgtcgagccagtcaatggaaaattcaatgacaacacc
tggcacgacatcaaagtgacacgcaacctgagacagcaatcaggcattggacacgctatg
gtgactatctccgttgatgggatcctcacgactactggctacacccaggaagactacacc
atgctgggctctgatgattttttctacgtgggtgggagccccagcactgcggacttgcct
ggatctccagttagcaacaatttcatgggctgccttaaagaggtggtatacaagaacaat
gacattcgcctggagctgtcccgccttgcccgtattgtggaccccaagatgaaactccag
ggtgacatagccttcaagtgcgaaaatgttcccaccctcgaccccatcaactttgagacc
ccggattcctacctggccttgccgaaatggaacaccaagcgcgtgggctccatctccttt
gacttccgcacctccgaacccaacggtctgatactcttcacccacggcaaggcccaggac
cggcgggactcaaagggccagaagaacaacaaggtggacttctttgcagtggagctgcta
gatggagggctgtacctgctgctggacatgggctccggcaccatcaaggtcaaggccaca
ctggcaaaagtcaacgatggcgcctggcaccatgtggacatccagcgagatggacgctca
ggaatcatctctgtaaacagccgcaggacccctttcacagccagcggggaaaatgagatc
ttggacctagagggcgacctttatctgggcggtctgcctgacaaccgggtgggcctggtg
ctccccactgagctctggaccgctatgctcaactatggctatgttggctgcgtgcgggat
ctgttcatcgacggacgcagcaaggacatccggcagatagctcagtcccagaatatgacc
ggcatcaagtcttcgtgtagtaaggtgacagggaaacagtgcgacagcaacccctgcaag
aacaacggggcgtgtaaggaagggtggaaccgcttcgtctgtgactgcactggaacaggc
ttctgggatagtacctgtgagagagaggcatcgatcctgtcgtacgatggcagcatgtac
atgaaagtcgtgatcccaactgtcatgcacacagaggccgaggacgtctccctccgcttc
atgtcccagcgagcattcggcctgctcatggctgccacatcccgagagtctgcagatact
ctaaggctcgagctggacagcgggagagtcaaactgacggtcaacctagactgtgtcagg
ataaactgtaacaccagcaagggccctgaggttctttatgccggacaaaagctcaacgac
aacgagtggcactcagtacgagtggtccgccgcggtaaaaacttcaaactcaccgtggat
gacgacatggctgaaggtcagatggcgggtgaccacacccgtctggagttcaacaacgtg
gagacgggcatcttgacagagagacgctttgtctcatctgctccctcctccttcatcggg
catcttcagagcctaaagttcaacggtatgcagtacatcgacatgtgtaagaatggcgac
attgacttctgcgagctcaacgcccgctttggcatgcgcttcatcattgccgaccccgtg
accttcaagaccaagggcagctacctgggcttggccactctgcaggcctacaccacaatg
cacctcttcttccagttcaaaaccacctcgtccgacggtttcatcatcttcaacagcgga
gacgggaacgatttcattgccgtagagctggtcaaagggtttatccactacgtgtttgac
ctggggaacgggccgagtctgttgaagggaaacagcgacaacccactgaacgataaccag
tggcataatgtggtcatcacacgagacgcttccaacacacatacgctcaaggtggacaca
aagtcagtcacccagaatgtcaacggggccaagaaccttgacctcaaaggtgacctcttt
atcggaggtctgggacctaacatgtaccagaacctcccaaagctggtggtgtctcgggag
ggcttccagggctgcttagcctcagttgacctcaacggccgcctgccagacctcatcaac
gacgcccttttccgcagcgggcagattgagcgtggctgtgaaggcccaagtacaacctgc
caggaggactcttgcgccaacatgggtgtatgtatccagcagtgggagaacttcacttgt
gactgctctatgacgtcttacacggggactcactgcaatgaccctggcaccacatatatc
tttggtaaaggagggggtctgatcacatacacgtggcccaataatgagaggccaagcaca
cggacagaccggttggcagtgggcttcagcactaccatcaaagatggcatcctcgtccgc
atcgacagcgccccgcgtctgggtgactacatcatgctccacatcgaacaaggcaaagta
ggtgtgacattcaacattgggacagtggacatcagtgttaaggagacaaccacagcagtg
aacgatggcaaataccatttggtccgattcaccaggaacgggggaaatgccactttgcag
gtggacaactggccagtcaatgagcactttcccacaggccggcagctgacaatcttcaac
acccaggccactatctccatcggtggaaacgaccggaagcgaccctaccagggccagctc
tccggtctctactacaacggcctcaaagtgctcaacatggctgccgagggccatgtcaac
atcaaggtgaacggcagcgtgcggctggtgggcgacgtgccgaccagcagaggcggtgca
cgcaccaccacctcggtaccgccggagatgtccaccaccttcatcgagaccaccaccaca
ctctccaccacgaccactcgcaaacagcgctctccacccactattcagacgacggatgac
attgtttcgtcggcggagtgctccagtgacgacgaggacctggaagagtgcgactccgga
catgcaggaggggagctagtcatccccgtgctagtcgaggaccccatagacatcccttct
gtatccacccgttctcccttcatccccctccccccaaccctccgccccgtcctcaccatt
attgagaccaccaaagaatccttggccatggccactgaggcgggggtaccttgcttgtcg
gaccgaggcagcgatgattgtgatgatggtgatggtggtgatgatggtgatgatgatgat
gatgatggcatggtgatttcggggtttggctctggcgaagctttcgactctagcctgccc
ccgactgacgatgaagatttttacaacaccttctccctggtaacagataagatcttgacc
acatcggcctatgaaggtggctacaaagccctcgcacccaagtgggaggccaaggacttg
aggcctagcaaagcctctgaggcaggtaggactacacccacctcgcctctgcccgacccc
cggggcacgccgccggcggcggtcccctcggacacgccacccaagctgcccgccgggaaa
atgaacaaccgcgaggtaaaacccccgcagccagacatagtcctgctgcctctgcccacg
tccttcgatcaggacggcaccaagccacggggccctttcatcacatcgcccatgctgcgc
acagtgcctgccgccttgcccacagtgcccggggtgcggcgggtgcccccgggggcctca
gaggtgatccgggaatccagcagtaccacgggcatggtggtgggcattgtctcagctgcc
gccctctgcatcctcatcctcctctacgccatgtacaagtacaggaacagggacgagggt
tcctaccaggtggacgagacgcgcaactacatcagcaactcggcgcaaaccaatggcgct
gtggtgaaggataaaacaccgagcggcagcgccaaaggcagtgccggtagcaagagaccg
aaagacaaggacaaggaatattatgtatag
DBGET
integrated database retrieval system
