Larimichthys crocea (large yellow croaker): 104929503
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Entry
104929503 CDS
T04659
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104929503
Membrane trafficking [BR:
lco04131
]
Endocytosis
Others
Others
104929503
Endosome - Lysosome transport
104929503
Endosome - Golgi transport
104929503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
104929503
NCBI-ProteinID:
XP_019134807
LinkDB
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Position
I:33441940..33660274
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AA seq
1237 aa
AA seq
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METWAGFCPGLHLSLGIWLVVAAHTLQNTKAEITCASCPSPVQLHLEVLQLGTRTKATQE
PGTLQNIRVEFRELGFTDQNTGVDDDHETGEDVPQFLQDASLDGVSSKDDAPGSSEESQR
GGDKAGGPDMGEDAALRRARRSGPEFAEFSESGWTGRSGVGAGAPEDRGSLLDGHKQGRS
EFRWNRDEGRGNNRQDEPKLTSSTFALTGDSAHNHAVVYWSGQNSSVILILTKLYDFHIG
SVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPTNKRKIMVLTDPEFESSVLISSD
EGASYQKYRLTFYVLSLLFHPTEEDWALAYSHDQKLYSSVDFGRKWQLIHERVTPNRFYW
SVSGLDKEPDLVHMEAHTPDGNVQYVTCRAQMCTEANRNYPFPGYIDISSLVVQDDYIFI
QVPTSGRATYYVSYKRDSFIQTKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYNLYL
SDTRGVYFTLAMENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYITYNKGRD
WRLLQAPASDLDGNDIHCILPFCSLHLQLQMSENPYLSGTISTKSSAPGIIVATGNIGAE
LSYNNVGMFISSDAGNSWRQIFEEEHNMWFLDKGGALVAVKQPSVPTRHLWVSFDEGRQW
TQHSFSSVPLFVDGVLVEAGTENQIMTFFGHFSHRSEWQLIKIDYKSIYSRNCTEEDYQT
WHLHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERRGD
GNCRPSFWFNPSTVSRSCSQGQNYLNSTGYRKVVLNNCTKGVKEMYTARKQQCPNRPPKG
LLLTTKDGKLTANMGNNVTFLVHLDEGDSMRTNIQLDFGDGTAVSYSNLSWTEEGIKHVY
KSAGIFRVTALAENMLGYDSTTLFLHVTCPVEHVQLLTPFVVIRNKEVNITAVVLPSHSR
TVTYFWWLGNNTEPVITLDGSISYTFPTEGMHTITVQVAAANTILQDTKTIAVKEFFKSL
LLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVSDFPEEQLLVAVFPGVPTAAELFLLPH
KNQSEGRKKSEEELEQVSDVIVSALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSNPRHS
SSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTPKITLS
EFSTSKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttctgcccaggtttgcacttatctctgggtatctggctggtg
gtagccgctcataccctccaaaataccaaggcggagataacttgcgcatcttgcccgtcg
ccagttcaacttcacctggaggtattacagctggggacgcgcactaaagcgacacaggaa
ccgggcaccctacaaaacatccgagtagagtttagggaactcgggtttaccgaccaaaat
actggagtggacgacgaccatgagacaggggaggatgtcccccagttccttcaagatgcc
agtttggatggagttagctcaaaggatgatgcaccagggtccagcgaagaaagtcagcgc
ggcggagataaggcagggggacccgacatgggtgaggatgctgcgctccggagagcgagg
agaagcggtcctgagtttgccgagttcagcgagagcgggtggaccggtcggagcggcgtg
ggtgcgggcgccccggaggatcggggctcgttgttagacggacacaagcagggcaggtcc
gagttcagatggaacagggacgaagggagagggaataaccggcaggatgagcccaagctg
accagcagcactttcgctctgacgggagactctgcgcataaccacgcggtggtctactgg
tcaggacaaaacagcagcgtgatcctgattctaaccaagctgtacgactttcatattggc
agcgtcaccgagagcactctttggagatcaactgactacggctccacatacgagagaatg
aatgacaaagtcggatccaagactgtcctgagttatctgtacgtctgtcccactaacaag
agaaagattatggtgttgacagatccggagtttgagagcagcgtgctcatcagctctgat
gagggagccagttaccagaagtaccggctcactttctacgtgctgagccttctattccac
cccactgaagaggactgggctttagcctacagccacgaccagaagttgtacagctcagtg
gactttggaagaaaatggcagctcatccacgagcgcgtcacgccaaaccgattttactgg
tctgtctcgggcctagacaaggagccagatctggtccacatggaggctcatacaccagat
ggaaatgtgcagtatgtcacatgcagagctcagatgtgcacagaagctaacaggaactac
ccattccctggatacattgacatcagctccttggtggttcaagatgactacatattcata
caggttcccacatcaggacgagccacctattatgtgtcatacaagagagactcgttcata
caaaccaaactgcccaaatattccctgccgaaggatttacacattgtcagcactgatgag
aagcaggtatttgcggcggtgcaggagtggaaccagaacgacacctataacctctacctg
tccgacaccaggggggtctacttcaccttggccatggaaaatgtcaagacaactaggggc
attggaggaaaccagatgctggacttgtacgaggtggcaggaattaaaggcatgttgatc
gctaataaaaggcaagacaaccaggtgaagacgtacatcacctacaacaaaggccgggac
tggcggctcctgcaggctccagcgtcggacctggatggaaacgacattcactgcatactg
cctttctgttcacttcatctccagctgcaaatgtcagagaacccgtatttgtcaggaaca
atctccaccaagagctctgcaccggggataatagtcgccacaggaaacatcggagcagag
ctgtcttacaacaacgttggcatgttcatatcatctgacgccggcaatagctggagacag
atctttgaagaggagcacaatatgtggtttctggacaaaggaggagccctcgtcgccgtc
aaacagccttcagtgccgaccaggcacttatgggtcagctttgacgaggggaggcagtgg
acccagcacagcttctcctccgtgcctctgttcgtggatggagtcttggtggaggctggg
actgaaaaccaaatcatgaccttttttggacacttcagccaccgctctgaatggcagctc
atcaagatagactacaagtccatctatagcaggaactgcacagaagaagactatcaaacc
tggcacctgcacaaccagggtgagccgtgtgtgatgggccaaaaacaaatttacatgaag
cgcaggcctgggaactactgcatgctgggaaaggactactccagaatcctctcagctgag
tcctgcatttgcagagctcatgattttgaatgcgattatggatatgagcggcgtggcgat
gggaactgtcggccttccttctggttcaatccatccaccgtgtccagaagctgcagtcag
ggtcaaaactacctcaacagcacagggtaccgtaaagtggtgttgaacaactgcactaag
ggagttaaagaaatgtacacggccagaaaacagcagtgccccaacagacctccaaaagga
ctcctgctgaccaccaaagatggcaaactcaccgccaacatgggcaacaacgtgaccttt
ctggtgcatctggatgagggtgactctatgcggaccaacatccagctggatttcggtgat
ggcacagccgtatcctactctaacctgagctggaccgaggaagggatcaaacacgtctac
aagtctgcaggaatcttccgtgtgacagcgctggcagaaaacatgttgggttatgattcc
acaacgctcttccttcatgtcacgtgtccagtggagcatgtccagcttctcacccccttc
gtggtcataaggaacaaggaggtgaacatcacagccgtggtcttacccagccactcacgt
actgtcacttacttctggtggctaggcaacaatactgagccggtgataacgctggatggg
agtatctcttacaccttccccactgaaggaatgcacaccatcactgtccaagtggctgca
gccaacaccatactgcaggataccaagaccatagcagttaaagaattcttcaaatctcta
cttttatctttctcccctaatctggacgagttcaaccccgacatccccgagtggagacag
gatgtggggagagtaattaagaaggctctgctccaagtgtctgacttcccagaggagcag
ctcttggtagccgtgttccccggagttccaacagctgccgagctcttcctgttgcctcac
aagaaccaatcagagggcaggaaaaagagcgaggaggagctagagcaggtgtccgatgtg
attgtaagcgcgctgaaccaaaatttggtggagttcgagctcaagcctggtgtaagggtg
atagtgtacaacacacagttgacgctggcacctttggtggactccaaccccagacacagc
agctcagccatgctaatgctcctatcagtggtgttcctaggcctagcagtgttcctcatc
tacaaattcaagagaaaaataccttggatcaacatatacgccgaggtgaaccaggaaaaa
gagcaagagatgatcggttcagtgggccagggcgacagcacgcctaaaatcactctgagt
gagttctccacatccaaagaactcatggagaaggaactggatgccagggtcaaaagggga
gttggaaatgcctgcgagagcacaagggagattccaaactgtactagcgtgtaa
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