Larimichthys crocea (large yellow croaker): 104929600
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Entry
104929600 CDS
T04659
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lco03037
]
104929600 (cfap43)
Cilium and associated proteins [BR:
lco03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
104929600 (cfap43)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_EML
CFAP43_N
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
104929600
NCBI-ProteinID:
XP_010742471
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Position
III:18345396..18361231
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AA seq
1655 aa
AA seq
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MDDTGSLEVRWVQSFTNKTIAFVDNKTVCYTCGSHICFLNLETKMQSVLQSPGRGTGALT
ASGNNRIFAFSEQKLSPSIFVYTYPECQLKNELKGTAQLDYTSLTLSDDGPYLGCCSSLP
DFTITVWNWENAEPLCTQPQVGRDVISLVFNPLNWLQLCALGSTSLTVWNIEKSANFHIM
KPSVIELPATDGSFVMPISHAFTNKMSSFGPEMPLSAISGLKGDKAESILTKLCTKARLT
PTAICWTATSELYVGCEEGFLLLVDTESLSVSVIFNPTAPDAIPELRQTSFQGLTLNMVN
GLVAVGKENVVHCLQIKGTQIDITQKWHLERPVTTVMYSPNYETLLLSSDTGQIYMLNAT
QSDEIVKVLDVLSGNFVAAVLSHTDKKNCVSVRDSGELQLWSPEGICLGSLSLQTEVTSL
ACCLVAQYAAVGTASGNVLFIDLNKEQQPRLVHQVHLYHTPVDQLVFDQEGHYLLTSSSD
SHIYVLDAKPSKRFSVIGYTVLPGLILSISTQCIRDCGQVKALALCTKQEGKNQDGSLLT
VLSLPVKDLADPDCVDRYGCLSTSILQVSRYEVPDPLNACVLGVGEVFAYCHKRKTLQRF
QLPQDTDTSQLVVQLKPEQEVKGHPLGPASLALSPHHLWLASVGRDGLLRIRETASMEWY
IELQCHSHRVGGVRAVSFSADSQTLLTTGCDDGSLVCANLRIKGEDAGKVNEATQYSRSM
DYFLKNKFKTENRVLIDLPEWGRECPAATKNPEESEASVGAEMTVDVTEQDECYNSQLSA
PPSHPTWLESRREAVIKEDNENYSDIKEILRREFQESRDTIQEMINENETLPENERLELW
EFNLDVEEQKRLDAMVQEEVTRVRNEIEMEILEKKYLCDVLKREYWDSMKVKGRAVRAFH
SEHEVKNYPMKERTGREEEELRMVENMRKLENAACAQSSLKTNPNTTVVKEEKHAEEGNE
AESAGVTGSLSDQLGCSNPYLYNQFSLHTTEQRINQIILLQDVIYRVKTAFNADFDAAYR
LKLQELNRVRERNRQITGIMLDLDINEKLWEPSLTNSEQPERMFTVDDSEIKAEKYLTPE
QKEEEEKKKLEEQRCLAAKGENLRDRALDSMMNGVLEVKKEDILKMEIPPPEFVLTKPDI
QWSEEEKKEYKIYENKTKSLAVEKDKYKKSLETEMRKLQKTNEEATKKFDETLIKLFEKK
IKSEMAIYQEEFKITYLVYSVLVEEEMRNQELELKRKLEKTVAHKDEIGQEVKRLDEELE
LFQEIYDSAVAEDKVFDKEFRKEFYDVPNNLINQLYKLFKRRPRIQKIRAQTDNSNLFKE
KHLCASLAPDAFGEMLKAMEELDAPENMPEGLNPSIWERFCLARRAKAESEQKVKVKALT
LAEMQAFLQKRRDEEKDAQLEIKNLSEELESLHKEKNDFLTNIMVQVLLKQGQVEVSTTD
LTADYSDSVLLHRSLVEDLNRNIRTLGEEKIASMDKCKNARKGIIQLEWEHKMRRMQIED
LNNKAKDIQMLQLSEVQRDYLNMTDRDTRDSKELSTLEKTIAFKEKTHELNVQKRQKKIK
QLNKQAAKITEKNATLEQHLPDLQVDVAMRTHIYEATVSEEGPADKGEKRYQEIVQRRKL
EDLAKAQAEDLALLMREVERLRRRNFPSLDQLKHK
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggatgacactggaagtttagaagtcaggtgggttcagagtttcacaaacaagactatc
gcgtttgtcgacaataaaacagtatgttacacgtgtgggagtcacatctgtttcctgaac
ctggagacgaaaatgcaaagtgtgcttcagagtcctggcagaggcactggtgcgttgaca
gccagcggcaacaataggatttttgctttctctgagcaaaagctatccccatctatattt
gtgtacacttaccccgagtgtcagttaaagaatgaactaaaaggaacagcacaactggac
tacacatctctgacattaagtgacgatggtccttatttgggctgttgttcctctcttcca
gacttcaccataacagtgtggaactgggaaaatgctgagccactttgtacgcaaccacaa
gttgggcgtgatgtcatttccttggtgtttaaccctctgaactggctccagctttgtgct
ttgggctctacctccctcactgtctggaatattgagaagagtgccaactttcatatcatg
aaaccaagtgtgatagagcttccggcgacggatggttcctttgtgatgcctatctctcat
gctttcaccaacaaaatgtccagttttggtccagagatgcctctgtcagccatctcaggc
ctcaagggagacaaggcagaaagcattctgactaaactctgcaccaaagccagattgact
cctactgccatctgctggacagccacatcagagctctatgtgggctgtgaagaaggcttt
ctgcttcttgttgacacagagagcctctctgtctcagtcatcttcaaccccacagctccc
gatgccatccctgaactcagacagaccagctttcaaggtttaaccctgaacatggtgaat
ggtttggtcgctgtaggaaaggagaatgtggtacactgtctgcaaatcaaagggactcag
attgacatcacacaaaaatggcatttagaaagacccgtcacaacagtgatgtactccccc
aactatgaaactttacttttatcttctgatacagggcaaatctatatgttgaacgcaacc
cagtcagatgagattgtgaaggtcttggatgttctcagtggcaactttgtggcagcagtt
ttgtcacacactgacaagaaaaattgtgtgtcagtgagggattctggagaactgcagctg
tggtctccagaaggcatttgcctcggctctctgtctcttcaaactgaggtgacaagtctg
gcctgctgtcttgttgcacaatacgcagctgttggaacagcttcaggaaatgtcctcttc
attgacctgaacaaagagcagcagcctcgcctggtccaccaggttcatctctaccacact
cctgtggatcaactagtttttgatcaagaggggcactaccttctcaccagttcctcagat
tcacatatctatgtactagatgcaaagccatcaaagaggttttcagtcataggatataca
gttcttcctggactcattctgtcgatttccactcagtgcatcagagactgtgggcaggtg
aaagctcttgcactgtgcaccaaacaggagggcaaaaatcaagatggtagcctcctcaca
gtgctctctctgcctgtgaaggaccttgcagatccagattgtgtagaccgatatggctgc
ctgtctactagcatcctccaagtgtctagatacgaagtgcctgatccacttaatgcctgt
gttctgggagtcggtgaggtctttgcttattgccacaagaggaaaacccttcagcgattt
cagcttcctcaggacacagacaccagtcagctggtggtccaactgaaaccagagcaggaa
gtgaagggtcatcctctgggccctgcctctctcgctctgtctcctcaccacttatggcta
gcctctgtgggccgagatggcctattacgcatccgagaaactgcttccatggagtggtac
attgagctgcaatgtcattcacaccgtgttggtggagttcgggctgtgtccttctctgca
gacagccagacactcctcactactggctgtgacgatggctctcttgtgtgcgctaatctc
agaattaaaggtgaagatgctggtaaggtgaatgaagctactcagtatagccggtctatg
gattatttcttgaagaacaaattcaagacagaaaatcgcgtcctcattgacttgcctgag
tggggccgagagtgtcctgctgccactaaaaacccagaggaaagtgaggccagcgttgga
gcagagatgactgtggatgtgacagagcaggatgagtgttataacagccaactgtctgct
ccaccttcacaccccacctggctggaaagcaggcgagaggcggttataaaagaagacaat
gaaaattattcggatataaaggaaatcctgagaagagagttccaagagtcacgtgacact
atccaggagatgataaatgaaaatgagacgctcccagaaaacgagcgtcttgaactatgg
gagttcaacctggacgttgaggagcagaagagactggacgccatggtgcaggaggaagtt
accagggtgagaaatgaaatcgaaatggagattttagagaaaaaatacctctgtgatgtc
ctgaagagagagtactgggattctatgaaggtcaaaggcagggctgtgagggcctttcac
tctgaacatgaagtgaaaaactacccaatgaaagagcgaacagggagagaggaggaagag
cttcgcatggttgagaacatgaggaagcttgaaaatgctgcttgtgctcagagcagccta
aagacaaatcccaacacaaccgttgtgaaggaagaaaagcatgcagaggaaggtaacgag
gcagagagtgctggtgtgacgggaagtctctccgatcagttgggctgttcaaatccttac
ctctacaatcagttcagtctgcataccacagaacaaaggatcaaccagataattctgctg
caggatgtgatttatcgcgtcaagacagctttcaacgctgactttgacgccgcgtacagg
ctgaagctgcaggagctcaaccgtgtgagggagaggaacagacaaatcacagggatcatg
ctggatctggacataaacgagaagctgtgggagcccagcctgaccaacagcgagcagcca
gagaggatgttcaccgtggacgactctgagattaaagcagaaaagtacctcacaccagaa
cagaaagaggaggaggagaagaagaagttggaagagcagcggtgtttggctgccaagggt
gaaaacctcagagacagggctcttgattcgatgatgaatggagtgcttgaagtgaaaaaa
gaggacatcttgaaaatggaaatacctccgcctgagtttgttttgaccaaacctgacatc
cagtggagcgaggaggagaaaaaagaatataaaatctatgaaaataaaaccaaaagtctg
gctgtggagaaggataaatacaaaaagtcactggaaacagaaatgagaaaactgcagaaa
accaatgaagaagcaaccaaaaagtttgatgaaactttgataaaactgtttgagaagaaa
attaaatctgaaatggcaatatatcaggaagagttcaagattacttatcttgtctactca
gtccttgtcgaggaggagatgagaaatcaagagctggagctcaagcgcaaacttgaaaaa
acagtggcacacaaggatgagattgggcaggaggtgaagagacttgatgaagaattagaa
ttgtttcaagagatctatgacagcgctgtagctgaggataaagtttttgataaagaattc
aggaaggagttctatgatgtaccaaacaatctgattaatcaactatacaagttattcaag
cgcagacccaggattcaaaagataagggctcagaccgacaactccaacctgtttaaagag
aagcatctgtgcgcctctctggctcctgatgcgttcggcgaaatgctgaaggccatggag
gagctggatgctccagagaatatgccagaaggcttgaacccatcgatctgggagaggttt
tgtcttgcccgcagagcaaaagcagagagtgagcaaaaggtaaaagtaaaagctttgact
ctggctgagatgcaggcgttcctgcagaagaggagagatgaggaaaaagacgctcaactg
gaaatcaaaaatctctctgaagaacttgagagtctgcataaggaaaagaacgacttcctg
acgaacatcatggtccaggtcctgctcaaacagggccaggtggaggtgtctaccacagac
ctgactgctgactacagcgactctgtacttctccacaggagtttggtggaggacctcaac
agaaacatcaggacacttggagaggagaagatagcctccatggataaatgtaaaaacgct
cgtaagggcatcatccagctggagtgggagcacaagatgaggaggatgcagatagaagat
ctcaacaacaaggcaaaggacatccagatgttacagctctctgaggtgcaacgggattat
ctcaacatgacagatcgagacacacgtgactccaaggagctttccactttggagaaaact
attgctttcaaggaaaagactcatgaactgaatgtgcagaaacgccaaaagaagattaaa
cagctgaacaagcaggcggcgaagataaccgagaagaacgctacattagaacagcaccta
cctgatttgcaggtggatgtggcaatgaggacgcacatctacgaagccactgtttcagaa
gaaggtcccgcagataaaggtgagaagcgctaccaggaaatcgttcagaggaggaaattg
gaggacttagccaaagcacaggcggaagatctggctttgctcatgagagaagtggaacgt
ctgaggaggaggaacttcccttcacttgatcagctgaaacacaaatga
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