KEGG   Larimichthys crocea (large yellow croaker): 104929623
Entry
104929623         CDS       T04659                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lco03036]
    104929623 (wdhd1)
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    104929623 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid WD40_Prp19 Beta-prop_THOC3 Ctf4_C Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 HMG_WDHD1 WD40_CDC20-Fz Beta-prop_Aladin Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_IFT140_1st Beta-prop_HPS5 EIF3I WD40_MABP1-WDR62_2nd HMG_box Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N eIF2A WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Nup120_160 NBCH_WD40
Other DBs
NCBI-GeneID: 104929623
NCBI-ProteinID: XP_019113543
LinkDB
Position
VIII:30377778..30389313
AA seq 1131 aa
MPCERKPMRYDHSEGHTEVCYDDSGRFIVTCGNDGDVRIWESLDDDDPKFITVGEKAFSL
ALKNGKLVTASSNNTVQIHTFPDGDPDGILTRFTTNATHVTFNSSGSRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVTFDPKDDFLASASCDGSVVVWNVDEQTQVISWPLLQKT
NDVSNAKSLCRLAWQPKTGKFLAVPVETKVHLYERGTWDHVSTLSDDLLTQPINVVAWSP
CGRFLAAGSVGGALNVWDASSKLCVERQKHEKGFTVCGLAWHPSGSQIAYTDTEGCLGLL
DGLSTSTSTTSTSTTKQVAEKKPANDFDDLFDDDDDRLMDEGLSDTNSPAKKPAAVDDDD
DDDFLVPATGRVRNRAILDDENSLDTGSLKLGRDKFGEDDDDAGSAVMPAAAAPLVPLRP
VYDGPMPTPPQKAFQPGSTPAHLTHRFMMWNSVGIVRGYNDEQDNAIDVEFHDTAVHHAM
HLTNSLGHTMADLSQEAVLLACPSTDELASKLQCLHFSSWDTNKEWMVDLPKDEDARALC
LGQGWAAVATSALMLRLFSIGGVQREIFSLPGPVVCMVGHGEQLLIVYHRATGFDGEQAL
GVQLLQFGRRKRQLINGEPLPLSRRSYLSWLGFTAEGTPCYVDSEGVIRMLNRSLGNTWT
PVCNTRETCKSKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTA
TEKGQMEEQFCRSVLFHNHYSFLSSSGYEINEDGRSQSQKEQQELLMKMFALSCKLEREF
RCVELAELMTQNVVTLAIRYASRSRRMALAQRLSEIALEKANQMQEEEEEEEEEEPEYSR
RTSGYGQSGRHGNRRNQEEEEEQGEELREEEDGGQEMETEEPAETRRRVNPFAKEAGSPV
TPSVTPTAKVGRANPFKVLGSGKPSSSSGQPRVTNILDNMTSSRKSSPLSGAAGKQSKGP
VLKPLAPRPKTKTQSTLLQMTGTKASNKKTPENAEPAADRQKQPDVPPPSAPAENTENKR
PKTGFQLWLDENRKNITADHPDLEETDVIKEAMGRFRTLSADERLSWTERAKGQTGDDAT
DLKKRKRGGAGGGGGGGEEEDGRTDADENSAKKKKSLDPSSKLSAFAFNKS
NT seq 3396 nt   +upstreamnt  +downstreamnt
atgccgtgtgagaggaagccgatgcgctacgaccactcggagggacacaccgaggtctgc
tacgacgactccgggaggttcattgtgacctgcgggaacgacggcgatgttcggatatgg
gagagtctggatgacgacgacccgaagttcatcacggtcggggagaaggcgttctccctg
gcgctgaagaacggcaagctggtgacggcgagctccaacaacacagtgcagatccacacg
tttcccgacggagacccggacggcatcctgacccggttcactaccaacgccacgcacgtc
accttcaacagcagcggatccagggtggctgctggatccagtgacttcatggtgaaggtg
gtggaggtgtcggacagcagccaacagaaaacactccggggccacgaagcgccggtcctc
agcgtgaccttcgaccccaaagatgacttcttggcgtctgccagctgtgacggctccgtc
gtggtgtggaacgtggacgagcagactcaggtgatcagctggcctctgctgcagaagacc
aacgacgtcagcaacgcaaagtctctgtgtcggctggcctggcagcccaagacgggaaag
tttttagcggttcccgtagagacaaaggttcacctgtacgagcgagggacctgggatcac
gtgagcactctgtctgatgatctgctgacacagcccatcaacgtggtggcctggtctccg
tgtgggcgcttcctggcagccggcagcgtgggaggagcgctgaacgtttgggacgcgagc
agcaagctgtgtgtggaaagacagaagcacgagaaaggcttcacggtgtgcggtctggcc
tggcatccgtcaggcagccagatcgcctacacggacacggagggctgcctgggccttctg
gacggactcagcacctccacctccaccacctccacctccaccaccaagcaggtggcagaa
aagaagccggcgaacgactttgacgacctgttcgatgatgacgatgatcgactcatggac
gaaggactcagcgacaccaactcaccggctaagaaacccgccgccgtggacgacgatgac
gacgacgacttcctcgtgccggcgacggggcgcgtgaggaaccgagcaatcctggatgac
gagaactcgctcgacaccggctcgctgaagctcgggcgggacaaattcggggaggatgac
gatgacgcgggcagcgccgtcatgcctgcagccgccgccccgctggtgcccttacgcccc
gtctatgacggaccgatgccgacgcctccccagaaggcctttcagccgggctccacgccg
gcacacctcacgcaccgcttcatgatgtggaactctgtgggaatcgtgcgaggctacaac
gacgagcaggacaacgccatcgacgtggagttccacgacacggccgtgcaccacgccatg
cacctcaccaactctctgggtcacaccatggctgatctttcccaggaggccgtgctgctg
gcctgccccagcacggacgagctcgccagtaagctgcagtgcctccacttctcgtcctgg
gacaccaacaaggagtggatggtggacctcccgaaggacgaggacgccagggcgctgtgt
ctgggtcagggctgggcggcggtcgccaccagcgcgctgatgctccgactcttctccatc
ggtggagtccagagggaaatcttcagcctgccgggtcccgtcgtgtgcatggtcggacac
ggagagcagctgctcatcgtctaccatcgagcgacgggtttcgacggcgagcaggcgctc
ggcgttcagctgctgcagttcggtcgaaggaagaggcagctcatcaacggcgagccgctc
ccgctgtctcgcagatcctacctgtcctggctcggattcaccgccgagggcactccgtgc
tacgtggactcggagggtgtgatccgcatgctgaaccgctccctgggcaacacgtggacg
ccggtgtgtaacacgagagagacctgcaagagtaaatcagatcactactgggtggtcggc
gtacacgagaaccctcagcagctcaggtgtattccctgtaaaggctccaggtatcctccc
accctgcccagacctgctgtggccatcctgcccttcaagctgcctctgtgtcagaccgcc
acagagaaaggacagatggaggagcagttctgccgctcggtcctcttccacaaccactac
agcttcctgtcgtccagcggctacgagatcaacgaggacgggcggagtcagtcgcagaag
gagcagcaggagctgctgatgaagatgtttgcactgtcctgtaagctggagagagagttt
cgctgcgtggagctggccgagctcatgactcagaacgtggtgactctggccatccgatac
gcgtcccggtccaggcgcatggcgctcgcccagcgcctcagcgagatcgctctggagaaa
gccaaccagatgcaggaagaggaggaggaggaggaggaagaggagccggagtactccaga
cggacatctgggtacggccagagtggacgtcacggcaaccggcgaaatcaggaggaggaa
gaggagcaaggagaggaactcagggaggaagaggacggaggacaggagatggagacggag
gaaccggcagaaaccagaagacgtgtcaatccgtttgctaaagaggcgggttcacctgtg
acgccgtctgtgacgccgactgctaaagtcgggcgtgcgaatcctttcaaggtgctgggc
tcggggaaaccctcgtcttcgtccggtcagccccgagtgacgaacatcctggacaacatg
acgtccagcaggaagtccagtccgctcagcggagctgcagggaaacaaagcaaaggcccc
gtcctcaaaccgctggctcccaggcccaagaccaagactcagtccactctgctgcagatg
accggcactaaggcgtccaataagaagactccagagaacgccgagccggctgcagatcgg
cagaagcaaccagacgtcccgcctccgagcgcgcccgcagagaacacggagaataagagg
ccgaagacgggcttccagctgtggctggacgagaacaggaagaacatcacggctgatcac
cccgacctggaggagacggacgtcatcaaagaggccatgggacgcttcaggacgctgtca
gcggacgagcggctgtcgtggacggaaagagccaaagggcaaaccggagacgatgccacg
gatctgaagaagaggaaaagaggaggagcaggaggaggaggaggaggaggagaggaggaa
gacggacggacagacgctgatgaaaacagtgccaagaagaagaaatctttggatccttcc
tcgaagctttctgcgtttgcgtttaacaaaagctga

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