Larimichthys crocea (large yellow croaker): 104929640
Help
Entry
104929640 CDS
T04659
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104929640
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lco03310
]
104929640
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104929640
Nuclear receptors [BR:
lco03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
104929640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104929640
NCBI-ProteinID:
XP_010742514
LinkDB
All DBs
Position
XII:complement(16195779..16210756)
Genome browser
AA seq
508 aa
AA seq
DB search
MLSFVLTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLID
RTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECAGSGGGGST
ALSLPKEDGVCGSGREDCEEGLSRSYSTGGSSSTLSDLDDIAALPDLFDLPLTPEEASEY
CSLELLGGGASTGNTSNSSSSSSSSSSLSNQNSPQQTMLDGADGNGIQLLHTHSHTHALL
EHTHALLDHLPDDCSITDLERITQSIVKSHLETCQYSAEDMKRFTWAQYTPEETRAFQNK
SAEWMWQQCAHHITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNV
NNSTIFFNGKFAPAQFFKALGCDDLVSAVFDLGKGLCRLQLSDEEMALFSAAVLLSPDRT
WLTEGQKVQKLQEKVYLALQHSLHKSGASDEKLDKMVSKLPIMKSICNLHIDKLEFFRLI
HPETAYSFPPLYREVFGSEMSLPDSTDS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcttttgtccttacagctcagatcgaggtcatcccctgtaagatctgtggggac
aagtcctcaggaatccactatggagtcatcacctgcgaaggctgcaagggtttcttccgt
cgcagtcagcagaacaatgccatgtactcttgttcccgccagaggaactgcctgatcgac
cgaactaaccgtaaccgctgccagcactgccgtctacagaagtgtctggctttgggcatg
agtagagatgcggttaagttcggtcgtatgtctaagaaacagcgtgacagcctctacgct
gaggtgcagaaacaccaaaagtcccaggagtgtgcgggctctggaggcgggggctctaca
gctctgtccttgcccaaggaggacggtgtctgtggcagtggcagggaggactgtgaagag
ggtctgagtcggtcctatagcaccggggggtccagctccactctcagcgacctggatgac
attgcggcactgcctgacctatttgacctcccgctgacccctgaggaggcgagcgagtac
tgcagcctggagctgctcggcggaggggccagcaccgggaacacctccaactcatcgtcc
tcttcttcctcttcctcatccttgtccaatcagaattccccacagcagacgatgctggac
ggcgcagacggcaatgggatccagctcctgcatacacactctcacacacatgcgctgctg
gaacacacacatgcactgctggaccatctgcctgatgactgctcaataacagacctcgag
cgcatcactcagagtattgttaagtctcacttggagacgtgtcagtacagcgctgaagac
atgaagagattcacctgggcacaatacacaccggaggaaacgcgtgcttttcaaaacaag
tcagctgagtggatgtggcagcagtgcgcacaccacatcaccaatgccattcagtatgtg
gtggagtttgccaaacgcattgcaggcttcatggacctctgccagaatgatcagattata
ttgctgaaagcaggctgtctggaagtcctgctgatacgtatgtgccgagctttcaacgtc
aacaacagcaccattttcttcaatgggaaatttgccccggcacagttcttcaaagcactt
ggttgtgatgacctagtaagtgctgtgtttgacctcggaaaaggactctgtcgtctacag
ctgtctgatgaagagatggctctgtttagtgctgccgtccttctatctcctgatcggacc
tggctaacagaaggccaaaaggttcagaaactccaggagaaagtctacctggctctgcag
cacagtctacataagagtggtgcttctgacgagaaactggacaagatggtgtccaagctg
cccataatgaagtctatctgtaacctccacatcgataaacttgagtttttccgtttgatc
cacccagagaccgcatacagtttcccaccactataccgggaagtgtttggcagcgagatg
tccctgccggactccaccgacagttag
DBGET
integrated database retrieval system
