KEGG   Larimichthys crocea (large yellow croaker): 104929649
Entry
104929649         CDS       T04659                                 
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104929649
   04121 Ubiquitin system [BR:lco04121]
    104929649
Enzymes [BR:lco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104929649
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104929649
Ubiquitin system [BR:lco04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104929649
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_BICC1_1st zf-C3HC4 KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Prok-RING_4 zf-RING_5 CR_prot_dom_plant
Other DBs
NCBI-GeneID: 104929649
NCBI-ProteinID: XP_010742526
LinkDB
Position
XII:16050502..16059654
AA seq 657 aa
MPSPLFHPEIMDHDVVISSQHSGVGMPRETDQESREEDHQEALRFALDQLSLMALDKVDC
GGGGGSGGSGGVDTLDGSQGPGSEGCNGVGGGGYVDLQMLEHPNGSRDSPTSCSPSPEYY
GSGGYHMAGSHSMLHGEQSSVLCSRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAK
TNTYIKTPVRGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGAPGGGGGGSL
PGPPHLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMP
ENVDRAREEIETHITLRTGTFVDLQGDNDFHSNGTDVSLEGLGALAGGLGASLWSRATGH
HSAPPPPPPSPPPPIPMSMHHSSGRKMSSSVAYHTHNGGMSSDSFNATRKANEGGSPTSP
FSTGSSSAGGGFTFGGDSTPGLPSSEELGFEFSASNIWAPFVNGGTGNKTAGSSQQQQPL
RRNSSGLSGGAITPRLSPTLPQDTGVGPLDHPLARRAQSDPLSTLSWLQSGSTGGGSFSG
ASSSSSGGSSTGYSSCSASSLPGGSPTDSEGGSSGVGLSSGMLSRLKGGPGVAGLVGVSP
GINRDCFVCFESEVTAALVPCGHNLFCMECAGQICQSAEPECPVCHTPTTQCIRIFS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgcctagccctttattccaccccgagattatggaccacgacgtggtgatcagcagccag
cacagcggggtcggtatgccccgtgagacggaccaggagtcccgggaagaggaccaccaa
gaggcgctacgcttcgccttggaccagctgtcactcatggccctggataaggtggactgt
gggggcggcggtggtagcggcggcagcggcggcgtcgacaccctcgatgggtcccagggt
cccggctctgagggctgcaacggcgtgggcggagggggctacgtggatctacagatgctg
gagcatcccaacgggtcccgagactcgccgacttcctgctctccatccccggagtactac
ggctcgggcgggtaccacatggccggctcacactccatgctccacggggaacaaagctcc
gtcctctgcagcaggaaaagaagtgtcaacatgactgagtgtgtgcctgtgcccagctct
gaacatgtggctgaaatagtgggcagacaaggttgtaagatcaaggccttgcgtgccaaa
acgaatacttacataaagactcctgtccgaggcgaggagccggtgttcatcgtgacggga
cgcagggaggacgtggagatggccaaacgcgagatcgtctctgcagccgagcacttctct
atgatccgggcatcccgctgcaaagccggagcaccaggtggagggggaggaggctctcta
cccggaccgccacacttacctggacagaccaccatacaggtgagggtgccctacagagta
gtcggtttagtagttggaccaaagggagcaactatcaagcgcatccagcagcagactcac
acctacatcgtgacgcccagtcgagagaaagacccggtgtttgaggtgaccggcatgccg
gagaacgtggaccgagcgagggaggagatcgagacccacatcaccctgcgaactggaacc
tttgtagacctgcagggagacaatgacttccactccaatggcactgatgtcagtctagaa
ggcttgggcgccctggccggaggtttgggggcgtctctgtggtccagggccactggccac
cattctgccccccctcctcctccgccctccccacctcctcccattcccatgtccatgcac
cactcctccggccggaagatgtcctcgtcagtcgcctaccacacgcacaacggcgggatg
agctcagacagcttcaacgccactcgcaaagccaacgagggaggcagccccactagccct
tttagcacaggctccagcagtgctggaggaggattcactttcggtggtgactccaccccc
gggctgccctcctcagaggaactgggctttgagttcagcgcttccaacatctgggcacct
tttgtcaacggtggaacaggcaacaagacggccgggtcctcccagcagcaacagcctctt
cgtcgcaacagcagcggcctcagcggtggagccatcactccaagattgtctccaactctg
cctcaggacacaggcgtgggcccactggatcatccactagcccgtcgtgcccagagcgac
cccctcagcactctctcctggctacagtccggcagcaccggaggtggctccttctcagga
gcgtccagctcgagctccggcgggtcgtcgaccggttactcctcctgctcggcctcctcc
ctgcccggtggttcacccactgactccgagggaggcagcagcggcgtgggcctcagctcc
gggatgctgagccgactgaaaggcggccccggcgtcgccggcctggtgggcgtcagcccc
gggatcaacagggactgctttgtgtgtttcgagagcgaggtgaccgcagccctggtgcct
tgcggccacaacctgttctgcatggagtgcgccgggcaaatctgccagtcagccgagcct
gagtgccccgtctgccacactcccaccacacagtgcatccgcatcttctcttaa

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