Larimichthys crocea (large yellow croaker): 104929653
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Entry
104929653 CDS
T04659
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104929653
Membrane trafficking [BR:
lco04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
104929653
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
LRR_EndoS
ig
Ig_2
LRRNT
LRR_6
LRR_LRWD1
LRR_9
V-set
Motif
Other DBs
NCBI-GeneID:
104929653
NCBI-ProteinID:
XP_010742534
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Position
XII:15932081..15966125
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AA seq
622 aa
AA seq
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MIDSPGPGGRALVPWPRVWRWVLGASLVAIITMTLPGSSQACPPRCECSAQLRSVSCQRR
RLTNIPEGIPTETQLLDLSKNRLRWVQAGDLAPYPRLEEVDLSENLIATLEPNAFATLQS
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDLRSLKHLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLRSLVTLRLHHLSIIALEDQNFRKLSN
LRGLDIDHWPYLEYISPLSFQGLDLHWLSITNTNITSVPSASFKNLVHLTHLNLSYNPIT
TLEPWAFKDLLRLKELIMVSTGLMTVELHALGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLMCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSAFTDSALFDHFT
CQKPKIRNRKMQQVIAREGQPVSFLCRAEGEPVPAIVWISPQRRRITAKSSGRITVLPSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRGQPLDAASAFFLNRSLYSGDFFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSF
RKSEPATGGSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattgactctcctggccctggtgggcgtgccttagtgccatggccgagggtgtggcga
tgggtcctgggtgcttctctggttgccataataacaatgacgctaccaggaagtagccag
gcctgtccgccacggtgcgagtgctcggctcagctgaggtcagtgtcgtgccaacggcgg
cggctcactaatatcccagagggcatccccacagagacacagcttctggacctcagcaag
aaccggcttcgctgggtgcaagcaggtgacctggcaccatatccacggcttgaggaagtg
gacctcagtgagaacctcatcgccacactggagcccaatgccttcgccaccctccagagt
cttaaagtgctgaagttacgggggaaccagctgaagctagtgcccatgggggcctttgcc
aagctggggaatctgaccagcctggacctgagtgagaacaagatggtgattttattggac
tacaccttccaggatctgaggagtctgaaacatttggaggttggagacaacgacctggtt
tatatatcccacaaggcattctcagggctgctgggacttgaagatctcacaatagagcgc
tgcaacctgacgtccatctctggccagacgctgtcttaccttcgcagcctggtcaccctt
cgcctccatcaccttagcatcattgccctggaggaccaaaacttccgcaagctctccaat
ctgcggggtctagacatcgatcactggccatacctggagtacatctcccctcttagtttc
cagggcctggacctccactggctttcaatcactaacaccaacatcacctctgtcccttct
gcttccttcaagaatctggtgcacctcacccacctcaacctgtcctacaatcccatcacc
acacttgagccctgggccttcaaggacctgctgaggctgaaggagctcatcatggtaagc
acagggttgatgacagtggagctccatgcccttggaggcctccgacagatccgggtcctc
aacttctcctccaatgacctgcagactttggaagagggctccttccactctgtcaacagt
ctggagaccctcagagtggatgggaaccccctgatgtgtgactgccgtctgttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccggtgtgtgcggggccggtg
gaggtgcaaggggtcagcctcagcgccttcaccgattctgcactcttcgatcactttaca
tgccagaaacctaagatacgcaaccgtaagatgcagcaggtgattgctcgcgagggccag
ccagtgagttttctgtgtcgagctgaaggagaaccagtacctgctattgtctggatttcc
ccacagcgcagacggatcacagctaagagttcagggcgcattactgttctcccgagtggc
accctggagatccgctacgctcagcttaccgacagcgggacgtacatctgcatcgccagt
aacgccggaggcaatgacacctacttcgccacactcacagtgcgaggccagccactagat
gccgcctcagccttctttctcaaccgctcgctgtacagtggcgacttcttcaacgacaca
aatctgaacagcacacgtgtttttctcaagttcaccttggacctgaccacaatcttggtc
tccacagcaatgggttgcatcacctttctgggagtggtcctcttctgtttcctgctgttg
ttcgtgtggagccgaggacgcggccaacgcaagaacaacttcacagtggagtactctttc
cggaaatctgagccagccactggaggctcctcgggagggaccaggaagttcaacatgaaa
atgatatga
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