Larimichthys crocea (large yellow croaker): 104929674
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Entry
104929674 CDS
T04659
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104929674
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
104929674
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
104929674
NCBI-ProteinID:
XP_019117849
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Position
XII:15809596..15841313
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AA seq
1165 aa
AA seq
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MLNVMDRNEVSPVSAATMKKQAVGGSGCSHISAPKAAATKCTRRNSNQNCLDTGSPGAPS
GKQAGAASNVVMDETEDGDEECKFQHPRLRRSGGSGSGGGGGGGGSIRMKNFTPGGGAAS
SGSRRNSSKEPYHTHTEDAPAAPRPTAVSRATETQTPCPGDAAQRGETNRASGAEASESA
VAVELSNATAGDGCKSVAPISSMKCNKNGECRRDSGTGSLRSIISKQEKQTGGSGRAEDG
GSAKRGACNSTTASMDGSITPGGSLTGGHGGESANPGTTPVSSGVPEKKDSKVSFSNAPS
RKASSSLHGPTQTQQPRNSVTFQKPEDGPQIVPAEDAEPQGSQASFMQRQFSSMLQPGVN
KFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFF
KEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFIVDFI
SSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM
TYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQEFPSDCWVSLNKMENDTWSELYSF
AVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQY
QEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVNFNCR
KLVASMPLFANAEPNFVTAMLTKLRFEVFQPHDYIIREGTIGKKMYFIQHGVCSVITKGT
LAMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAFETVA
IDRLDRIGKKNSILMHKVQHDLNSGVFNNQENEMIQEIVKYDREMVKLVDLQRPRAMSMT
PSIGGIFAPPGQPQSGSAIATLQQAVAMSFCPQMASPLVGPGTLQSPRMVRRFQVMQNLS
SPVSMSPLQSQPPQAFGGAFGSAISSPPVQSPLAASGRTFQYLASAGPSGSQLSLVQHHA
PSPTQTQQRPASHKSTHSLHTGSLSQDTRALSASQPSLPQEGTPQAASAAPSPPPSTRTS
NNSIGPPQPSHPSLPGPSGVGRSTGAQQRVAFASTPPPGGPAGMGAVAAAAAAGSGPPDS
GVPKKDSIVSLPELDSARSRLSSNL
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgtcatggacaggaatgaggtttcaccggtgtctgctgccacaatgaaaaag
caggcggtgggcggcagtggatgcagccacatcagtgctcccaaggctgcagcgaccaaa
tgcacaagacgcaacagcaaccagaactgtctggacaccggttctcccggcgcaccgagt
ggtaagcaggccggtgcggccagcaacgtcgtgatggacgagacggaggacggagatgag
gagtgcaagttccagcatccgcggttgcgccgatccggggggagcggcagtggcggaggt
ggaggaggaggcggcagtatcaggatgaagaactttacgccaggagggggagccgcgtcc
tcgggttctaggagaaactccagcaaggagccctatcacacgcacacggaggacgctccc
gccgctccacggcccactgctgtctccagagctaccgagacccagacaccctgtccgggc
gatgctgcccagcgcggcgagaccaacagagcatctggggcggaggcgtcggaatcagcg
gtcgcggtagagctttcaaacgcgacagcgggtgatggttgcaaaagcgtcgctccaatt
tccagcatgaaatgcaacaaaaacggagaatgcaggagggactcgggcaccgggagcctg
cgctcaatcatctccaagcaggagaagcagacaggagggtcggggagggccgaggacgga
gggagcgccaagcgaggagcctgtaactcgaccacggccagcatggacggctcgatcaca
ccaggcgggtccctgaccggggggcacggaggagagagcgcaaaccccggcactactccc
gtatccagcggcgtccccgagaaaaaggactccaaggtgtccttctctaacgcgccaagc
cggaaagcctcgtcctcgctgcacggcccgactcagacccagcagcccaggaactctgtc
actttccagaagccggaggatggaccgcaaattgtgcccgccgaggatgcggagcctcag
ggcagccaagccagcttcatgcagcggcagtttagtagtatgctgcagcctggagttaac
aaattctccttacgcatgtatggtagtcaaaaagcagtggagagagagcaggagagggta
aaatcagctggaaattggattatccacccttacagcgatttcaggttctactgggatttc
acaatgctgctgtttatggtgggcaacctgatcatcatccccgtgggcatcaccttcttc
aaggaggagaccactacgccctggatcatcttcaacgtggtctccgacaccttcttcctc
atggacctggtgctcaactttcgcactggaatcatcattgaggacaattcagacatcatt
ttggaccctaaaaccattaagaagaagtacctaaaaacttggttcattgtggactttatc
tcctctatcccagtggattacatattcctcatagtggagaaagggatcgactcggaggtg
tacaagactgctcgggccctgaggatcgtccgctttaccaagatcctaagtcttctgagg
ctgttgaggctctccagattaatacgctacattcaccaatgggaagagatcttccatatg
acctatgacctggccagtgcggtgatgcggatctttaacctgattggtatgatgctgctg
ctgtgtcactgggacggctgtctacagttcctggttcccatgctgcaggaattcccctca
gactgctgggtgtccctcaacaagatggagaatgatacctggtcagagctgtactcgttc
gctgtattcaaggcgatgagccacatgctgtgcatcggttatggtcggcaggccccggag
agtctatcagatatctggctcaccatgctgagtatgattgtaggagctacttgctatgct
gtttttattggccatgcaacagctcttatccagtccctggactcctccagacggcagtat
caggagaagtacaaacaagtggagcagtatatgtccttccacaagctgcctgccgacttc
cgacagaaaatccatgactattatgagcacagataccagggcaagatgtttgatgaggag
agcattttgggagaactcagcgagcctctcagagaggaaattgtaaacttcaactgtcgc
aagctggtggcgtccatgccgctgtttgccaacgcggagccaaactttgtcacagccatg
ttgaccaagctgcgctttgaggtattccagccgcatgattatattataagagagggcacc
atcgggaagaaaatgtacttcattcagcacggagtctgcagcgtcatcactaagggcact
ctggcaatgaaactttctgatggctcttattttggagagatctgcttattgacgaggggt
cggcggacagccagcgtgcgagcagagacttactgtcgactctactctctgtctgttgac
cacttcaatgaggtgctggaagaatatcccatgatgagacgagccttcgagaccgtcgcc
attgaccgtctggaccgcataggaaaaaagaactccatcctgatgcacaaggttcagcac
gatctcaactctggtgtcttcaacaaccaggagaatgagatgatccaggagattgtcaag
tacgaccgtgaaatggtgaagctggtggacctccagcggccgcgggccatgtctatgacc
ccgtccatcggcggtatctttgctcctcctggccagccacagtcgggctctgctatcgcc
actctccagcaggctgtggctatgagcttttgtcctcaaatggcgagtcccctggtggga
ccagggactctgcagtctcctcgtatggtgcgacggttccaggtgatgcagaacctgtcc
agcccagtctccatgtctcctctccagtctcaaccccctcaggcgttcggaggagcattt
ggatctgcaatctctagcccgcctgtgcaaagcccactcgcagcttcagggcggactttc
cagtacttggcgagtgcaggaccctctggttcccagttgtccctagtacagcatcatgca
cccagccccacacagacccagcagaggcctgcctcacacaagagcacccactcccttcat
acaggtagcttgagccaggatacccgggccctgtctgcctcccagccttcactcccccag
gagggaacaccacaagctgcctctgcagcccccagccctccaccatcaacccgcacctcc
aacaactccatcggtccccctcagccctctcaccccagcctgccagggccgtcgggtgta
gggagatcaacgggagctcaacagagggtggcctttgcctccacacctcctcccggtgga
cctgctggaatgggggcagtagcagcagcagcagctgctggatcaggacctccagactct
ggagttcccaagaaagattcaattgtcagccttccagagctagactctgccagatcccgg
ctgtcttccaacttgtga
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