Larimichthys crocea (large yellow croaker): 104929707
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Entry
104929707 CDS
T04659
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03020
RNA polymerase
lco04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104929707 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104929707 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104929707 (polr3a)
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104929707 (polr3a)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104929707 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104929707
NCBI-ProteinID:
XP_010742631
LinkDB
All DBs
Position
XVI:complement(16653126..16675131)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLSYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
DKLQFMDHLKRPNLAYLQKRGLKKKISDKCRKRTICLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDPFVSEFLQSFDIAIEHNKVMEPLLTRAQENLNPLVVLNMFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKVRVSLPRPAIMKPMALWTGKQI
FSVILKPSKECPVKANLRTKGKQYCGKGEDLCYNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGSGLLKAKQDLLDDG
YKKCDEYIEALQTGKLQQQPGCTAEETLEALILKELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCPFEPALSQNELVLTADAIMKRADFLC
CRDSFLEEIKKFVKGISERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKEELPKVV
VQGIPEVARAVIHIDEQSGKNKYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPSPVKRPLLFE
NSDFHIPLIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagacagatgtggcgaaaaaaataagccacatctgcttt
gggatgaagtctgctgagcagatgcgtcagcaggcccacatccaggtggtcagtaagaat
ctgtacagccaggacaccaaacacactcctctgtcctatggagtgttggaccaccgtatg
ggcaccagtgagaaggacagaccctgtttgacatgtgggaaaaatctggcagattgcctg
ggacattatggctacttggatctggagctaccgtgctttcatgttggttatttcaaagcc
atcataggaatcttacagatgatttgcaaaacatgctcaagcataatgctgacgaaagag
gataaactgcagttcatggatcacttgaaaaggcccaacctggcctatctccagaaacga
gggttgaagaagaagatctctgataaatgccgcaaaaggacaatctgtctgaattgttct
gctttcaatgggccggtgaaaaagtgcggcttgcttaaaatcatccatgagaaatataaa
actaccaagaaagtggtggatccttttgtgtcagaattcctgcagtcttttgatatcgcc
atcgagcacaacaaagtgatggagcccctgctgaccagagcgcaggaaaacctgaaccct
ctggtggtgctgaacatgttcaagagaattccccaagaagacattcccctgctgctgatg
aaccctgaggcagggaaacctgcagacctcatcctcacccgcctcctggtgcctcctctc
tgcataagaccctctgtggtcagcgacctgaagtcaggcaccaacgaggacgacctcacc
atgaagctcaccgagataatcttccttaacgatgtcatcaaaaagcatcgtatgaccggg
gcgaaaacccagatgatcatggaggactgggacttcctccagctgcagtgtgctctttac
atcaacagtgagctttctgggatccccctcaacatggcacctaaaaaatggaccagaggc
tttgtgcagagactcaaggggaagcaagggcgattcagaggaaacctctccggaaaaaga
gtggacttctcaggcagaactgtcatttctcctgacccaaacctgaggatcgacgaggtg
gctgttcccgtgcatgtggccaaaatcctgacgtacccagagagggtgaacaaggccaat
ctggagctcatgaggaaactagtccgcaatggtcctgaagttcaccccggagctaacttt
atccagaatcgtcacacgcagatgaaaaggtttttgaaatatggaaaccgtgagaagata
gctcaggagctgaggtttggtgacgtggtggaaaggcacatgatagacggagacatagtc
ctcttcaatcgacaaccgtctctgcacaaactcagcatcatggctcacatcgccagagtc
aaacctcacaggacttttcgattcaatgaatgcgtgtgcaccccgtacaatgctgacttt
gacggcgatgaaatgaaccttcacctccctcaaactgaagaagccaaagctgaagcactt
atcctaatggggacaaaagccaatcttgtcacaccgagaaatggtgaacctctaattgcg
gctattcaggactttctgacaggagcctacctcttgacgctgaaggacaccttctttgac
agatcaaaagcctgtcagatagttgcatcaatccttgtgggcaaagatgagaaagtcagg
gtctctctcccccgcccggctataatgaagcccatggctctgtggacaggcaaacagatc
ttcagcgtcattctgaagccgagtaaggaatgtccagtcaaggcgaacctgaggaccaag
ggcaaacagtactgtggcaagggagaggatctctgttacaatgactcgttcgtggtgatc
cacaacagtgagctgatgtgtggtagcatggacaagggcaccttgggatccggctccaaa
aacaacatcttctatatcctgctgagagactgggggcagctggaggctgctaatgccatg
tcccgcctggctagactcgctccagtatatctctccaatcgtggattttctatcggcatt
ggtgatgtgacacctggctcgggtctgcttaaggccaaacaggacctgctggacgatggt
tacaagaaatgtgatgaatacattgaagctctacagacgggcaagttgcagcagcagccc
ggctgcacagcagaggagactctggaggctctcatcttgaaagaactgtctgtcatcaga
gaccgagctggcagtgcttgcctcagggaactcgacaagagcaacagccctctgatcatg
gctctctgtgggtccaaaggatccttcattaatatctctcagatgattgcctgcgtcggt
cagcaggccataagtggctctcgagtgcctgatggttttgaaaatcgatccctgcctcac
tttgagaagcattcaaaattacctgctgctaaaggctttgtggccgacagcttctactct
ggcctgacgcccacagagttcttcttccacaccatggctggtcgggaggggctggtggac
actgctgtaaaaactgcagagactggatacatgcagaggcgtctggtcaagtcccttgag
gatctgtgctcacagtacgacctgacagtacgcagctccacaggtgacatcatccagttt
atttatggaggcgatggtctggaccctgctgccatggagggaaaggatgagccgctggag
tttaagagagtcctagacaacattcgagcggtctacacgtgtccattcgagcctgcactc
agtcaaaacgagctggtcctcactgcagatgctatcatgaagagggctgacttcctgtgc
tgcagagacagcttcttggaggagataaagaaatttgtcaaaggcatctcagaaaggatc
aagaagaccagggacaagtacggcatcaacgacaatggcaccagcgagcccaaagttctt
tatcagctcgatcgcataacgcccacccagctggagaagtttcttgaaacctgcagagac
aagtacatgagggcccagatggagccgggctcagcagtaggagctctttgtgctcagagc
attggagagcccggtactcaaatgaccctgaaaacttttcactttgctggtgtggcatct
atgaacatcactctgggggttcctcgcattaaagagatcatcaatgcctccaaaaacatc
agcacccctataatcactgctcatttggacgtggaagacgacgctgactttgccaggctg
gtgaaggggaggatcgagaaaactctcctaggagagatttctgagtacattgaagaggtt
tttctaccagatgactgtttcatccttgtgaaactgtctctggagagaataaggctgctg
cgactggaggtaaatgcagaaacggtgcgttactccatctgcatgtctaaactacgagtg
aaaccaggagacatcgctgtgcacggcgaggcggtggtgtgcgtgtctccacgggagaac
agcaaaagctcaatgtactacgtgctgcagtcactaaaagaggaacttccgaaggtggtg
gttcaaggtatacctgaggtggcccgagctgtcattcacattgatgaacagagcggcaag
aacaaatacaaactcctggtggagggggacaatctcagagctgtcatggcaacgcacgga
gtgaatggaagcaggaccacatcaaacaacacgtatgaggttgagaagacattgggtatt
gaggctgctagatccaccatcatcaatgagattcaatacaccatggtgaaccatggaatg
agtattgaccgccgtcatgtcatgcttctagcagatctaatgtcctacaagggagagatt
ctgggaatcaccaggttcggtttagccaaaatgaaggagagcgtcctcatgttggcctcc
ttcgagaaaacggctgatcatctctttgacgctgcctacttcgggcagaaggactcagtc
tgcggtgtgtctgagtgtatcattatggggattcctatgaacattggaacaggattgttt
aaactcttacacaaggccgacaaggatccctctccggtcaaaaggcctctcctctttgaa
aactcagacttccatatacctctgatcacatag
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integrated database retrieval system
