Larimichthys crocea (large yellow croaker): 104929758
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Entry
104929758 CDS
T04659
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104929758
Membrane trafficking [BR:
lco04131
]
Endocytosis
Others
Others
104929758
Endosome - Lysosome transport
104929758
Endosome - Golgi transport
104929758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
DUF4909
Motif
Other DBs
NCBI-GeneID:
104929758
NCBI-ProteinID:
XP_010742664
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Position
III:18538580..18598897
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AA seq
1243 aa
AA seq
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MGLWTFWSFSLLAFVLMHHFQPKFVAQAELSSAGTNDRLYRLEVTQLEARVTQRSKVSLK
VDNRTKVLSAFETETPDAEPNHDKQVEKDAQSGLEAPIGVKTAPNYHRLKIPGKKYSDTY
EDNQRRRTATIISEKKIPDPRKRGKRSVDTAHTENVERSTSGQAQLRERFVETVHGGSNS
RAEYRRVGEEARGSNPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKLYDF
NLGAVTESSLWRSSDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVELAVLI
SSDEGASFEKHPINFNILSLLFHPAQENWILAYSHDSKLYSSVDFGRKWQLVHDNVMPGR
FYWAVMGLDRESDVVHIETRIAKGRAKYVKCRAQQCSEGNRQYLFPGYVDTNSLVVQDEY
VFTQVTKSGRASYFVSYMREPFKQMQLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYS
LYISDSPGVYFTLSLENLRTSRGPAGNLLVDFYKIEGINGMYLANKLVDSHIKSFITYNK
GQTWALLPAPATDVAGNNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIVATGNI
GTELSSANLGMFITSDAGNSWRQIFDEEHNVWFLDNGGAMLAVLHAEAPIRNLWISLDEG
KKWDRHSFSLAPLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFSRRCMDGD
YQTWHLHNKRELCVMGEKQIYMKRRPGNRCMLAQDYSRIYSSEPCLCTAYDFECDYGWER
QTNGKCSPAFWFNPNGAAKSCSSSQSFLNSTGYRKVLSNNCKEGGTNVYSPRRQGCRPRP
PQGLRLSTSQGELSATVGSNVTFTVYLDDGDSLRTSIQLDFGDGIKITYSNLSRTDDGIK
HIYRTTGIYRVTASAENSQGSDSSTLFLHITSPVERVYLSAPIVTIRGKEANLTAVVWPS
HTRTLTFFWWFDNSSEPIITLEGSISYTFQRRGKNKVTVQVASGSTIMQDSKVITVKEFF
RSLLLSFSPALDEHNPDIPEWRDDIGRVVRTALSQVSGVPEEQLLVSLYPGLPSTAELFI
LPDEHTSSEHKRSSEESLESISNIFVTALNQGLVQFELKADIRIIVYMTQQTLAPLVDSN
SIHSGSAMLMLLTVVFVGLAAFFIYKFKRKIPWIHVQTEDSHEKEPEVISTVGQNDNMSK
VKLSEFPSPKELMEKELEARSRGGNGRNMERIVTREFPNCTNV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgggactgtggacattttggagtttttctcttttggctttcgtattgatgcaccacttt
caacccaagtttgtggctcaagcggaattaagttctgccggaacaaacgacagattgtat
cgcctggaggtaacacagctggaggcacgtgtaacccaaagatcaaaagtctcactcaaa
gtcgataatcgcacaaaagttttaagcgcttttgaaacagaaacacccgatgcggaaccg
aaccatgacaagcaagtggagaaagatgcacagagtggacttgaggcaccgatcggcgtc
aaaactgcaccaaactaccaccgtctcaaaatacctggtaaaaagtatagtgacacgtac
gaagacaaccaaaggcgacgcacggcgactataatatcagaaaagaaaatccctgaccca
agaaagaggggaaaaaggagtgtggatacagcacacacagaaaatgtggaaaggagtaca
agtggacaagcgcagttaagagagaggtttgtggagactgtccatggtggttccaactcc
agagctgagtaccggcgcgttggggaggaagccagggggtctaacccgaggcaaagtgaa
ccgcacctggacacttccacttttgcgctgtcgggagactctgcgcacaaccaggcgatg
gtgcactggtccggacacaacagcagcgtgatcctgatcttgactaaactgtacgacttc
aaccttggggctgttactgagagctcactttggagatccagtgattatggaagcacctac
accaaactcaatgacaaagtgggctcaaggacagttttaagttacctctacgtctgccct
accaacaaacagaagataatgatgcttagtgacccagaggtagagctcgctgttctcatc
agttcagatgaaggggcaagctttgagaagcatcccattaacttcaatatcctaagcctg
ctcttccaccctgcgcaggagaactggatactggcctacagtcacgacagcaagctgtac
agttcagtggactttgggaggaaatggcagctggttcatgacaacgtgatgccaggccga
ttctactgggcggtaatggggctggacagagaatcagatgttgtccacatcgagacgcgc
atcgcaaaaggccgtgccaagtatgtgaagtgcagagcccaacaatgctcagaagggaac
agacagtacctctttcctggatatgtagacaccaactcactggttgttcaagatgaatat
gttttcacacaggtaaccaagtcaggacgagccagttactttgtctcctacatgagagaa
cccttcaagcagatgcaattacctaaatattgtctaccaaaggacatgcatattatcagc
acagatgagaagcaggtatttgctgcagtccaggagtggaatcagaacaacacttacagc
ctttatatctcagactcccctggggtctactttaccctttcattagagaatctgagaacc
agcagaggccccgccggtaacctactggttgacttttataagatcgaggggataaatggc
atgtatctcgccaacaaactggtggatagtcacatcaagagttttataacatacaacaag
ggacagacatgggccctgctgccagcgcctgccactgatgtggctgggaataaccttcac
tgcatcctgccattttgttcgctgcatcttcatctggagatgtcggagaacccctacacg
tctggacccatcaccagcaaaaagtctgtaccgggcatcattgtggctacagggaatatt
ggaacagagctgtcctccgccaaccttgggatgtttataacatcagatgcaggaaatagc
tggagacagatttttgatgaagagcacaacgtttggtttcttgacaatggaggagctatg
ctggcagtcttacatgcagaggcgcctattcgaaacttatggatcagtttggatgaagga
aagaaatgggaccgtcacagtttctccttggcacctctgtatgtggatggagttttaatg
gagccagaatctgacaatcacattatcactttctttggacacttcagccatcgctcagag
tggcagcttatcaagatcgactacaagggcctctttagcaggaggtgcatggatggagat
tatcagacgtggcacctgcacaacaagcgagagctgtgtgtgatgggtgagaagcaaatc
tatatgaagcgtcgtccgggaaaccgctgcatgctggcccaagactactcaaggatctat
tcctcggagccatgcctctgcacagcctatgattttgaatgtgattatgggtgggaacgc
cagacgaacgggaagtgctcccctgctttttggtttaatccaaatggtgccgctaaaagc
tgcagctccagccaaagcttccttaacagcacagggtatcggaaggttttgtccaataac
tgtaaggagggagggacgaatgtgtactcacccaggaggcaggggtgtcgtcccagacca
ccccaaggtctccggctgtctaccagtcaaggagagctcagtgccactgttggaagcaac
gtcactttcacggtttaccttgacgatggagactcgctgaggaccagcatccagctagac
tttggggatggcatcaagatcacatactctaacctgagcagaactgatgatggcatcaag
cacatctacagaacaactgggatttaccgagtgacagcttcagctgaaaacagccaggga
tctgacagcagcacactgtttttacacatcaccagtccagtggagcgtgtatatctctct
gctcctattgtaaccatccggggaaaggaggctaatctaactgcagtggtttggccaagt
cacaccagaacattgaccttcttctggtggtttgacaacagctctgagcccattataacc
ttggagggaagcatctcttacacatttcagagaaggggaaaaaacaaggtcacggtccag
gttgcttctgggagcaccataatgcaggattcaaaagttataactgttaaagagttcttc
aggtcgctgttgttatcattctcgccagctcttgatgaacacaatcctgacatcccagag
tggagggacgacatagggcgcgtggtgcggacagctctgtcacaggtgtctggagttcct
gaagagcagctgctggtgtctttatatcctggacttccaagtacagcagagctctttatc
ctacctgatgagcatacatcaagtgagcacaagaggagcagcgaggagtctctagagagt
atatcaaatatttttgtcaccgccctgaaccaaggactggtccagtttgagctgaaagcc
gacatccgcattattgtgtacatgactcagcaaactttggcaccacttgtggattcaaac
tccatccacagtgggtcggccatgctaatgctcctcactgtggtatttgttggtttagct
gcattcttcatctacaagttcaaaaggaaaatcccttggatccatgttcagactgaggac
agtcacgagaaggagcccgaagtgatcagcacagttggtcagaacgataacatgtccaag
gtcaagctcagcgagtttccgtctccgaaagaactaatggagaaggagctggaggccagg
agcagaggaggaaatggaagaaatatggagaggattgttacaagggaatttccaaactgt
actaatgtctaa
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