Larimichthys crocea (large yellow croaker): 104929788
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Entry
104929788 CDS
T04659
Symbol
u2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104929788 (u2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104929788 (u2af2)
Spliceosome [BR:
lco03041
]
Complex A
U2 snRNP components
U2 related factors
104929788 (u2af2)
Complex B
104929788 (u2af2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
104929788
NCBI-ProteinID:
XP_010742703
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All DBs
Position
XIII:14858188..14865256
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AA seq
488 aa
AA seq
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MSDFDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSANVEQVTGGHSISPSSYPQDNAGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKA
MQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFF
NAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRP
HDYQPLPGMSENPSVYVPGTQPINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFG
PLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNAT
LTSINQTPVTLQVPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECS
KYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPD
AYHRRDFW
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgaatttgaaagacagctctctgaaaacaaacaagctgagagagac
aaggagaaccgccaccaccgccggtcctcctcccgtagccgcagcagagagaggaaaagg
aggagcagagacagggacagacgcagcagggaccgccgcggggacagtaaggagcgcaga
cacagacgcagtgctaatgtagaacaagttactggtggtcattcaatctcaccatccagc
tacccccaggacaatgctggaagccgttccccacaccgcgagaagaagaagaaggtgaag
aagtactgggatgtccctccacctggttttgaacacatcactcccatgcagtacaaagcc
atgcaagctgcgggacagatcccagccacagccctcttgccgaccatgactccagatggc
ctggctgttactcccacccctgtacctgtcgtgggcagccagatgacccggcaggcccgt
cgactctatgtgggcaacatcccattcggtatcacagaagagtctatgatggacttcttc
aatgcccagatgcgtttgggtggtcttactcaggcccctggaaaccctgttcttgcagta
cagatcaaccaggataagaattttgccttccttgagttccgttcagtggacgaaacgaca
caggctatggcctttgatggcatcatctttcaaggccagagtctcaagattcgtcgtccc
cacgattaccagcccctacctggcatgagcgagaatcccagtgtctatgtgcctggtaca
cagccaattaatggtgtggtgtccacagtggtgcccgactcggctcacaagctcttcatc
ggcggcttgcccaactatctgaatgatgaccaggtgaaggagctgctgacgtcattcggc
cccctgaaggccttcaacctggtgaaggacagtgccacaggcttatctaaaggctacgcc
ttttgtgaatatgttgacgtcaacctcaacgatcaggctatcgctgggctgaacggcatg
cagctgggagacaagaagctcctggtgcagagagccagtgtgggatccaagaacgccact
ctgacaagtataaaccagaccccagtgacgctgcaggtcccaggtctgaacagctcagtg
actcagatgggtggcctgcctaccgaggtgctgtgtctgatgaacatggtggccccagag
gagctgctggatgatgaagaatatgaggagatcgtggaggatgtcagggaggagtgcagc
aagtacggccaagttaagagcattgagatacctcgacctgtggacggcctggaggtgcct
gggaccggaaagatctttgtggagttcatgtcagttttcgactcccagaaggccatgcag
gggctgacaggaaggaagtttgccaacagggtggtggtgaccaaatactgcgatccagat
gcttatcaccgccgggacttctggtag
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