Larimichthys crocea (large yellow croaker): 104929792
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Entry
104929792 CDS
T04659
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04020
Calcium signaling pathway
lco04080
Neuroactive ligand-receptor interaction
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104929792
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104929792
04082 Neuroactive ligand signaling
104929792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104929792
Ion channels [BR:
lco04040
]
Ligand-gated channels
Glutamate (ionotropic)
104929792
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
104929792
NCBI-ProteinID:
XP_027142241
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All DBs
Position
XIII:complement(14948763..14994280)
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AA seq
1981 aa
AA seq
DB search
MVAAAAWGGDTRKTDTSKRKDVKKDGGTQEKRGERLVKNKWAGLVDASPHLLLRPSPRER
DAGAMMNFNIAVIHAGATVQAEAAVAGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWL
QVNDSSPKTVLSQLCELLAARPLQGLVYEEERPPRTAWGPLAPMLEFVSAQTGLPIVAVG
GGAGLGRMPQESGSIFLQFSSSTALQLEVIFEVLEEYDWTAFSVVSTRHHGYQEFLSVVE
GLTDGSFIGWEKKSVVILNVTDDPGGARTRRLLKENEAQVRLLYCSQEEAELVFRAAWAA
GQAGASHMWFAVGPALSGLGMESLPRALFAVRPQGWRDEPRRRIARGVSVLTHGAVATRK
DYGTTGGPNFVTNCMTDANQTQRLRGRMRYFSNITLGGRDYSFDSDGYLANPFLDVISWT
PGRGWEDVGWWENGVLRLRYPAWSRYGPFLKPPDDAQHLRVVTLEERPFVIVELADPASG
TCIRDSVPCRRPLNASAIHEGVAPMKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGK
KIDGVWNGMIGEVVYKRADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPS
AFLEPYSPAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLQTGKKAGGSTFTIGKSVWL
LWAIVFNNSVPVENPRGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSD
KKFQHPEEQYPPLKFGTVPNGSTEKNIRSNYPDMHQYMGKYNQRGVEDAILNLKTGKLDA
FIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDE
IEMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRH
CMATSSGKLDFLLAISRGMYSCCSFEDETAPGGSKSLPTHHHTAMVTVPSQPHVVSTSMT
NAAIAMAQQQQPPQQQQPQPVYKTPLPGSPPTVVHSGTALGPSNTPIAGAPLPCSTFLPR
PDRRLAVVDRWRLPKSATATNPLAVRGTITDMGPFAQKVPPNWASTAGGGGGLDGYKRYY
GPIDPEGLGPCMEQQAGSQTPKTMPRGHPQPPPASVAFYSEKGMDHGVGKRVVGGGSGGQ
GKGAVKPLGTPRLPSKSQAPLPPTPPLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILP
LGRRGGARDGVREGGGRRARPLSPPLSLPVPVPLSPSYTPPSPSASLHYTSSSSSSTTSS
TSTSSSASSSRSTSPTYSYSSSRSTRDRTGGIDGEDDDDDEETEESSLLLGRGRERERSI
IRPRSLSHGRLPPPIPPRKPRTSWGDRERERERERGGSQLSQLQEWWASWSERERSGAGG
DTERQKREKKRRKEKEKEKKKKKKNKKRKKREERERERERERKRRKVKKKKKKALKTKKR
KKSTGGRRSEPEEGDVEPEREGEAEGEREGGIQDYSSFSAQYRSSFGEKGRDSWEGERER
VRREGGDEGNDRDQEDSSRIREKRPKSSRSHSRHHTPSKRYPNLNKLPASVKFWVNGRGD
DSNTPPTSLHPLLPSSKRRRSGGMDREDSGRLGERRPLLMHYEKEKAQTREGLSFHEWDS
EDDEDDDDDEEEEERERVRDDRGRRVGRGAVSESERDRARAEDSYSDEGSSGEFGRFERY
WEGGAGGSGTGIGGIGGGGWFFGTYPSREKGGSINSRDDSLLGTRAEGWIGTDFWGSGPG
VGWGSGGGSGGLGTQWPPPPAAFPPPRRYWSMDKIPVKGEKKWKSGGGKSKGRARDRGEE
AGRATMCSCSLYPQPHPYPHPHSRSHTSHSKRAATALSHSQEELLPHCHSFSGGSRPKPL
PPKPDPSQAKSGSQSNLSLSTQPTDHPPQPSPSPPQPSMSPTSLPMPIPPPPSSSSVSPP
AGVGMVGQGQAQASASAKLQYQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESE
V
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcggcggcgtgggggggggacacccgcaaaacggatacctcaaaaaggaag
gatgtgaaaaaggatggagggacgcaggaaaagaggggggaaaggctggtgaaaaacaag
tgggcaggtctggtggacgcctccccccacctcctgctccggcccagcccgcgggagcgt
gatgcgggggccatgatgaacttcaacatcgccgtgatccacgccggtgctacggtgcag
gcagaggcggcggtggcggggcctgggggaagggtgctctaccccggcttcggccgggta
tacggctccctgggggagagcgtggtcacccagtggggctctgctaacgtcatctggcta
caggtgaatgacagtagtcctaagacggtgctgtcccagctgtgtgagctgctggcggcg
cggcccctgcagggtttggtttatgaagaggagaggccacctcgcacagcctggggtcct
ttggcccccatgctggagtttgtctctgcgcaaacaggactgcccatagtggctgtagga
gggggagcggggctggggaggatgccacaggaatcaggttccatctttctccagttcagc
tcctctactgccctccagttagaggtcatctttgaggtgctggaggagtacgactggaca
gccttttccgtggtgtccacgcgtcaccatggctaccaggaattcctgtctgtggtggag
ggcctgacggacggctcgttcatcggctgggagaagaagagtgtggtgatcctgaacgtg
accgacgaccctgggggggcacgcacgcgcaggctgctgaaggagaacgaggcgcaggta
cgtttgctgtactgctcacaggaggaggccgagttggttttccgagccgcctgggccgcc
ggtcaggctggagcctcgcacatgtggtttgctgtggggccagctctctcaggtttgggc
atggagagcctgccccgggctctgtttgccgtgcggccccaggggtggagggacgaacct
cgccggaggattgctcggggtgtgtctgtgctgactcacggggcagtggcaacgcgcaag
gattacgggacgacgggtgggccgaactttgtcaccaactgcatgacggatgccaatcag
actcagagactgcggggtaggatgaggtatttcagcaacatcacgcttggtggtcgagac
tactccttcgatagcgatggttacttggccaacccgttcctggatgtaatttcgtggaca
cctggacgtggatgggaagatgtaggctggtgggagaacggcgtgctgaggcttcggtac
ccagcctggtctcgctacgggcccttccttaagccacctgatgatgcccagcacctgcgc
gttgtcacactggaggagaggccatttgtcatcgtggagctggcagaccctgcatctggg
acctgcatccgtgactcagtgccctgcagacgaccccttaatgccagtgccatccatgag
ggtgtggctcccatgaagcagtgctgcaagggcttctgtattgacatcctcaagagattg
gctaagattgtcggcttcacctacgacctttacttagtcaccaatgggaagcatgggaag
aaaattgatggtgtttggaacggcatgattggagaggtggtgtacaagcgagcggacatg
gccatcggttcgctgactatcaatgaggagaggtcggaggtggtggatttctccgtccct
tttgtggagacggggatcagtgtaatggtctcccgtagcaacggaactgtatcaccatcc
gctttcttagaaccctacagtccggcagtgtgggtgatgatgttcgtcatgtgcctgact
gtggtagctgtgactgtcttcatttttgagttcttcagccccgtgggctacaaccgcagt
ctccaaactggcaagaaggccggaggctctactttcactataggaaagtctgtatggctt
ttgtgggccattgtcttcaacaactctgtaccagtagagaaccccagaggaaccaccagc
aagatcatggtgctgatctgggccttctttgctgtcatctttctggcctcctacactgct
aacctggccgccttcatgattcaggaggagtatattgacacagtgtcaggcctctcggac
aagaagtttcagcatcccgaggagcagtacccacctctgaagtttggaacagtgcccaac
gggagcacagaaaaaaacatccgctccaactacccagacatgcaccagtacatgggcaaa
tacaaccagagaggggtggaggacgccattctgaacctcaagactgggaaactggatgct
tttatttatgatgctgcagtattgaactatatggccaggaaggacgaaggttgtaaggtg
atgaccataggctcggggaaggtttttgccaccacaggctacggtatcgccctgcacaaa
aactcacgctggaaacgtcctcttgacctggccctgctgcagctggtgggagatgatgaa
attgagatgctggagcgcctctggctgtccggtatctgccataatgacaaaattgaggtg
atgagcagtaaactggatattgacaacatggctggggtcttctacatgttgctagtggct
atgggtctcagtctgctggtgtttgcctgggaacacttggtctactggaagctgcgacac
tgcatggccaccagttctggcaaattggactttctcctggcaatcagcaggggcatgtat
agctgctgtagcttcgaggatgaaacagcaccaggcggctctaaatctttgcctactcat
caccatactgcaatggttacagtcccatcccagccacacgttgtctcaacgtctatgacc
aatgcagccattgccatggcgcaacagcagcaaccaccgcaacagcagcaaccacagccc
gtctacaaaacacctctaccgggctctcctcccaccgtggtgcattctgggacagcactg
ggtccctctaacacaccaattgctggtgcacccctcccttgctccaccttcctgccccgg
ccagaccgcagactggctgtggtggatcgctggaggctgcccaaatctgctacagccacc
aacccactggctgtaagggggaccattactgacatgggaccctttgctcagaaagtccca
ccaaactgggcttcaactgctggagggggtgggggacttgatggttataagagatactat
ggtcccattgaccctgagggactggggccctgcatggagcagcaggcagggtcccagacc
cccaagactatgcccaggggccacccccagcctcctccagccagtgtggccttctactca
gagaagggcatggaccacggggtcgggaagagggtggtgggaggtggcagcggaggtcag
gggaaaggggccgttaaacctctgggcactcccagactgccttctaagagtcaggcccct
ctgcctcctacacccccgctgccacacccctctccccctctcccctcatccttctggagg
aagcgcaggcctaagaagcccaaagagcctggagggccactatacgagaacattctgccc
ctggggcggaggggaggagcacgtgatggagtgagggagggaggagggaggagggcacgc
cccctctctcccccgctctcacttccagtgccagtacccctcagcccctcttacactcct
ccttctccctctgcatccttgcactatacgtcctcgtcctcttcgtcgaccacctcatct
acgtccacgtcctcatctgcctcatcttctcgctccacctctcccacctactcgtacagc
tcctccaggagtacacgggacaggactggaggaatagatggtgaagatgatgatgacgat
gaggagacagaagagtcaagcctcctccttggcagggggagggagagggaacgctcaatc
attcggcctcgttccctcagccacgggcgcctgccaccccctataccccctagaaaacca
cgcacatcctggggtgacagagaaagggaacgggaaagggagagagggggaagccaactg
tctcagctccaagagtggtgggcaagctggagcgagagagagaggagtggagcaggtggg
gatactgagaggcaaaaaagggaaaagaagaggaggaaagaaaaggagaaagagaagaag
aaaaagaaaaagaacaaaaagaggaaaaagagggaagaaagggaaagagagcgagagagg
gaaaggaagcggcgaaaggtgaaaaagaagaagaagaaggcacttaagacaaagaaaagg
aagaaatcaactggggggagacgctctgagccagaggagggggatgtagagccagagagg
gaaggagaggcagaaggagaaagagaaggaggaatacaagactactcttccttctctgcc
cagtatcggagctcatttggggagaaagggcgggattcatgggaaggagagagggagaga
gttaggagagagggaggagacgagggcaatgacagggatcaggaggacagcagcagaatc
agggaaaagcgtcccaaatcctcacgctctcattcaagacatcatacccccagtaagcgc
taccctaacctcaacaaactccctgcatctgtcaaattttgggtaaacggaagaggagat
gattctaatactcctccaacatccctgcacccactccttccatcctccaagcggagaaga
agtggagggatggacagagaagacagtggtagacttggagagcggcgtcctttgttaatg
cattatgaaaaagagaaagcacagacaagagaagggctgtctttccacgagtgggactct
gaggatgacgaggatgatgatgatgatgaggaagaagaagagagagagagagtgagggat
gacagggggaggagagtaggtaggggggcggtgtctgaatcagagagggacagggccagg
gcagaggacagttattcagacgagggctcatcaggggagtttggccgttttgaaagatac
tgggaaggaggtgcagggggaagcggcacaggaatagggggcataggtggaggagggtgg
ttctttggcacttacccctccagagagaaagggggcagtatcaacagtcgggatgattct
ttactaggaacaagggctgagggatggataggaactgatttctggggttcagggccagga
gtaggttggggatcagggggaggcagtggagggctcggcacacaatggccaccaccccca
gcagccttccctcctcctagaagatactggtctatggacaagatccctgtgaagggagag
aaaaaatggaagagtggagggggcaagagcaaggggcgagctagggacagaggggaagaa
gcaggacgggccaccatgtgttcctgtagcctttacccccaaccccatccttacccacat
cctcacagccgctcgcacacctcccactccaagagagcagccacggcgctttcccatagc
caggaagagcttctcccccactgccacagcttcagcggaggttctcgccccaagcctctg
ccccccaaaccagatcccagtcaggccaaatcaggcagccaatctaacctcagcctcagc
acacaacccacagaccatccaccccaaccctcgccgtcgccaccacagccgtccatgtct
cccacctccctcccgatgcccatcccgcctccgccctcctcatcctctgtctcaccacca
gcaggggtagggatggtgggccagggccaggctcaggcttcggccagtgccaaactccag
tatcagagactgcgctcggtgccacagccacggaggttctactccccccacctgccactc
aaagccaagagcctgtgctcacgcagagggtcggcccacttctccagcctggagagcgag
gtatga
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