Larimichthys crocea (large yellow croaker): 104929809
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Entry
104929809 CDS
T04659
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X2
KO
K14304
nuclear pore complex protein Nup85
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104929809 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104929809 (nup85)
03036 Chromosome and associated proteins [BR:
lco03036
]
104929809 (nup85)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104929809 (nup85)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104929809 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
104929809
NCBI-ProteinID:
XP_019117452
LinkDB
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Position
XII:21901937..21910925
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AA seq
652 aa
AA seq
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MEEVDVEPAVTNIPAASDGTHLGFAWGPGDILVYETLYKTSGAKASGCPFIHEVRKDEDI
YSPILRKLFNESHHIFVGLQTIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVST
KVSQVALQYGNQVSILLAIELIWNLCEVLFIEAAPAGSLLLHLLDWVRLHKADVDEKARE
VLQSESPAEHHDYWDVVVSYVLQGRLEEARQMLVKQATLQPAARKMYKLMDSLLSKMPFY
NPGGTQTLTEFDVKWRHWHEEVDRCLQDNSFASNKHLELICKVLVGDEDTLLAHKDLLST
WYHFLVTRLLFCHPTVKPTELHYYAQSCMTMFLDPRSVPEPLDSILLAAFEFDIHQVIKD
CSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVDY
FDHCPEFGRVYLELQIERVPLDTERKALKVLRICEQRQMSEQVRSICKIMAMRALRNNRL
GSALSWSIRAKDAAFATLISEKFLQDYCARGTFSDLDLIDNLGPAMLLSDRLTFLGKYRE
FHKLYGEKRFSEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTHELMFC
LEELTSSLNNTTPGTDRPMQDEDIEVTKVELLRLALARNLAMAIVKEGTVEA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtcgacgtggagccggcggtcaccaacatccctgcagccagcgatgggaca
catttgggatttgcatggggacctggagacatcctcgtgtatgagaccctttacaaaaca
tcaggtgctaaagcgtcggggtgccccttcatccatgaggtcaggaaagacgaggacata
tattcgcccattttacgcaaactcttcaacgagtcacatcacatcttcgtgggcctgcaa
acgattagagaggacctcccgagcaagaacaaaaaaccccaatttgtcagcatcagtaaa
aactatagatctgtcatacgagcctgtatggaggagcttcagcaagtagcagtttctaca
aaagtttcacaagtggcgttgcaatatggaaatcaggtgtccattctgttggccatagaa
ctgatctggaatctgtgtgaagtgctgttcatcgaagctgctcctgcgggttccctgctg
ctccacctcctcgactgggtgaggttacacaaggctgatgtggatgagaaggccagagaa
gtgctgcaaagcgagagccctgctgagcaccatgactactgggatgtggtggtgagttac
gtgctgcagggcaggctggaggaagccagacaaatgctggtgaagcaggcgacgctgcag
cccgccgccaggaaaatgtacaagctgatggactctctgctcagcaagatgcccttctac
aaccccggtggcacccagacgctgacagagttcgacgtgaagtggagacactggcacgag
gaggtcgaccgctgccttcaggacaactcgttcgccagcaacaaacacctggagctcatc
tgcaaggtcctcgtgggagacgaggacacgctgctggcacacaaggacctgctgagcacc
tggtaccacttcttggtcactagactgctcttctgtcacccgacagtcaaacccactgag
ctgcactactacgctcagtcatgcatgaccatgtttctggacccgaggagtgtcccagag
cccctggacagcatcttactagctgcctttgagtttgacatccatcaggtcatcaaagac
tgcagcatcgctctcaacaactggtggttcgtggcccatttgacggatctgttggatcac
tgcaaactcctccagtctcacaatctacactttggatccaacttgagagagtttctcctg
ttagaatatgcttctggtctcttcactcatcacagtctgtggcagttggctgtggactac
tttgaccactgcccagagtttggtcgagtctacctggagctgcagatcgagcgcgttcct
ttggacacggagcgcaaagctctcaaggtgctcaggatctgcgagcagaggcaaatgtca
gagcaagtgcggagtatctgtaagatcatggccatgcgggccctgaggaacaacagactg
ggctcggctctctcctggagcatcagggccaaagatgctgcctttgccacgctcatttca
gagaagttcttacaggattactgcgccagagggacgttctccgatttggacctgatagac
aacttgggtccagcaatgctgctcagcgacaggcttactttccttgggaagtaccgcgag
ttccacaagctgtacggagagaagcgcttcagcgaggcggccaagctgctcctctccctc
atgacggccaagatcgccccccgaagcttctggatgactctgctgaccgacgccctgccg
ctgctggagcagaaagaggtgatcttctcagcagaccaaacccacgagctgatgttctgt
ttagaggagctcacctcctcactgaacaacaccacacccggcacagacaggcccatgcag
gatgaagacatagaggtgaccaaagtggagctcctgagactcgctctggccaggaatctg
gctatggccatcgtcaaagagggaactgttgaagcatga
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