Larimichthys crocea (large yellow croaker): 104929855
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Entry
104929855 CDS
T04659
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
lco04510
Focal adhesion
lco04540
Gap junction
lco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104929855 (pdgfd)
04020 Calcium signaling pathway
104929855 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104929855 (pdgfd)
04540 Gap junction
104929855 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104929855 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lco04052
]
104929855 (pdgfd)
Cytokines and neuropeptides [BR:
lco04052
]
Cytokines
Growth factors (RTK binding)
104929855 (pdgfd)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
104929855
NCBI-ProteinID:
XP_019131675
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All DBs
Position
VII:complement(13285416..13336640)
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AA seq
378 aa
AA seq
DB search
MNGPVVFQMWMVLLFLGTMTGVGRAQVSTARVMRGNIRRDDSNRLTTDFYRKEENITVTP
VGGTIHSPRYPSAYPRNLLLSWKLLSPPGSRIHLEFDGHFGLEEAENGVCRYDFVEVEDQ
SETSTIIWGRWCGQKAPPSLNSKTNMLRVTFKSDDYFVAKPGFKVYYSLLYDTPLPASNT
NWEAVTMPMSDSSVGQIPAAVTEVPFSLEDLDRTIAAFDTVEQLLRSLSPDTWRQDLDSI
YTQTHIHYRSRAYHLASRHNKVDLNRLYEDVKRYSCTPRNYSVNLREELRATNAVFFPRC
LLVKRCGGNCGCGTDNWNNGCTCQASKTTVKLHEVLKYAPEVTPYQRHRRPRVHWVIDEI
FLTHHEKCECACPSQPPR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaccggtggttttccagatgtggatggttttattgtttttggggactatgacc
ggggtcggcagggctcaggtctccaccgccagagtgatgaggggcaacatcaggagagac
gacagcaatcgcctcaccacagacttttaccgcaaagaggaaaacatcacagtaacgccc
gtgggtggaaccatccacagcccacgctatcccagcgcttacccccgcaacctgctgttg
tcttggaaactgctgtcaccgccagggagccgcatacacctggagtttgacggacacttt
ggcctggaggaggctgagaatggagtgtgcaggtatgactttgttgaagtggaggatcaa
tcagagaccagtactataatctggggtcgctggtgtgggcagaaggcaccgcctagtctc
aactccaaaaccaacatgctcagagtcaccttcaagtctgacgactactttgttgcaaag
ccgggattcaaagtctactactcactgctgtatgacactcctttgcctgcgtccaacacc
aactgggaggccgtcactatgcccatgtcggacagtagtgtaggacagataccagcagca
gtcacagaagttccattctcattggaggatttggaccggaccatagctgcgtttgacact
gtagaacaacttctcagatccctgagcccagacacctggaggcaggacctggacagcatc
tacactcaaacacacatacattatagatccagggcctatcatctggcaagcagacataat
aaagttgacctgaaccgtctctatgaggacgtcaagcggtacagctgtactcctcgcaat
tactctgtgaacctgcgcgaggagctgagagccactaacgccgtcttcttccctcgatgt
ctgctggtcaaacgttgcggcggcaactgtggctgcggaaccgataactggaacaacggc
tgcacctgtcaggcctccaagacaacagtcaaactacatgaggtgctgaagtacgcccca
gaggtcactccgtatcagcgccatcggcggccaagggtgcactgggtcatagatgagatc
ttcctcacacaccatgaaaagtgcgagtgtgcgtgtccctcccagccccctcgctga
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