Larimichthys crocea (large yellow croaker): 104929908
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Entry
104929908 CDS
T04659
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104929908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104929908
03036 Chromosome and associated proteins [BR:
lco03036
]
104929908
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104929908
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104929908
PBAF complex
104929908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
104929908
NCBI-ProteinID:
XP_019111773
LinkDB
All DBs
Position
XII:complement(10110213..10119725)
Genome browser
AA seq
489 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPSTPGFVGYNPYSHLAYNNLRLGGSSGGSSRNSSGITVPKP
PKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNE
YEAEKIEYNDSLKAYHNSPAYLAYVNAKNRAEAAMEEESRQRQSRMDKGEPYMSIQPAED
PDDYDDGFSVKHTAAARFQRNHRLISDILSEIVVPDVRSVVTTARMQVLKRQVQSLMVHQ
RKLEAELLQIEDRHQDKKRRFLETTDSFNTELKRLCSQKVEVDMEKLAAEMAAAEEAARR
RAEEREREAAEQAEKAAQQAQQAQQQQQQQQAEAAGNKAAEPTGANANSAANPSSGTKEE
EKPTPMETDEAAPTEPSSDSQPAPPTPSDPPSSSSDKATPPPDPPRESSTPSSSAPSEDS
NNSMPPPSSDGPPGPAAAPDPPAAQEANSSAANPNTAAATPPPPPASEEPAPPPPPLLPS
NQSSQQYDM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgaccatcctacgcccctccccctccccccgccccgacaacacaaatgcct
tccaccccagggtttgtgggctacaacccttacagccatctggcctacaacaacctccga
ctgggagggagctccggaggctccagcaggaactcctcgggcatcaccgtcccgaagcct
cccaaacctccagacaagcctctgatgccttacatgcggtacagccggaaggtaagcagg
aaggtatgggaccaagtgaaggcgtccaaccccgacctgaagctgtgggagattggaaag
attatcggagggatgtggagggacctgactgatgaggagaaacaggactacctgaatgag
tatgaagccgagaagatcgagtataacgactctctgaaggcgtaccataactcaccagcc
tacctggcctacgtcaacgccaagaaccgagccgaggccgcgatggaggaggagagcagg
cagaggcagagtcgtatggacaaaggagagccgtacatgagcatccagcccgctgaagac
cctgatgactacgacgacggtttttccgtgaagcacacggcagccgctcgcttccagagg
aaccaccggctcatcagcgacatcctcagcgagatcgtagtgcctgacgtccgctcggtg
gtcaccacagcccgcatgcaggtcctcaagaggcaggtccagtctctcatggtgcaccag
aggaagctagaggcagaactgctgcagattgaggatcgccaccaagacaagaaaagacgc
ttcctggagaccactgactcattcaacactgaactcaagcggctgtgcagtcagaaggtg
gaggtggacatggagaagctagcagcagagatggcagccgcagaggaggcagccaggcgc
cgggcggaggagagggagcgcgaggcggccgagcaggcggagaaagctgctcagcaggcg
cagcaggctcagcagcagcaacagcagcagcaggcggaggctgctggaaacaaagcagca
gagccgactggagctaatgctaacagcgcagctaaccccagctcagggaccaaggaggag
gagaagcccacaccgatggagacagatgaggcggcgcctacggagccttcttcagactcc
cagcccgctccacctactccttctgaccccccatcttcctcctccgataaagccacacct
ccccccgacccccccagggagagcagcactcctagcagcagcgcccccagcgaggacagc
aacaacagcatgcctcctccctcctcagatggcccccctggaccagcagcagcccccgac
cctccagcagcccaggaagcaaactccagtgcggctaaccccaacacagctgctgcgaca
cccccacctcctcccgcctcagaagaaccagcccctccacctccaccactactgccctcc
aaccagagcagccaacagtatgatatgtaa
DBGET
integrated database retrieval system
