Larimichthys crocea (large yellow croaker): 104930045
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Entry
104930045 CDS
T04659
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104930045
Membrane trafficking [BR:
lco04131
]
Protein recycling
Others
Others
104930045
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
104930045
NCBI-ProteinID:
XP_027136868
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Position
I:complement(33767892..33947837)
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AA seq
1250 aa
AA seq
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MEREVIFCPKWLSALWFLILIMLCVSHAAKAEITCRSCQPGNKWRARELLLKFDTSESAT
GLKGEVFGHGEEAGRTRAAASAESRRLLRCAAGSAECAPERAGYAEPRLKRNTDNLQPQG
EIGEGEFAEMKVLKTSGGKKSGDGAGFTRRYRKRARRNSDDDDDKVRSPGSARGPKPGEG
MSSAAGRRVTRSELRWSGEERRAGPRQEELKLNSSTFALTGDSSHNQAMVHWSGQNSSVI
LMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLYVSPNNKRKIMLLTD
PEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQL
VHERVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCTDSNKGKPFPGYIDP
NSLVVQDEYVFVQVSTAGRPIYYVSAKRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQ
EWNQNETYNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLANKKTDNQ
VKTHITYNRGRDWRLLQAPSKDLRAGNIHCVLPYCSLHLHLHVSANPYTSGNIASRDSAP
GIIVASGSIGAELTTSNVSVFITSDAGNTWRQIFDEEYAVLYLDQGGALVAIRHTPLPIR
HLWLSFDEGRQWNKYSFTNTPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSI
FNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTYSVSMTSGPCDCTEAD
FECDYGYERRTNGKCTTAFWFHPSSMSRSCTTGMTFLNSTGYRKVVSNNCTAGVSVEYTA
RRQQCPIQAPRGLHLVTSEGTLTATLGTNVTFLVFLEEGDGARTSITLDFGDGHALTYSN
VSSIEEGIKHIYKAVGIYRVTAIGENSLGSETVVLYLHVTCQLEYIHLSAPFVAVRNKEV
NLTAVLWPSQVGTVTYIWWIGNNTEPVITLEGSVACTFSREGISTVTVQVSAGNTILQDR
KNIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIKNSLIQATGVREDQLLVTVLPG
LPTAAEFFLLPDKQLTEGKPEKSSAHLDQLSEVLLSTLNQNLVQFTLRPGVQVTVYAAHL
SAAPLVDTSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLNVYAQMQNEKEQEMMSP
ANPTEATPSSQRDLVHSLEILDTEFNSRPIGCMKPHVHVKFSTELPTYIV
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaggtcatattttgtccaaagtggctcagcgcgctttggtttttgattttg
atcatgctctgtgtctctcacgccgccaaagctgagataacttgccggtcatgccagcct
ggaaataagtggcgtgcacgggaattactgctgaaattcgacacaagtgaatccgcaaca
ggattaaagggagaagtttttggacacggagaagaggcagggagaaccagggcggctgca
agtgccgaaagtcgtcggctcctccgttgcgcagcggggtccgctgaatgcgcaccagag
cgggcgggatacgcggagccaaggctgaaacggaatacagacaacctgcagccacagggc
gagattggtgagggagagtttgcagagatgaaagttttgaaaacgagtggtggaaagaag
agcggcgacggtgcaggttttaccagaaggtacagaaagcgcgccagacggaacagtgat
gatgatgatgataaagtcagatcccccggttcagcccggggtccaaaaccgggagagggc
atgagctcggcagctggacgcagagtgacgcgctctgaattacgctggagcggagaggag
cggagagccggtccgagacaagaggagctaaaacttaatagttcaacgttcgccttaacg
ggggattcatcccataaccaggctatggtgcactggtccggccagaacagcagtgtgatt
ttgatgctgaccaaactattcgacttcaacctcaacagtgtgaccgagagttcattatgg
aggtcaactgactacggagcaacgtaccagaagctgaatgacaaagtaggagcaaagacg
atcctcagttatttgtacgtgagccccaacaacaagagaaagatcatgctgctgactgac
ccagaggtggagagcagtctgctgatcagctctgatgaaggagccacctaccagaagtac
cggctgaacttctacatcctaagccttctcttccaccccgagcaggaggactggattctg
gcctacagccacgaccaaaagctctacagctcggtggagtttgggaggaggtggcaactg
gtacacgagagagtggctcccaatcgtttctactggtcgaaaatgggtttggacaaagag
ccgggcttaattcacctggaaaccagcatctctgaaggacaggccctgtatgtcacctgc
aagctgcagaactgcacagattccaacaagggcaaaccattcccgggctacattgacccc
aattctctggtggtgcaagatgagtatgtgtttgtccaggtgtcaaccgcggggaggcca
atctactacgtgtctgctaaaagagatgtcttcacacccatgaagctgcctaagtacacc
ctgcccaaggacctgcatgtgatcagtacagatgaaaaccgtgtggttgcagccgtgcag
gagtggaaccagaatgaaacctacaacctgtatgtgtcggacacgtcgggggtctattac
actctggcattggagaacgtggtcagcagcatgggccccgagggcaacgtcatggtcgac
ctctacgaggtagcgggaataaagggaatgttcctcgccaacaaaaagacggataatcaa
gtgaagactcacatcacctacaacagaggcagagactggaggttactgcaggccccgagc
aaagacctaagggctggcaacattcactgcgtgctgccatactgttcattacatctccac
cttcatgtgtctgcaaacccctacacgtctggaaatatagccagcagggattcagcgcca
gggatcatcgtcgcatcaggctccattggtgcagagctgaccaccagcaacgtcagtgtg
tttatcacctcggacgcaggaaacacatggagacagatctttgacgaggagtatgcggtg
ctgtatctcgaccaaggaggagccttagtcgcaataagacacactccgcttccgatccga
cacctgtggttgagcttcgacgaaggacgccagtggaacaagtacagcttcaccaacaca
cctctgttcgtggacggggtgctgggcgaacccggggaggagactctcatcatgacgata
ttcggccacgtcagtcatcgctcggagtggcagctggtgaaaatagacttcaggtccatc
ttcaacaggaggtgcacagaggcggattatcagacgtggcatctccacaaccagggcgag
ccatgcctcatgggagtgaagcgaatctaccggaagctgaaacccacgtccaggtgcgtt
atggggaagacgtactcagtttcgatgacatcgggaccctgcgactgtacggaggccgac
tttgagtgtgattatggctatgagagacggaccaacggcaagtgcaccaccgccttttgg
ttccatccatcatcgatgtccagaagttgcaccacggggatgacgttccttaacagcact
ggctacagaaaagtggtctctaataactgtacagctggggtcagcgtggagtacacagcc
aggaggcagcagtgtcccatccaagcacccagaggtctccacctggtcaccagcgagggc
acgctgacagccacactgggcaccaatgtcaccttccttgtttttctggaggagggcgac
ggggcgaggacaagcatcacgctggactttggagacggccacgctctgacctactccaat
gtgagctccatcgaggaggggatcaaacacatctacaaagccgtggggatctaccgggtg
accgccattggggagaacagtctcggctcggagaccgtcgtgctctacctgcatgtaaca
tgtcagctggagtatatccatctctcagctccctttgtggcggtgaggaataaggaagtg
aacttgactgctgttctgtggcccagccaagtgggaacggtcacctacatctggtggatc
ggaaataacactgagccagtaatcaccctggagggaagcgtggcatgcacgttctcccgg
gaaggcatcagtacagtcactgtgcaggtgtctgcagggaataccattctgcaggacaga
aaaaacatcgctgtccacgaatatttccgatctcatctgctcgctttttcatcaaacctg
gatgaccacaaccctgatgtggcagaatggaggctggatgtgagccgagtcatcaagaac
tctctgatccaggccacaggcgtgagagaggatcagctcctggtcaccgtcctccctggt
ttacccacggcggcagagtttttccttctgcccgacaaacagttaaccgaggggaaacca
gagaagagctctgctcatttagatcaactctctgaggtcttactcagcaccttaaatcaa
aacctcgtccagttcacgttgcggccaggggtccaagtcaccgtgtatgcagctcaccta
tcagcagcgcccctagtggacaccagcgagaaccacagtggctctgccatgctaatgctg
ctatcagtagtggttgtgggtttagctgtatttgtcatctacaaattcaagaggaagatc
ccaggcctcaacgtctatgcgcagatgcagaacgaaaaagaacaagaaatgatgagtcca
gctaatccaacagaggccacgcccagctcacagcgggacttggtgcattctttggagatt
ctggacaccgagtttaactcacggcccatcggatgtatgaaacctcatgtacatgtgaaa
ttctccacagaactccccacgtacatcgtctaa
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