Larimichthys crocea (large yellow croaker): 104930079
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Entry
104930079 CDS
T04659
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104930079
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
104930079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
Plasmod_Pvs28
Trypan_PARP
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
104930079
NCBI-ProteinID:
XP_027136571
LinkDB
All DBs
Position
VII:complement(28767373..28795467)
Genome browser
AA seq
2162 aa
AA seq
DB search
MLQPRLLLSSLFIVFFSPLPAPADGQTANAAGGGGGGVDRIQVMFTPTICKMRCSQERCV
KYCERGNMTTLYSSNEGDAAARTDVSHGPGFRVFLCPLLCKNGGVCLQKDRCLCPPNFTG
KFCQIPVAANAVAAAAPPSSTNEIVKPALPSTNQDLTQSEFLLPLGLDQEAARSGGGASG
PSMVKVRVQHPPEASVKIHQVLKVSGFSPTLRTLSSSSSSGSAGAPAPGGGPVQAQTLRG
DGTYNQQAGFKYCFREVKDRQCSSPLPGLRSWEMCCRGLGKAWGITDCVLCPDTGQNNSS
CPVGFERSNGAQCADVNECLLPGLCENGICVNTRGSYSCVCRAGFLLDASHGICISQSVI
SEEKSQCYRVLGSGQGPSSCSLPILRNITKQICCCSRVGKAWGPNCQRCPYFGSVAFKEI
CPAGPGYHYSASALQFNQRVTEQLGNQGASLVPHGNQDNQGAGTSSSSGASRSQDKPSSS
GATAGGASTSGVGSSTGSAGTHTRPSPPQPVPRPQPQPVPRPQPQPVPRPQPQPVPRPQP
QPVPRPQPQPVPRPQPQPVPRPQPQPVPQPVPRPQPQPVPRPQPQPQPQLPPQPQPRPQP
PSQPRPQPPSRPDSPSSRPVHPGSTGTTVTQDKPQTTGRHGTQQNQLDLAPAHPRPQPPS
TGTQAAGRSSPVPPRPDPPPARGDTLPSPAQPQTPERGSRPSSRPPVSPTTRVQTVRGVC
ETRPGVCGRGRCVDQPGGRHICVCDQGYQPNTQRTYCQDVNECAQSPGVCPVGECVNSMG
SYRCVCPSGYRSSSQQTGCQDIDECQQNPCSNGRCDNTPGSYRCVCRLGYRVSGNTCTDV
DECEDPLQCPGQECINSQGSYRCVSCQPGYRLSNRLCTDIDECRQAPCTNARCENTPGSY
RCVCRHGYKLQNNTCTDVDECAEPSQCPGQMCVNTVGSYRCMSCRPGYTLVNRQCADVNE
CEDREVCRGQQCVNTDGSYSCVDCEQGYQSVNRVCADVDECVQPSQCPGQQCVNTVGSYR
CVSCQPGYSSQDGSCKDIDECASAGACEAKRVCVNTVGSFRCDCRPGYRAPSLGRQCRDI
NECLEGDFCFPRGECVNTAGSYTCVCAQGFKLSLNQTACLDVDECVKPGVCADGRCVNTE
GSFQCQCQTGFTTNPERTACLDVDECVSSGGSVCGSQCCENTIGSYRCLASCEPVYRESP
SRSGEDVDECANSTICGEHATCQNLIGRYLCVCHQGFTSTADGKACEDEDECVSMPGVCG
SARCENVEGSFMCECDRRGDEFDPSIRRCVNTARQGGALDSSSSHVSVGESPPVMPPLPA
ARPGELRECYYNLAERGTCSLLATNTSQQECCCTVGEGWGLGCQYHTCPATYTAEFQSLC
PSGRGYVTTGPGAFSYTDVDECKRFHPEVCKNGVCVNNIPGYNCYCSSGYVYNSTLLECV
DHDECEEESCVGGVCVNTVGSYYCSCQHPLVLDDTQRNCVNSSHLTVGKTPPPHLHLHSP
SPSFFPFMVPPSLSPSFPHLFIYSLMSMSASVRRPVCGSQCCENTIGSYRCLASCEPVSG
APSRSGEDVDECANSTICGEHATCQNLIGRYLCVCHQGCTSTADGKACEGGALDSSSSHF
SVGESPPVMPPLPAARPGELRECYYNLAERGTCSLLATNTASRSARTVGEGWGLGCQYHT
CPPHTQPSFSLCVPAGEDMSPPDQEPSATQRCVKNGVCVNNIPGYNGYCSSGYSNNSSAG
VCRTSRRVRGGGCVGGVCVNTVGSYYCSCQHPLVLDDTQRNCVNSSHLTVDENMSLCWQH
ITADLVCQSPLVGPRFTFMDCCCLYGEGWGLQCALCPSTDSDDYATLCSSFLRPAYPGTF
PDSSASGRGGGGVVGGGGGGGGDESMSVCWQHITADLVCQSPLAGPQFTFMDCCCMHGEG
WGLQCLLCPSADSDDYATLCSSGGPPYFPPYTSESFPDDYSPAGDDRSGFRGRGPVTFSL
PDASPPRSPSFRLPPDPRAERAFGARPLPPSRPYDGPLTLPGAPYLDQEEEEEEEVAFRP
GPPFPPFTERSRGGGGGAPRRVYERRYESYAGLSTAEDCGILHGCENGRCIRVAEGYTCD
CYQGYGLDMTSMTCIDKNECEDGVGVEYPCVNARCVNTEGSFRCVCRRGYVMSRRPNHCV
AA
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcctcggctccttctgtcgtccctcttcatcgtcttcttctctcctctgcca
gcgccagctgatggacagacagccaacgctgctggaggtggaggagggggcgtggacagg
atccaggtgatgttcacgccgaccatctgtaagatgcgctgcagccaggagcgatgtgtg
aagtactgcgagcgaggcaacatgaccacgctgtacagcagcaacgaaggagacgcagca
gcaaggacagacgtctcccacggaccgggcttcagagtcttcctctgtcctctgctctgt
aagaatggaggcgtctgcctgcagaaggatcgctgcctctgcccgccaaacttcacaggg
aagttctgccagatccccgtcgctgccaacgccgtagccgcggccgccccgccctcctcc
accaatgagatcgtcaagcctgcgctgccctcgaccaatcaggatctgacccaatccgag
ttcctcctaccgttgggactggaccaggaggcggcgaggtctggaggtggagcctccggt
ccgtccatggtgaaggtgcgagtgcagcacccccctgaggccagcgtgaagatccaccag
gtgctgaaggtgtctggattcagtcccaccctgcggacgctctcttcctcctcgtcctcg
gggtcggcgggagctccggctccaggaggtggaccggtccaagcgcagacgctcagaggg
gacggcacgtacaaccagcaggctgggttcaagtactgcttcagagaggtcaaagacaga
cagtgcagctctccattgcctggtctgaggagttgggaaatgtgctgcagaggacttggg
aaggcgtggggcatcaccgactgtgtcctctgtccggacacaggtcaaaacaacagcagc
tgtcctgtcggatttgaacgatccaatggggctcagtgtgccgatgttaatgagtgcctc
ctgcctgggctgtgtgagaatgggatctgtgtgaacaccagggggagctatagctgtgtt
tgtagggcggggttcctccttgatgcctcacatggaatctgcatctcccagagtgtgata
tcagaagagaagagtcagtgttaccgggttctgggttcgggtcagggtccatcctcttgc
tctctacccatcctgaggaacatcaccaagcagatctgctgctgcagccgagtaggcaaa
gcctggggacccaactgccagagatgtccgtactttggttcagtggcctttaaggagatc
tgtccagccggacccggttatcactactccgcttcagccctgcagttcaaccagagagtc
accgagcagctcgggaaccaaggagcttcgctggtaccccacggaaaccaggataaccag
ggtgctggtacttccagtagcagcggagcctccaggtctcaggataagccctcttcctct
ggtgcgactgctggtggagcgagtacttcaggggtcggatccagtacaggatcagctggt
acccacactagacccagtccaccccagcccgtaccacgacctcagccccagcctgtaccc
cggcctcagccccagcctgtaccccggcctcagcctcagcctgtaccccgacctcagccc
cagcctgtaccacggcctcagcctcagcctgtaccccgacctcagcctcagcctgtaccc
cggcctcagccccagcctgtaccccagcctgtaccccgacctcagccccagcctgtacca
cgacctcagccccagccccagccccagcttccacctcaaccccagccacgaccccagcct
ccgtctcagcctcgacctcagcctccgtctcgtccagactctccttcctccaggcctgtt
cacccgggaagcactggcaccacagtcacccaagacaaaccccagactacaggcagacac
ggaacccaacagaaccagcttgaccttgctcctgcacatccaagaccacaacctccgtcc
accgggactcaagcagccggtcggtcctcccctgtgcctccccggcccgatccaccacca
gctagaggggacactctcccatctccggcccagccgcagactcctgagcgtgggtcgagg
cccagcagcagaccacctgtgagcccgacgacccgagtccagacagtgcgaggtgtgtgt
gagaccagaccaggtgtgtgtgggcgtggccgctgtgtggatcagccaggtggaagacac
atctgtgtgtgtgatcaaggataccagcccaacactcagcgcacgtactgccaagacgtg
aacgagtgtgcgcagtctccaggtgtgtgtccggtgggggagtgtgtgaactcgatgggc
agctacaggtgtgtgtgtccgtctggatacaggagcagcagccagcagaccggttgtcaa
gacatcgacgagtgtcagcagaatccctgcagcaacggtcgctgtgacaacacgccgggc
agctacaggtgtgtgtgtcgcctcggttacagagtcagcgggaacacctgcacagatgtg
gacgagtgcgaggaccccctgcagtgtccaggtcaggagtgtatcaacagtcagggctcg
taccgctgcgtctcctgtcagcctggatacagactgtccaacaggctctgcacagacatc
gacgagtgccgccaggcgccctgcaccaacgctcgctgtgaaaacacacctggaagctac
cgctgtgtctgtcgccatggttacaagctccagaacaacacctgcacagatgtagacgag
tgtgcggagccgtctcagtgtcccggtcagatgtgtgtgaacactgtgggatcgtaccgc
tgcatgtcgtgtcgaccaggatacacactcgtcaacagacagtgtgcagatgtgaacgag
tgtgaggaccgcgaggtttgtcggggtcagcagtgtgtgaacacggacgggtcgtacagc
tgtgtggactgtgagcagggataccagagtgtgaacagagtgtgtgcagatgtggacgag
tgtgttcagccctctcagtgtcccggtcagcagtgtgtgaacactgtgggttcatatcgg
tgtgtgtcgtgtcagcccggatacagcagccaggacggctcctgtaaagatattgatgag
tgtgcgagcgccggggcgtgcgaggccaagcgtgtgtgtgtgaacacggtcggctcgttc
aggtgtgactgtcgtcccggataccgagcgccgagtctggggaggcagtgcagagacatt
aacgagtgtttggagggagatttctgtttcccccgaggagagtgtgtgaacacggccggg
tcgtacacgtgtgtgtgtgctcaggggttcaaactgagcctcaaccagacagcctgcctc
gatgtggacgagtgtgtgaagcccggtgtgtgtgcggacggtcgctgtgtgaacactgaa
ggatcgtttcagtgccaatgtcagaccggcttcaccaccaacccagagaggaccgcctgc
ctcgatgtcgatgagtgcgtctcgtccggcggctcagtctgcggctcgcagtgctgcgag
aacacgattggttcataccgctgtctcgcttcctgcgagccggtctatcgggagtcgcct
tcccgcagcggtgaggacgttgacgaatgtgccaactcgacgatctgcggggaacacgcc
acctgtcagaacctgataggaaggtacctgtgcgtgtgccaccagggcttcacctccacc
gccgacgggaaggcctgtgaggacgaggatgagtgtgtgtctatgcctggtgtgtgcggt
tctgcacgttgtgagaatgttgagggttcgttcatgtgtgagtgtgaccggcgtggagac
gagttcgacccgagcatcaggcggtgtgtcaacacggcacgacaaggaggagctctggac
tcctcctcctcccacgtcagtgtgggggagtcacctcccgtgatgcctcccctccctgcg
gctcgtccaggtgagctgagggagtgttactacaacctggctgagcggggcacctgcagc
ctgctggccaccaacaccagccagcaggagtgctgctgcacggtgggggagggctggggg
ctgggctgccagtaccacacctgccccgccacatacacagccgagtttcagtctctgtgt
cccagcgggagaggatatgtcaccaccggaccaggagccttcagctacacagatgtggat
gagtgtaagcgtttccatccagaggtgtgtaagaacggagtgtgtgtcaacaacatcccc
ggatacaactgctactgctccagtggatacgtctacaacagcacgctgctggagtgtgtc
gatcacgacgagtgcgaggaggagagttgcgtgggcggagtttgcgtcaacacggtgggt
tcgtattactgcagctgtcaacatcctctggtcctcgacgacacgcaacgcaactgtgtc
aactcgtctcacctcaccgtgggtaagacgcctccacctcacctccaccttcactcacct
tctccctcgttcttcccattcatggtccctccttctctcagtcccagttttcctcatctg
ttcatttattcattaatgtcgatgagtgcgtccgtccggcggccagtctgcggctcgcag
tgctgcgagaacacgattggttcataccgctgtctcgcttcctgcgagccggtctcggga
gcgccttcccgcagcggtgaggacgttgacgaatgtgccaactcgacgatctgcggagaa
cacgccacctgtcagaacctgataggaaggtacctgtgcgtgtgccaccagggctgcacc
tccaccgccgacgggaaggcctgtgagggaggagctctggactcctcctcctcccacttc
agtgtgggggagtcacctcccgtgatgcctcccctccctgcggctcgtccaggtgagctg
agggagtgttactacaacctggctgagcggggcacctgcagcctgctggccaccaacaca
gccagcaggagtgcgcgcacggtgggggagggctgggggctgggctgccagtaccacacc
tgcccgccacatacacagccgagtttcagtctctgtgtcccagcgggagaggatatgtca
ccaccggaccaggagccttcagctacacagaggtgtgtaaagaacggagtgtgtgtcaac
aacatccccggatacaacggctactgctccagtggatactctaacaacagcagtgctgga
gtgtgtcgtacatcacgacgagtgcgaggaggaggttgcgtgggcggagtttgcgtcaac
acggtgggttcgtattactgcagctgtcaacaccctctggtcctcgacgacacgcaacgc
aactgtgtcaactcgtctcacctcaccgtggatgagaacatgtccctctgctggcagcac
atcaccgcagacctggtctgtcagagtcctctggtgggacctcggttcaccttcatggac
tgctgctgcctgtacggggagggctgggggttgcagtgtgccctctgtccgtccaccgac
tccgacgactacgccactctgtgcagctcatttcttcgtcctgcgtatccggggactttt
ccggactcttctgcatctggacgaggaggaggaggagtagtaggaggaggaggaggagga
ggaggagatgagagcatgtccgtctgctggcagcacatcaccgcagacctggtctgtcag
agtcctctggcaggacctcagttcaccttcatggactgctgctgcatgcacggggagggc
tgggggctgcagtgcctcctctgtccgtccgccgactccgacgactacgccactctgtgc
agctcaggaggtcctccatacttccctccctacacttcggagtccttccctgacgattac
tctccagcaggagacgacaggtccggcttcagagggaggggcccagtcaccttcagcctg
ccggacgcctcccctcccaggtctccgtccttccgcctccctccagacccccgggctgag
agggcgttcggagcccggcctcttcctccatcacggccttacgatggtcctctcaccctg
cccggcgctccttacctggaccaggaggaagaggaagaggaggaagtggcgttcaggccg
ggtccgcccttccctccgttcactgagaggagcagaggtggaggtggaggagcaccgagg
agggtgtatgagaggcgctacgagtcctacgccggcctgagcacagcagaggattgtggg
atactgcacggctgtgagaatggaaggtgtattcgtgtcgccgagggttacacctgtgac
tgttaccaaggatacggactggacatgacctccatgacgtgtatagataaaaacgagtgt
gaggacggcgtcggtgtggagtacccgtgtgtgaacgctcgctgcgtgaacaccgaaggc
tcgttccgctgcgtctgcaggagaggatacgtgatgtcacgcagaccgaaccattgtgtg
gctgcgtag
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