Larimichthys crocea (large yellow croaker): 104930091
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Entry
104930091 CDS
T04659
Symbol
kars
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104930091 (kars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lco01007
]
104930091 (kars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104930091 (kars)
Enzymes [BR:
lco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
104930091 (kars)
Amino acid related enzymes [BR:
lco01007
]
Aminoacyl-tRNA synthetase
Class II (A)
104930091 (kars)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104930091 (kars)
Prokaryotic type
Other AARSs
104930091 (kars)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
104930091
NCBI-ProteinID:
XP_010743083
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All DBs
Position
VIII:13356332..13363642
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AA seq
613 aa
AA seq
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MLCLVRAARRQLCQAFEIRGQWLKCAPPCAAAAAAAPAQIYSNRWKGGKSELKRRMKAEK
KAAEKEAKVKELVEQKKESNDQGAQNACALDEETLDPNQYFKIRSQAVQELKGTAEDPYP
HKYHVDLSLTDFIEKYNHLEPGDQLTDVVLNVTGRVHAKRASGAKLIFYDLRGEGAKLQV
MANSRNYKSEEEFVAINNKLRRGDIIGVRGNPGKTKKGELSIIPIELTLLSPCLHMLPHL
HFGLKDKETRFRQRYLDLILNDYVRQKFITRSKIITYLRSFLDQLGFLEIETPMMNIIPG
GAVARPFVTYHNELDMNLYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFT
TCEFYMAYADYHDLMEITEKLLSGMVKHITGGYKVTYHPDGPEGQAYEIDFTPPFRRVSM
THDLEKIMGVKFPPTDSYDSAETRKFFDQLCAQKGVECPPPRTTARLLDKLVGDFLEVTC
INPTFICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEVCNAYTELNDPIRQRELFEQQA
KAKAEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTNSNNIKEVLLFPAMKPD
DNKTPAHTEGTSV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtctggtcagagcagccaggcggcagctttgccaagcctttgagatcagggga
cagtggttaaaatgtgcacccccgtgtgcagctgctgctgctgctgccccagctcaaatt
tacagcaaccgttggaaaggtggcaaaagtgagctgaaaagacgaatgaaagctgagaag
aaggcggcagagaaagaagccaaggtcaaagagctggtggagcaaaagaaggaatccaat
gaccagggagcccaaaatgcctgtgccttggatgaggagacacttgacccaaatcaatac
ttcaagatccgctcccaggccgtccaggagctgaagggcacagctgaggacccgtaccca
cacaagtatcacgtagacctgtccctcacagatttcattgagaaatacaatcatttagag
cctggagaccagctgactgacgttgtcctcaatgtgacaggccgcgttcatgccaagagg
gcttcgggtgccaagctgattttctatgacctgcgaggtgaaggcgccaagttgcaagtt
atggcgaactcgaggaactacaagtcagaggaggaatttgtggccatcaacaacaagctg
cgccgaggagatatcattggtgtccgtggtaacccggggaagaccaaaaaaggggagttg
agcatcattcccattgagctgaccctactgtcaccatgtttgcacatgttgccccacctc
cactttggcctcaaagacaaggaaacacggttccgccagcgttacttggatctaattctc
aatgactacgtgaggcagaagtttataactcgctccaaaatcatcacatacctacgcagc
ttcctggaccagctgggatttttggagattgagacaccaatgatgaacattattcctggt
ggcgcagtggcccgtccatttgttacttaccacaatgagctggacatgaacctgtacatg
aggatcgcgcctgagctttaccacaagatgcttgtggtcggtggaatggacagagtgtat
gagattggtcgtcaattcaggaacgaaggcatcgatctcactcataatccagagttcacc
acctgtgaattctatatggcgtatgcagattaccatgacttgatggagatcacagagaaa
ctactctcaggaatggtgaagcacatcactggaggatacaaggtgacttaccaccctgat
ggtccggagggacaggcctatgagatcgacttcactccaccatttagaagagtgagcatg
acacacgatctggagaagattatgggagtcaaattccctccaacagacagctacgatagt
gctgagacacgtaaattctttgaccagctgtgtgcacagaaaggagttgaatgtcctcca
cccagaaccactgcccgcctccttgacaagttggttggagatttccttgaggtcacctgt
atcaaccccacattcatctgtgatcaccctcaaatcatgagtcccttagcaaaatggcac
agatcagagaaaggcctaacggagcgttttgagctctttgtgatgaagaaggaagtctgc
aacgcttacactgagttgaacgatccaattagacagagggagcttttcgagcagcaagcc
aaggccaaagctgaaggtgatgatgaagccatgttcatcgatgagaccttctgcacagca
ctagaatacggactgccgccaactgccggctggggcatgggcatcgatcgtctcaccatg
ttcctcacgaactccaacaacatcaaggaggtgttgctgtttcctgccatgaagcctgac
gacaataagacaccagcgcatactgagggcacctccgtctaa
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