Larimichthys crocea (large yellow croaker): 104930107
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Entry
104930107 CDS
T04659
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104930107
04091 Lectins [BR:
lco04091
]
104930107
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104930107
Lectins [BR:
lco04091
]
C-Type lectins
Others
104930107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
Ion_trans
GPS
REJ
SUEL_Lectin
SAGA-Tad1
AtuA_ferredoxin
Motif
Other DBs
NCBI-GeneID:
104930107
NCBI-ProteinID:
XP_027137142
LinkDB
All DBs
Position
VIII:13302519..13319040
Genome browser
AA seq
2308 aa
AA seq
DB search
MESATFPTLTLMVLLLSWVCYADEDTEALSCPDYQEGFDGSCYEFVALQRSFLSAQGWCE
RGGGHLAFILNDETQQFLQKHLQPGKDWWLGLAPAAPNLTLDSAATEGSLAWLDGSDVSY
SNWVNMPDVQAACGHILRHSGFQWEATENCSQELNFICQFEFGRSIACDGQNATLQCGSG
QVIEIDDSFYGRKTIHYCRSKLTASPSSTQEECSWIDVMDSVTAHCHGLQACQAPADQSS
FGEPCPVLGSYLSVEYHCKHGLHLLMSKLAAVFDNVTITVKWLLHPFEGNLTCTVNAGDG
HTIDPYSPAEMESTMMHKFSRPGVFMVGVECTTSDWHVTAQKAITIQEPIREFTVIKCYS
RNMSTGGTKCNALHHRPVQIQVMVEAGTNVSYTIQHEGHLVANLSVDRGITPHNMTLSVE
VVENLGHGCHNLTLTASNKVTAQKVSTDLELCLLEPVEGLQASVIAEEDGCPNSTDLNIS
VSLERGAPVELLFTLTGARDSLSETRNMFSGSLQAYTFSNPLEGLLQVKVQAMNAFSSFD
VDVDLESVLQACQSYSEQSPDEHEVSEDLEKCYSRAGRRPLIEKQDGNTEYVVHSQHLKV
SRDTFHNISVIAYGKEEPGFVKYTLPVPGPEPTNPAATDAPTSPSPPSCKHLRCSNAHEV
KSVFLPLGDKSNNYTLSVVVTVKNEFEKATTIVSTQVLKSSSSTSVEALQSAVQDSLSQL
EQQGLLSGVSLGQIFTSVSDMLNAEAGQDQKDARTKLREQMLTKMTTVLLDSPSNTTQEV
QVTARAVAGLTQSPDELSPAAQEEAGSLLVDLSSSLNTISANQSSRDDGEVVQAATPIVE
AASNILNVSSSVSPQKKVSDFLLTGINNVQSALLTNKKLNGDPAIIDSGQISVYVNRVSP
EKIQMQDINVQKNTSSRFSFPTLPAHIVSPGEPVDVRMMSFETNPYSWKEENITGTVGSV
SLTRVNGTVIHVENLPEEIEILLPRLDIGQGNSTVLDLANFSTLIIDIPSPDVTLVLKME
PSEDISFMLFLEYKDYPDDKNHVAKTRIPKENSTEEEKYTWVLSPKDRTGDIGVHYLVMK
PIVEPGVKSINATVTVISIAAQCKYWKETESSWSEDGCRVGPLTTPLVTQCLCNHLTFFG
SSFFVMPNLVDVSRTAELFATFTNNPVVVCFVGAIFTAYLLVVVWARRKDIQDSAKVKIT
VLEDNDPLAEYRYMLNFNTGHRHGASTSSQVTITLLGTEGESEPHHLTDPEKPVFERGGV
DMFLLTTHFSLGDLQSIRLWHDNSGAHPAWYVNKVMVQDLETGQKWHFLCNSWLAVDVGE
CTLDKVFPVATEMDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPCSTFTRVQRVSCCFSL
LLCTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNTR
PRDKATKTDASKQGKTVRVSPSQTSSPQKELKDITPDTVIKDIKKIAQSLSKAMKSPLPD
LELRPGQQADINTLLSLVEDIIRQQNRVAGDFYTDASKRDCSMILSLRAVNLQENSVWGS
PEKTSDEVQKKSNNRRYLYRQLRHVEKELGLLGPYRFPNPDSYNRAMEQVQGMKGLLEYH
LPSSSLEGDQLDGSPSPEESINGDTAKKRHQGGLPWWFVFVGWILVIATSCVSGYFTMLY
GLTYGKDRSISWLISMVVSFFESLFITQPLKVLGFAAFFALVLKKVDQEEYGEPQIDESL
RNTNDPDTVRAARRDSTCSFYQPPPPTDIERMRNNMIKEQKVFALMREILTYMGFMWMLL
LVAYGQRDPNAYFLTQHIRQSFSREISDSMSIQDVFNWANTTLLSNLFGEYPGFITDGNS
KLVGNARLRQVRVRNNSCYVAPSMQQSERDCHAPYSWDLENMGSYGPGWSHFEGDNASLN
VHSPWTYQSQGKLRAYPIWGSVTLYRGGGFVVDLGPDLQNSSRTLQYLFDNTWFDVYTQA
VFVEFTVYNANVNLFCIVTLMLETTAIGAFQFRSELQSVRLYQSTGGLHIFVMASEAIYF
LFIVYYMFVQGKLMKQQKWAYFKIKWNLLELAIIILSWSALSVFIKRTLLGKRDIEYYQN
HKDQYASFHETAKADAVLGYLIAFLVLLATIKLWHLLRLNPKLHMITATLQRAWTDISGF
LVVMTIMFLAYSIASNLMYGWKLYSYRTLLDAAQTMISLQLGIFNYEEVLNYNPVLGAFL
IGSCIVFMTFVVLNLFISVILVAFSQEQIHHKPSEEDEIVDLMLMKLCSLFGLKCKKQGG
DCPAEKPVVSSASNNGLSMISPGNIHEG
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgccacttttcccacactgactttgatggttctcctcctcagctgggtttgt
tatgctgacgaggatacagaggctctctcctgcccagactaccaggaaggtttcgacggc
tcctgctacgagtttgtggctctgcagcgatcctttctcagcgcccaaggatggtgtgag
cgaggtggagggcacctggccttcatcctgaatgatgaaacacaacagttccttcagaag
cacctgcagccggggaaggactggtggcttgggctggcacctgcggctccaaacctcaca
ctcgactctgctgccactgaaggttcccttgcgtggctggatggctcagatgtaagctat
agtaactgggtaaacatgccagatgtacaagcagcctgtggacatatcctgagacattca
ggctttcagtgggaagccacagagaactgtagccaggagctcaactttatttgccagttt
gaatttgggagatctatcgcatgcgatggccaaaatgcaacactgcaatgtggttctggt
caagttatagagatagatgacagcttctatggtcgaaaaacaattcactactgccgatcc
aagctcacagcctcgccctcatccacacaggaggagtgcagctggatagatgtgatggac
tctgtaacagcccattgtcacggactgcaggcttgccaggctccggcggatcagagctct
tttggtgaaccatgtcctgtgctgggaagttacctgtctgtagagtaccactgcaaacat
ggactccacctgttgatgagcaagctggcggccgtctttgataatgtcaccatcactgtg
aagtggcttcttcatccttttgagggaaatctcacatgtaccgtgaatgctggagatggc
cacactattgatccatacagcccagcagagatggagagcactatgatgcataaattcagc
cgtcctggcgttttcatggttggagtggagtgcacaaccagtgactggcatgtcacagct
cagaaagccataaccattcaggagcccatcagagagtttactgtcattaagtgctatagc
aggaatatgtcaacaggtggcactaaatgcaatgcactccatcataggcctgttcagatc
caagttatggtagaggcaggtacaaatgtttcctacacaattcaacatgaaggccatttg
gttgcaaacttatccgtggacagagggatcacaccccataacatgacgctaagtgtagaa
gtggtggagaatcttggacatggctgccacaacttgactctaactgcctctaacaaagtc
acagcccaaaaagtgtccactgatctggagctgtgtctgctggagcctgtcgaaggcctg
caggcctctgtgatagcagaggaggacggttgtcccaactctactgacctcaacattagt
gtgtcattggagcgaggagcccctgtggagttgctctttactcttactggagccagggac
tctctctcagagactagaaacatgttcagtggtagcttacaagcttatacgttctccaac
ccacttgaaggattgttgcaggtgaaggtgcaagccatgaatgccttctccagctttgat
gtggatgtggacttagagagcgtacttcaggcatgccagagttactctgaacaatcacca
gatgaacatgaagtctcagaagacctcgagaaatgttactccagagcaggaagaaggcca
cttattgagaagcaggatggaaacactgaatatgttgtccacagtcaacatctgaaagtt
tcaagggacacgtttcacaacatcagtgtgattgcttatggcaaggaggagccaggtttt
gtcaaatacactttaccagtaccagggccggagccaactaacccagctgcaactgatgcc
cctacaagccccagcccaccctcatgcaaacatctgcgctgcagtaacgcacatgaggtg
aaatctgtcttcctgcctctcggagataagagcaacaattacactttgtctgttgtggtg
actgtaaaaaatgaatttgagaaagccaccacaattgtatccactcaggtgctgaaaagc
agctccagcacctctgtggaggctctccaatctgcagtgcaggatagtctaagtcagtta
gagcagcagggtctgctctctggtgtgtctctcggacaaatattcacttcagtatctgat
atgctgaatgcagaggccggccaggatcagaaagatgcaaggacgaagctcagagagcaa
atgttgaccaaaatgaccacagtcctgctagactcacccagcaacacaactcaggaagtg
caagtgacagccagagctgtggctggactcactcagagcccagatgagctcagtccagct
gcacaagaagaagctggttcattgttggtagacctcagctcctccctcaacactatcagt
gctaatcagagcagcagagatgatggagaagttgtgcaagcagctacaccaatagttgaa
gcagccagtaatatcttgaatgtttcatcaagtgtaagtcctcagaaaaaagtctcagat
tttctgctcactgggataaacaatgttcaaagtgctttgctgacaaacaaaaagctgaat
ggagacccagccatcatcgattctggtcagatcagtgtgtatgtcaacagagtgtctcca
gaaaagatacaaatgcaggatataaatgtccagaaaaacacctcctccagattttccttc
cccacactgccggctcatatcgtctctccaggggagccggtggatgtcagaatgatgagt
tttgagacaaatccatattcttggaaagaggaaaacatcacaggaacagtaggatccgtc
tctctcaccagagtgaacggcaccgtcatccatgtagagaacttacctgaagagatagag
attctcttaccaaggcttgacatcgggcaggggaacagcacggtcctggaccttgccaat
ttcagcacattaataattgacattccctcgccggacgtaacacttgtgctgaaaatggag
ccgtctgaagacatttccttcatgctattcctggaatacaaagattatccagatgataag
aatcatgtggctaagactcggatcccaaaagagaattccacagaagaggaaaaatatacc
tgggtgctgagtcccaaagacagaacaggagatattggagtgcactaccttgttatgaag
ccaattgtagagccaggcgtcaaatccattaacgccactgtcactgtcatttccattgct
gctcagtgcaaatactggaaagaaactgagtcttcttggagtgaggatggctgcagggtt
ggtccactcaccacacctttggtcactcagtgcctctgtaaccacttaactttctttggc
agctctttctttgttatgccaaacttggtggacgtgtcacgtaccgcagaactttttgct
acgttcacaaacaatcctgtggtggtgtgttttgtgggggccatcttcactgcttatctc
cttgtggtcgtgtgggcacgcaggaaagacatccaggactcagccaaggtcaagataaca
gttcttgaggataatgaccccttggctgagtatcgttatatgctgaatttcaacacagga
catcggcatggtgcatccacctcctctcaggtgacaataactctgctgggtacagaggga
gaaagtgagccccaccacctgacagaccctgagaagccagtgtttgagaggggtggggtg
gacatgttcctgttgaccacacacttctcccttggagacctgcagagtatcaggctgtgg
catgacaactcgggagcacatcctgcatggtatgtcaacaaagtaatggtgcaggatctg
gagactggtcaaaaatggcacttcctgtgtaactcctggttggctgtagatgtgggagag
tgcacacttgacaaggtcttcccagttgccacagagatggatttaaagaggtttagcaac
ttgttcttcatgaagacagccaaggatttccgtgacggccacatctggttctctgtcatt
agtcggcctccttgcagcacttttacacgtgtgcagcgagtgtcctgctgtttttccttg
ctgctgtgcaccatgctgaccagcatcatgttttggggcatccctactgacccttctgag
cagaccatggacttaggtcacatcgagttcacctggcaacaggttatgattggaatacaa
agttcaatcatcatgtttcccatcaatctcctcattgtgagtatcttcagaaatacccgt
cctcgagacaaggccaccaaaactgacgcctctaaacagggcaagactgttcgagtttct
ccctcacagacctcttcccctcagaaagagctgaaggacatcacgccagacactgtgatc
aaggacataaaaaaaattgctcagtcactctcaaaggccatgaagagtccacttcctgac
ctggagcttcggcctggtcagcaggcagacatcaacactctgctgtctctggtggaggac
atcatcagacaacagaaccgagtggctggagacttctatactgatgcctccaagagagat
tgctctatgattctcagtttacgtgcagttaatctacaagaaaacagtgtatgggggagc
cctgagaagacttcagatgaagttcagaagaagagcaacaacagacgatacctgtacagg
cagctgcgtcatgttgagaaggagctgggtttgttgggaccatatcgttttccaaaccca
gacagctacaaccgagccatggagcaggttcagggaatgaagggtctactggagtaccac
ctcccctcgtccagcctggaaggagaccagcttgatggcagccccagtccagaagagagc
atcaacggagacacagccaagaaacgccatcaaggagggctgccatggtggtttgtgttt
gtgggctggatacttgtgattgcaaccagttgtgtgtcaggatacttcaccatgttatat
gggctgacatacgggaaagaccgctctataagctggctgatctccatggtggtctccttc
tttgagagtctctttatcactcaacctctgaaggttcttggttttgctgctttctttgct
cttgttctgaagaaagttgaccaggaggagtatggagagcctcagatagatgagagcctg
aggaacacaaatgatcctgacacagtgcgtgcagcaagaagagacagcacatgcagtttc
tatcagccaccaccccccactgacatcgagaggatgaggaacaacatgatcaaagagcag
aaagtctttgctcttatgagggagattctcacctacatgggatttatgtggatgttgctc
ctggtggcgtatggtcagagggaccctaacgcttactttctgacccaacacatccgacag
agcttcagtagagagatctcagacagtatgagtattcaggatgtattcaactgggcaaac
acaactctgctgagcaacctttttggagagtacccaggattcatcacagatggaaattcc
aagctggtgggtaacgctcgcctccgccaggtgagggtgcgtaataactcctgctatgtg
gctccctccatgcagcagtctgagcgggactgccacgccccatactcatgggacttggag
aatatgggctcctatggtccaggttggagccactttgagggtgataacgcctcactgaac
gttcatagcccgtggacataccagtcccagggtaaactgagggcctaccccatctggggc
agcgtcacgctctacagaggaggagggtttgtggtggacctggggccagatttacaaaat
tccagcagaacccttcagtacctttttgacaacacttggtttgacgtgtacacccaagca
gtctttgtggagttcactgtgtacaatgccaatgtcaacctcttctgcattgtcacactc
atgctggagaccacggccatcggagctttccagttccgcagtgagcttcagagtgtgcgt
ctttaccagtcgaccggtggccttcacatctttgtcatggcctctgaagccatctatttt
ctcttcatcgtctattacatgtttgtgcagggaaagctgatgaagcagcagaaatgggct
tatttcaaaattaagtggaacctgctggagttagcgattatcattctcagctggagtgcg
ctgtccgtcttcatcaagaggactttactgggaaagcgggacatagagtactaccagaac
cacaaagaccaatacgccagtttccacgagacagccaaggctgatgcagtgctggggtat
cttattgccttcctggtactattagctacaatcaaactgtggcacctgttgagactgaac
ccaaagctgcatatgatcacggccactctgcagcgagcatggactgatatttcaggcttc
ctggtggtcatgaccatcatgttcctggcctactcgattgcttctaacctgatgtatggg
tggaaactgtactcctatcggactctgctggatgctgcacagaccatgatcagcctgcag
cttggtatttttaactatgaagaggttctgaattacaatccagtactcggtgcctttctc
atcggctcctgcatcgtgttcatgacctttgtggtgctgaacctcttcatctctgtcatt
cttgtggcattcagtcaagagcagatacatcacaagccatcagaagaagatgagattgtg
gacttgatgcttatgaaactctgcagtttatttggactcaaatgtaagaaacaaggaggt
gactgcccagctgagaagccagttgtttcatctgcttcaaacaatggactttcgatgatt
tcccctgggaatattcatgagggttaa
DBGET
integrated database retrieval system
