Larimichthys crocea (large yellow croaker): 104930119
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Entry
104930119 CDS
T04659
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104930119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104930119
03012 Translation factors [BR:
lco03012
]
104930119
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104930119
Translation factors [BR:
lco03012
]
Eukaryotic type
Release factors
104930119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
104930119
NCBI-ProteinID:
XP_010743132
UniProt:
A0A0F8BAU5
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Position
XII:complement(13219208..13229394)
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AA seq
576 aa
AA seq
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MDPRDTAPDSWEQEDDVEATIDGQLESAFTSLNVNAKPFVPNVNAAEFVPSFAVKAHSET
VDSAVAVEKISTMEVSESAAPVENGDTEMSTEEPWDQKEAEPNEEEPGGGDRGPVEQATT
EETAPEMMEEEEEAPAPKVPPTQPDAPRKEHINVVFIGHVDAGKSTIGGQIMYLTGMVDK
RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPGHK
SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMD
DPTVSWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPTDMCSWYTGLP
FIPHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHVVEV
LSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHK
SIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTI
CLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgcccctgattcctgggaacaagaggacgatgtggaggccacg
atcgacggacagcttgaatcagcgttcacgtccctgaacgttaacgctaaaccgtttgtg
cccaacgtgaacgccgccgaattcgtcccgtctttcgcggtgaaggcgcactcggagacc
gtcgactctgccgttgctgttgaaaagatctctaccatggaggtgtcagaaagtgctgct
ccagtggagaacggcgacacagagatgagcacagaggagccatgggaccagaaagaggct
gagccaaacgaggaggagccaggaggtggcgaccgggggccagtggagcaagcgacaaca
gaggagacggctccagagatgatggaggaggaagaggaagcgccagcgcccaaggtccca
cccacacagccagacgcccccaggaaggaacacatcaacgttgtgttcatcgggcacgta
gatgctggaaagtccaccatcggtggacagatcatgtatctaacaggcatggtagacaag
agaaccttagagaagtacgagagagaagccaaggagaagaaccgggaaacctggtatcta
tcttgggctttagacaccaaccaggaggagcgggacaaaggcaagacggtggaggtgggc
cgagcgtactttgagacagacaaaaagcactttaccatcctagacgctccaggccacaaa
agctttgtgcccaacatgatcggaggtgcatcgcaagcagacctggctgttctggtgatc
tctgccaggaaaggcgagtttgaaactggttttgagaagggtggacagacgcgggagcac
gccatgttggctaaaacagccggtgtcaagcacctgatagtactggtgaataaaatggat
gatcctacggtcagctggagcctggagaggtatgaagagtgtaaggagaaactagtgcca
tttctgaagaaggtgggcttcaacccgaagaaagacattcacttcatgccgtgctccggc
ctgacaggagccaacctgaaggagcccactgacatgtgctcctggtatacaggtttacct
ttcattccacacttggacagtttgccaaatttcaacagatcaagcgatggccctgttaga
ttgcccatcgtagacaaatacaaggacatgggcactgtgattctgggcaaactggagtcc
ggctccatcagtaaagcacagcagctcgtcatgatgccaaacaggcatgtggtggaggtg
ttgagtctcctgtcagatgatgtggagacggatgacgccggtccaggtgaaaacctcaag
ctgaggctgaagggcatcgaggaggaggagatcctgcccggcttcatcctgtgtaatgct
gagaacctctgccactcagggcgcaccttcgacgcccagattgtcatcattgaacacaaa
tccatcatctgtccaggttacaacgcagtccttcacattcacacctgcattgaagaagtg
caaattacggccttaatctgtctggtagacaagaagtcaggagagaagagcaagacacga
ccacgattcgtcaaacaggaccaggtctgcatcgcccgtctgcgcacagcagggaccatt
tgcctcgagacctttaaagactttcctcagatgggacggtttaccttacgagacgaaggt
aagaccattgccatcggtaaggtgctgaagctggtcgctgagcgggactga
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