KEGG   Larimichthys crocea (large yellow croaker): 104930179
Entry
104930179         CDS       T04659                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lco03041]
    104930179
Spliceosome [BR:lco03041]
 Complex B
  Other components
   Complex B specific factors
    104930179
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F WD40_RFWD3 Mala_s_1-like Beta-prop_RSE1_1st VPS8_N DUF7165 WDR54 Beta-prop_IFT122_2nd LisH
Other DBs
NCBI-GeneID: 104930179
NCBI-ProteinID: XP_019122938
LinkDB
Position
X:complement(2683744..2692920)
AA seq 511 aa
MAAEMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKSGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYTHLENL
LTCSYFDPREAYPRGSSKEKRRRAIAEALVREVSVVPPSRLMGLLEQVGSMRLQQYPDNL
SPDMNIDTSGNKDRPVEKESFPTQLYRHIKFGRRSHVECARFSPDGKYLMTGSVDGFIEV
WNFNTGKISKDLKYQAQDSFMMMDDAVLCMCFSQDTDLLATGAQNGKIKVWKIQSGLCLR
RFEHAHNKGVTCLSFSKDNNQILSASFNHTIRIHELRSGKTLRELNGHSSFVNDASFTQD
GFHILSASSDGTVKIWNTKSCECIHTFKSLSRTSEVPVNNVIPLPQNPEHFVVCNHSNTV
VVMNMQGQTVKTFSSDRKEGASFVCCTLSPRGEWIYCVGEDLVLYCFNYTTGRLQKTLTV
HEKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctgcggagatggagccctcggatgtgatccgtctgatcatgcagtacctcaaggaa
aacaacctgtaccgaacgctgaccaccttacaggaggaaaccaccgtgtcactcaacaca
gtggagagcatcgacagtttcattgcagatataaaaagcggccactgggactccgtcctg
ctggctatcgagtccctcaagttgcccgacaacacacttatcgatctgtatgagcaggtt
gtgatggagctcattgaaatgagggaggtgggagcagctcgctcactcctcaggcaaacc
gaccccatgatcatgttgaagcagacacagccggagaggtacacccatttggaaaacctg
ctgacatgctcctactttgacccccgtgaggcgtaccccagaggcagcagcaaggagaag
cggcgcagggcgatcgcagaggcgctggtcagggaggtcagtgtggtgcctccttctcgc
ctcatggggctcctggaacaagtcggctctatgagactacagcagtatccagataatctc
tcccccgacatgaacatcgacacgtctggcaacaaggacagaccggtggagaaagaaagc
tttccaacccagctgtaccgccacatcaagtttggacgacggtcgcatgtggagtgtgcc
cgtttctcacctgatggcaagtacctaatgaccggttcggtcgacgggttcattgaggtc
tggaactttaacactggaaaaattagtaaggatttaaagtatcaagcccaagatagcttc
atgatgatggatgatgctgtgctgtgtatgtgcttcagtcaggatacagatctactggca
actggagcccagaatggaaaaataaaggtgtggaagatccagagtggtttgtgcctgcgc
aggtttgagcatgctcacaacaaaggtgtgacctgtctgagcttctctaaggacaacaac
cagatcctcagtgcctcctttaaccacacaatcagaatccatgaattgaggtcaggcaag
acactaagggagttaaacggccattcatcattcgtaaacgacgcgtctttcactcaagat
ggattccacatcctcagtgcctcatctgatggtactgttaagatttggaatacaaaatcc
tgcgaatgcatccacactttcaaatctctatcccggacatcggaagtccccgtcaacaat
gtgattcctctaccccagaatccagagcactttgtggtttgtaaccactccaacacggtg
gtcgtcatgaacatgcagggtcagaccgtgaagactttcagctcagatagaaaggaagga
gccagctttgtgtgttgcaccctgtcaccccgcggggagtggatttactgtgtgggagaa
gacttagtgctgtactgcttcaactatacgacggggaggctgcagaaaacgctgaccgtt
cacgagaaagacgtaattggcatcgctcaccacccacatgagaatctgattgccacatac
agtgaggatggcctcctaaggctatggaaaccttaa

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