Larimichthys crocea (large yellow croaker): 104930240
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Entry
104930240 CDS
T04659
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104930240 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lco01007
]
104930240 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104930240 (farsa)
Enzymes [BR:
lco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
104930240 (farsa)
Amino acid related enzymes [BR:
lco01007
]
Aminoacyl-tRNA synthetase
Class II (U)
104930240 (farsa)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104930240 (farsa)
Prokaryotic type
104930240 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
tRNA_synthFbeta
tRNA-synt_2
PheRS_DBD3
tRNA-synt_2b
HTH_11
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
104930240
NCBI-ProteinID:
XP_027141577
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All DBs
Position
XII:complement(13006125..13014930)
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AA seq
497 aa
AA seq
DB search
MADAGVVETLLQRVEKADDGVDSLEVASSLGVDHQVIVGAVKSLQALGDVISAELRSSKR
WELTAEGTEIAEQGSHEARVFSSIPLEGLPQGELMKLSFGKIGFSKAMSNKWIRVDKAHE
GGPRIFRTVESIDDQVREKLLVVKKGNMTELEEKEKNELKKRKLLSEVTVKSYWITKGNS
FSTTITKQETELTPEMIANGSWKEKKFKPYNFEALGVAPDCGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPALAHEFPQEYLERVKKVH
SEGGFGSQGYKYDWKIEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGILHQFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPICRLES
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccggtgtggtggagacacttctacagcgggtcgagaaggcggacgatggc
gtggacagcctggaagtggcgagcagcctcggcgtggaccaccaggtcatcgtcggagcc
gtgaagagtctgcaggctctcggcgacgttatctcagccgagctgcgctcctccaaacgc
tgggagctgacggcggaaggcacggagatagccgagcagggcagccatgaagcccgggtc
ttcagctccatcccgctggagggtctgccacagggcgagctcatgaaactgtcctttggg
aagattggcttcagcaaggccatgtccaacaagtggatcagagtggacaaagcacacgag
ggcggcccgaggatattcaggaccgtggagagcatagacgaccaggtcagagagaagctg
ctggtggtgaagaaaggcaacatgacagagctggaagagaaggagaagaacgagctgaag
aagaggaagctgctctctgaagtgacggtgaagtcatactggatcactaaaggcaactcc
ttcagcaccaccatcaccaaacaggagacggagctcacgcctgagatgatcgctaatggc
agctggaaagagaagaagtttaagccctataactttgaggccctgggcgtggcccctgac
tgcggccacctccaccctctgatgaaggtgcgaacacagttcaggcagatcttcctggag
atgggcttcactgagatgcccaccaacaacttcatagagagctctttctggaactttgac
tccctgttccagccccagcagcacccggccagagaccaacacgacaccttcttcctgtct
gacccagcactcgcacacgagttcccacaggagtacctggagagggtgaagaaagtccac
tcagagggaggctttggatcacaggggtacaagtacgactggaagattgaggaggctcag
aagaacatcctccgcacacacactacagcagtcagtgcacgcatgttgtataaactcgca
caacaggagaagtttacccccgtcaagtatttctcaatcgaccgggtgttcaggaacgag
accttagacgccacccatctggccgagttccaccagatagaaggcgtggtggctgattac
gggctcacgctgggagacctcatgggcatcctgcaccagttcttcaccaaactaggaatc
accaaactccgcttcaagcctgcctacaacccgtacacagagcccagcatggaagtgttc
agctaccacgaaggactgaagaagtgggtggaagtgggaaactcaggggtctttagaccg
gagatgctgctgcccatgggtctgcctgaggacgtgtcagtcattgcctggggactgtct
ctggagaggcccaccatgattaaatacggcatcaacaacatcagagagctggtgggacac
aaggtgaacctacagatggtgtatgacagccccatctgtcgactggagtcctga
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