KEGG   Larimichthys crocea (large yellow croaker): 104930278
Entry
104930278         CDS       T04659                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104930278 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104930278 (xrcc1)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     104930278 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 104930278
NCBI-ProteinID: XP_010743324
LinkDB
Position
XIII:complement(31778144..31802457)
AA seq 629 aa
MPEIKLKHVVSCSTEDTTHKADNLLSSDTYRKWKAARAGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSASVRDQDYEVLLVTSSFMSPTESRNGTNTSRVRFFGPNQLQKST
AQEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPLPTTSPKLTKLGQFRVKDEPPS
PGPSLQPGSLFFNRDNATKSSTSPKVSPQSQKLSYAAAALQAGGSSHSSGQASSSSSASP
QPPTKRKFEFSKERQSASGPPPSKKTSPTGSPEGKAATPKHKPSPASTPSPSTAKASAAQ
KSADKRRESQSKPEPKPRQKKAKPESAQSVPFNRMMEGVVFVLSGFQNPFRGELREKALD
MGAKYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVIDCHKRKQNISHKRYLMD
GAESSSESEMEVDDESEEEINTKTPQKQERQATPKKTPEKRKEDDEYAGSTDVDEPGGDD
DESAVDTEDELQRVENQSRQKKVTAEGKTIKEEDPYGGSTDENTDAEAEQDHPIPELPDF
LKGKHFFLYGKFPNNERRLLLRYIVAFNGAIEDYMTEKVQFVVTSEGWHDSFEDALMENS
NLNFVKPAWIYAINERQKMLPYQPYTVVP
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgccagaaatcaaactcaaacacgtcgtgtcttgcagcaccgaggacactactcacaag
gcagacaacctgctgagctctgacacctacagaaagtggaaagcagcgagagccggagag
aaacagacgtcagtcatcctgcagttcgagaaggaggagcaggtgcacagcattgatatt
ggaaatgaagggtcggcgtttatcgaggtgttggttgggaattcttcagcttcagtcaga
gatcaggactatgaggtcctattggtcacgtcttccttcatgtctcccacggagagccgt
aacggcaccaacacgagccgggttcgtttctttgggcccaaccagctgcagaagagcacg
gcacaggagaagtgggacagagtgaaaattgtgtgtagccagccatacagcaagaacatc
gcatatggtctggcctttgtcaagtttcattcaccgcctgacaaaaacgaccctcttcca
acaacctccccgaaactgacaaagctgggacagttcagggtgaaggatgagcctccctcg
cccgggcccagccttcagcccggcagtctcttcttcaatcgagacaatgcaacaaagtcc
agcacgtcccccaaagtgtctcctcagagtcagaagctgagttatgctgctgctgccctg
caggctggtggcagctcccactcatcaggccaagcttcctcctccagctctgcctcacct
cagccaccaacaaaaagaaaatttgagttcagcaaagagcggcagtctgcctctggccct
cctccctcaaagaagacaagtccgacaggctcacccgaaggcaaagccgcgacccccaaa
cacaagccgagcccagccagcacgccaagtccgagcactgcaaaagcttccgcagcacag
aagtctgctgacaagcggcgagagagccagtccaaacccgaacctaaacccagacaaaag
aaagcaaagcccgagagcgcacagtcggtcccgttcaatcggatgatggagggggtggtg
tttgtactcagcggcttccaaaaccccttcagaggcgagctaagggaaaaggctctggac
atgggagccaaataccgacctgactggaccccagactccacacacctcatctgtgccttc
gctaacacccccaagtacagccaggtgaaatcagcagggggcatcatcgtacggaaagaa
tgggtaatcgactgccataagaggaaacagaacatctctcataagcgttatttgatggat
ggagcagagtcaagctcagagagcgaaatggaagtggacgacgagagtgaagaggaaatt
aacacaaagactccacagaagcaggagagacaagcgactcccaaaaagacgccagaaaaa
aggaaggaagacgatgagtatgctggctccaccgatgtggacgaaccaggaggtgatgac
gacgaatctgctgtggacacggaagacgagctgcagagggtagagaaccagagcagacag
aagaaagttacagcagaagggaagactataaaagaggaggatccgtatggggggtcgaca
gatgaaaacacagacgccgaggctgagcaggatcatccgatccccgagctaccagacttc
ctgaagggaaaacactttttcctctatggaaaattccctaacaacgaacggcgactactg
ttgagatacatcgtcgcctttaacggagcaattgaagactacatgacagagaaggtgcag
tttgtggtgacaagtgaagggtggcacgactcctttgaagatgcgctgatggagaacagc
aatctgaactttgtcaaacccgcatggatttacgcaatcaacgaacgacaaaagatgctg
ccctatcagccctacaccgtcgtcccctga

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