Larimichthys crocea (large yellow croaker): 104930321
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Entry
104930321 CDS
T04659
Symbol
usp25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104930321 (usp25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104930321 (usp25)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104930321 (usp25)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104930321 (usp25)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104930321 (usp25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UBA_4
PhnI
UIM_2
Motif
Other DBs
NCBI-GeneID:
104930321
NCBI-ProteinID:
XP_010743374
LinkDB
All DBs
Position
XXII:complement(11888928..11917153)
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AA seq
1168 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSNGDLAEAVAYLTEKNAKV
PQQDETTYYQTSQVASDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETG
ITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRKRIDNCPVGLKNVGNTCWFS
AVIQSLFNLLEFQRLVLNYSPPARVHDLPRNQKEHRNLPFMQELRNLFSLMVGSKRKYVD
PSRAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKAEEDREGEKPKNPMVELFYG
RFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSAENSPRSGQE
HWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLYMDRYMDRNREITRIKREEIR
RLKEHLTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFASSKPVCTSPVEDIDSSAPPGG
TTGQQLPQPSTAEQDSLPPLESSGPASVPSTAPSAAQQQRVPIHKPFTQSRLPPDLPMHP
APRHITEEELRVLESCLHRWRSEVENDTRDLQGSITRIHRTIELMYSDKSMMQVPYRLHA
VLVHEGQANAGHYWAYIYDPHQRCWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYI
NDKKPFLIEEEFDKETGQILSGMDKLPPDLKHYVKEDNELFDKEIDEWDALQAHKAQQEK
LALATAAAAASAASSTSTSSSSPQPMSIESSPPDNAVPQQEPEYMEQPSPTNDSKHLQED
TERAIARAAAEQEERSPEALLNASLPPPTSPQPEVQVSTSSTPPPDLVMEDESPGQRTVE
VAIPNVGTFVIESEEGGYDDEAMMTPNMQGIIMAIGKSGSVYEKNGPEAAFFKAIKLEYA
RLLRFAQEDTSPENDYRLQHIIVYFIQNQAPKKILERTLLTQFADRNLAFDERCKSIMNV
ARAKLDLIKPEEVNMDEYEMWHQAYRNFRETTVFMVTGLELFQKTNYVEALMYLIYSHQY
NRELLSKGLYRGHDEELLGHYRRECLLKLNEQAAAMFESGEEPEVTTGLGIMNELVVPCI
PLLLVHDTERDLLAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKSFHDPPK
LPAYSTLELCERFSRIMAALCRVPTEGR
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccagcagcattctcagaagcaccagcagacgctacta
aaccaattgagggaggtcacaggcaccacagatgttcagctgcttcagcaggccctgcag
gtaagcaatggagacctggccgaggctgtggcgtatctgacggagaagaacgccaaggtt
ccgcagcaagatgagacgacatactaccagacatcccaggtggccagcgacagatatatc
agcgtgggcagccaggcagacacgaacgtgattgacctgactggggatgataaagatgac
ctgcagagggctattgccctcagcttggaggagtccaaccgggctttcagggagacaggc
atcactgatgaggagcaggccatcagcagagtcttggaggccagcatagcggagaacaag
gcaagtctgaagcgcacccacacagaagtatggagcgattcacccaacccgcacgacagg
aagcggatagacaactgccccgtggggctgaagaatgttggcaatacctgctggttcagt
gctgtcatacagtctctgttcaacctgctggagttccagaggctggtgctcaactactcg
ccaccggccagagtccacgacctgcctcgcaaccaaaaggagcacaggaacctgcccttc
atgcaggagctgaggaacctcttctccctcatggtggggtccaagaggaaatacgtggat
ccgtcacgagctgtggaaattctcaaggacgccttcaagtccagcgagtcgcagcagcag
gatgtgagcgagttcacccacaagctgctggactggctggaggacgccttccagatgaag
gcagaggaagacagggagggagagaagccaaagaaccccatggtggagctcttctacggc
cgcttccttgctgtgggtgtcctggaaggtaaaaagtttgaaaacaccgagatgtttggg
cagtacccactgcaggtgaatggcttcaaggatctccatgaatgtctcgaggcggcgatg
atcgaaggcgagatcgagtccctgcactcggcagagaactcacccaggtccggccaggag
cactggttcacagaactccctcccgtgttgacctttgaactgtcgagatttgaatttaac
caagcgctgggacgacccgagaagatccacaacaagctcgagtttccctcgatgctctac
atggacaggtacatggacagaaacagggaaataaccaggatcaagagggaggagatcagg
aggctgaaagagcacctgacactgcttcagcagcgactggagaggtatctgagttatggc
tcaggccccaagaggtttcctctggcagatgtcctccagtatgccatggagtttgcctcc
agtaagccagtgtgcacctccccggtggaagacatcgactcatcagcacctcccggtggc
acaacagggcaacagctgccccagccaagcacagccgagcaggactccttgcctcccctt
gagagctcaggtcctgcctcagtccccagcacagctccctctgcagcccagcagcagaga
gtacccatccataagccctttacccagtcccggttaccccccgacctccccatgcaccct
gccccacgccacatcacagaagaagagttgagggtgctggagagctgcttgcatcgctgg
aggagtgaagtggaaaatgacacccgtgatctgcagggcagtataaccagaatccacaga
accattgagctaatgtactccgacaaatcaatgatgcaggttccataccggcttcacgcg
gtcctcgtccatgaaggccaggctaatgcaggccactactgggcttacatctacgaccca
catcagcgttgctggatgaagtacaacgacatttctgtcaccaagtcgtcctgggaggag
ttagtcagggactcgttcggaggctaccgcaacgccagtgcctactgtctcatgtatatt
aacgacaagaagccctttctcatagaagaggagtttgataaagaaacaggacagatactc
agcggcatggacaaactgcctccagacctgaagcattacgtgaaggaggacaacgagctg
tttgacaaggagatcgacgagtgggacgccctgcaggcccacaaggcccagcaggagaag
ctggccctggctacagcagccgcagccgcctcggcagcatccagcacttccacttcttcc
tcttccccccagcccatgagtattgagtccagccctccagacaacgcagttccccagcag
gaacccgagtacatggagcagccgtcacccacgaatgactccaagcacctgcaggaggac
actgagcgagccatcgccagggctgctgcagagcaggaggagaggagccccgaagcattg
ttaaatgcttctctcccccctcccacctcccctcagcctgaggtccaggtgagcacctcc
tccacccctcctcctgacctggtcatggaggatgagtcccctggccagcgcacggtagag
gtggccattcctaatgtggggacctttgtcattgagtcagaagagggggggtatgatgac
gaggcaatgatgacccccaacatgcagggtattattatggccattggcaaatccggcagc
gtatatgaaaagaatgggcctgaggcagccttttttaaggccataaagctggagtacgct
cgtcttctgagatttgcccaagaggacacgtctcccgagaacgactaccgactccagcac
atcatcgtctacttcatccaaaaccaggcgcccaagaagatcctggagaggactctgctc
acgcagttcgctgacaggaacctggccttcgatgagagatgtaagagcattatgaatgtg
gcacgtgccaaactggacctaattaagccagaggaggtcaacatggatgaatatgagatg
tggcaccaagcctaccggaatttccgcgagacgaccgtcttcatggtgaccggcttggag
ctgtttcagaaaacaaattatgtggaggctctgatgtatctgatatactcgcaccagtac
aacagagaacttttgtccaaaggcctgtacagagggcacgacgaggagctcctcggtcat
taccgccgggagtgtttgctgaaattaaacgagcaagcggctgccatgttcgagtccgga
gaagaaccggaggtgaccacgggcctgggcatcatgaacgagctggtggtaccctgcatc
cctctgctgctggtccacgacacagaaagggacctgctggcagtggaggacatgaggaac
cgctggtgctcctacctgggccaagagatggaatccaacctccaggaaaagctgacggac
ttcctccccaagttactggactgctcgacggagatcaaaagtttccacgaccctcccaag
ctccccgcctactccaccctggagctgtgcgaacggttcagccgcatcatggccgccctc
tgcagggtgcccaccgaggggagatga
DBGET
integrated database retrieval system
