Larimichthys crocea (large yellow croaker): 104930375
Help
Entry
104930375 CDS
T04659
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104930375
03036 Chromosome and associated proteins [BR:
lco03036
]
104930375
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104930375
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104930375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
104930375
NCBI-ProteinID:
XP_010743449
LinkDB
All DBs
Position
VIII:complement(14743557..14750457)
Genome browser
AA seq
755 aa
AA seq
DB search
MEGEVVSMETSQADGKGLPEGEVLIQGAAMAPQGEVAGNMEMMVMDALDPTLLQMKTEVL
EGGGTVTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVEGLQATYVDAS
AANKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELQGTRDEEEEEEDDG
EATAEVELPVPAQEDPEWSKDPDYQPITSVRKGKKGKKSRLRYGDGDRDMDVSVYDFEEE
QQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDE
RPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPF
KCSMCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYI
CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEKGKKCRY
CDAVFHERYALIQHQKTHKNEKRFKCEQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKT
FRQKQLLDMHFKRYHDPNFVPTAFVCNKCSKTFTRRNTMLRHSENCTGEVTEEENGTPTP
KKGRPRGRKRKMQTRRDEDDDEDDTEAELDELEEEEGLSEIEVEQAPPVVPIPAPVEPPV
KRKRGRPPKSKLDTAAIIRVEDEATGEVDDIIVKKEVGAEQDDQDEAAVEQVVVGGGKST
IQMEELPQEEGTAPLSEAPPNGDLTPEMILSMMDR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaggttgtttccatggagacctctcaggctgatggaaagggcttgccagaa
ggcgaagtcttgatacaaggggcagccatggctccacagggagaggttgctggtaacatg
gagatgatggtgatggacgcgctcgatccaactctgctgcaaatgaagacagaagtgctg
gagggcggtggcactgtgactgtcactggtggagatgagggtcagatcatcacgctccag
gtggtgaatatggaggaacaggccggagctgcattaggtcttggtcaacttcagctggtg
caggtgcctgtcacaacaaccactgtagagggacttcaggctacttatgttgacgcctca
gcagctaacaaggacgcagagccagttatctgtcacactcttcccttgccggagggtttc
caggtggtaaaagtgggcgccaatggtgaagtagaaactgtagagcaggaggagctccag
gcagcgcacgatgaacttcaagggacaagagatgaagaagaagaggaggaggatgatgga
gaagcaacagctgaagtagagcttcctgtgcctgcacaagaagacccagaatggtccaaa
gatccagactaccagcccatcacctctgtccgtaaaggaaagaaaggaaagaagagccgc
ctgagatacggagatggagatcgtgacatggatgtttctgtgtacgactttgaagaagag
cagcaagaggggctgctgtcagaggtcaatgctgagaaggttgtaggcaacatgaagcca
ccaaagcccaccaagatcaagaagaaaggtgtaaagaagactttccagtgtgagctgtgt
agctacacctgtccaaggcgctccaacctggaccgacacatgaagagccacacagacgag
agaccacataaatgtcacttgtgtggacgggccttccgaacagtcacgctgttgagaaac
cacctcaacacacacacaggcactcggccacataaatgcacagattgtgacatggcattt
gtgaccagcggtgagttggtgcgtcaccgtcgctacaaacacacacacgagaagcccttc
aagtgctccatgtgcgactattgcagtgtggaggtgagtaagctgaaaaggcacatccgc
tctcatacaggggagcgacccttccagtgcagtctgtgcagctatgctagcagagacact
tacaagctgaagagacacatgaggacacattcaggtgaaaagccgtacgagtgctacatc
tgccatgcccgtttcacgcagagcggcaccatgaagatgcatattctgcagaaacacacg
gagaacgtggctaagttccattgcccacactgtgatactgtcatcgcacgcaagagtgac
ctcggcgttcacttgcggaagcagcactcgtttattgagaagggaaagaaatgccgttac
tgtgatgctgtgtttcatgagcgatacgctctcatccaacaccagaagactcacaagaac
gagaaacgattcaagtgtgaacagtgtgactactgctgcagacaggagcgccacatgatc
atgcacaagcgcacacacactggggagaagccgttcgcctgcagccagtgtgagaaaaca
ttccggcagaagcagcttctggacatgcacttcaagcgctaccacgatcccaactttgtc
cctactgccttcgtctgcaacaagtgtagcaagaccttcacccgcaggaacaccatgttg
cgtcatagtgagaactgcacaggcgaagttactgaagaagaaaatggaactcccacaccc
aaaaagggtcgtcccaggggcaggaagaggaagatgcagaccagaagggatgaagatgat
gatgaggacgacacagaggctgagctggatgagctggaggaggaagagggcttaagtgag
attgaagtggaacaggccccaccagtcgtccctatcccagctcctgtggaaccaccagtc
aagaggaaacgtggacgacccccaaagagcaaactagacacggccgctatcatccgtgtg
gaggacgaggccactggagaggtggatgacataatcgtgaagaaggaggttggagctgaa
caagatgaccaggacgaggcagccgtggagcaggtggtggttggtggggggaagtcgacc
attcagatggaggagttaccccaggaagagggcacagcaccgctgtctgaggccccgcct
aacggagacctgacccccgagatgatcctcagcatgatggaccggtga
DBGET
integrated database retrieval system
