Larimichthys crocea (large yellow croaker): 104930394
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Entry
104930394 CDS
T04659
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8 isoform X1
KO
K03066
26S proteasome regulatory subunit T6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
104930394 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lco03051
]
104930394 (psmc5)
Proteasome [BR:
lco03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
104930394 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
PRS7_OB
nSTAND3
RuvB_N
TIP49
AAA_3
AAA_18
AAA_28
Mg_chelatase
NPHP3_N
AAA_33
AAA_14
Parvo_NS1
ATPase
IstB_IS21
AAA_17
PhoH
AAA_24
AAA_7
DUF815
AAA_25
FapA
Sigma54_activat
bpMoxR
DUF5906
RNA_helicase
ABC_tran
AAA_11
APG6_N
Zeta_toxin
DivIC
AAA_19
HR1
TsaE
Motif
Other DBs
NCBI-GeneID:
104930394
NCBI-ProteinID:
XP_019127516
LinkDB
All DBs
Position
XVI:complement(19560842..19565519)
Genome browser
AA seq
438 aa
AA seq
DB search
MCACLSYYLPPRTRSSSGNPPGPEADAGVSNMEVDGVDHQMEMGESKGGSGLRQYYLSKI
EELQLTVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRVMDKKKVLVK
VHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTY
EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD
CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSE
VQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDI
LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVA
KVMQKDSEKNMSIKKLWK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcatgcctgtcatattatttaccacctcgaacaagaagcagttccggaaacccg
cctggtcctgaagcggatgctggagtttccaacatggaggtggacggtgtcgatcatcag
atggagatgggggagagtaaaggtggctcaggtctccggcagtactacttgtcaaagata
gaagagttacagttgacggtaaacgacaagagccagaatctcagacgtctgcaggcacag
aggaatgagctcaatgccaaagtgcgtctccttcgtgaggagctgcagttgctacaggag
caggggtcctatgtaggagaagtggttagagtcatggacaaaaagaaagtgctggtcaag
gtgcatccagaaggaaaatttgtcgtggacgtggacaagaacatcgacatcaacgatgtg
actccaaattgtcgcgtggctctgcgtaacgacagctacaccctgcacaagatcctgccc
aacaaggtggaccccctggtgtcccttatgatggtggagaaggtgccggactccacctac
gaaatgatcggtggcctggataagcagatcaaggagatcaaggaagtgatcgagctgccc
gtcaagcaccctgagctgttcgaggcgttgggaatcgcacagcccaagggtgtgctgctg
tacggtcccccaggaacagggaagaccctgctggccagagcggtggcccaccacactgac
tgtaccttcatcagggtgtccggctccgagctggtccagaagttcatcggagagggtgcc
cgtatggtgcgcgagctgttcgtcatggctagagaacacgccccctccatcatcttcatg
gacgagatcgactccatcgggtcgtctcgtctggagggcggctcaggcggtgacagcgag
gtgcagaggacaatgctggagctgctcaatcagctggacggcttcgaggccaccaagaac
atcaaggtcatcatggccaccaaccgtattgacatcctggactcggctctgctcaggcca
ggcaggatcgacaggaagatcgagttcccccctccaaacgaagaggctcgtctggacatc
ctgaagatccactccagaaagatgaacctgacacgtggcattaatctgaggaagatcgca
gagctcatgcccggagcctctggcgctgaggttaagggtgtttgcacagaggcagggatg
tacgctctgagagaaaggagagttcacgtcacccaggaggacttcgagatggctgtggca
aaggtgatgcagaaagacagcgagaagaacatgtcgatcaagaagctgtggaagtaa
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