Larimichthys crocea (large yellow croaker): 104930435
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Entry
104930435 CDS
T04659
Symbol
clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104930435 (clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104930435 (clasp1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104930435 (clasp1)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104930435 (clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Adaptin_N
Cnd1
MMS19_C
ParcG
TAN
HEAT_DAAF5
Paxt-1_C
TPR_20
Motif
Other DBs
NCBI-GeneID:
104930435
NCBI-ProteinID:
XP_019115947
LinkDB
All DBs
Position
I:complement(4847486..4933028)
Genome browser
AA seq
1646 aa
AA seq
DB search
MMEPSMENCLAQVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLQERFRTHVGTVLPSLIDRLGDSKDQVRDQDQIVLLKIM
EHAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAMSCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQKSGNMISSSGSD
KNFEDEDSVDGGRSSSSSSSKAPPSGRRTVVSSVRRPSSATAAKAAGKEAGAGAVDEEDF
IKAFEDVPSVQIYSNRELEDQLSKIREVLSDDKHDWEHRVLALKRVRSVMLAGAIEYEGF
PQQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSILGNKFDHGAESIMPTLLNLVPNSA
KVMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLER
HVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSMTRSKLVSTRVHTTPGSLQRSRSDID
VNAASSAKSRLSTVPASSPFSSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGAST
SVVDSRGRSRAKVVSQSQRSRSANPISAGSRSSSPGKLLGHSSYGRIPRATASASTTPAD
KRSRIPRSQGCSRETSPSRMGLASLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTSR
ESSRDTSPARGFAPLASRRHSRSTSALSTADPHSQSDRYGVIHQARISASVNAMRVLNTG
TEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYSSRNGGIPH
YLRQTEDVAEILNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPH
SKRVFSMFLETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRES
FPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIIT
WTTEPKSSDVRKTLHNWVSEELAGRSSTAALLSTEGNQEERCKQAAQVVLISLFELNTPE
FTMLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTSQRHTPSRTSPLTSPT
NCSHGGLSPSRLWGWGVDGLSKHPPAPPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTEN
MNSEEIYSSLRGVTEAIQSFSYRSQEDLNEPIRQEGKRDDAAGREGVASSHGSDPRLGLD
MVEGGRTALDNKTSLLNTPSPRSFSGPRSREFAPYGYGETICTYDKSALKEAVFDDDVEQ
FRDCRRQESGENKMTIPKVFGPAVGQDHSDMVADLLKELSNHNERSEERKGALVELLKIT
REDSMAVWDEHFKTILLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKT
LEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVMER
IAKDSSLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMK
LLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccagcatggagaactgcctggcccaagtcctgcagaaggacatgggccga
cggctgcaggtggggcaagagatcattgattacattttggacaaggagaagtcccacgac
ctggaacaggatcagaccgcactggacaagatggttgacggcattgccagctcctgggtc
aactccagcaacttcaaggtggctctgctcggcctggacctcttatctgccttagtgacg
aggttacaagagcggtttaggacccatgtaggaacagttctgcccagccttattgatcga
ttgggagattcaaaagaccaagtgcgagaccaagaccaaatagtactgctaaagatcatg
gagcacgctgctagcccgcagtatgtgtgggacaggatgctgggaggcttcaaacacaag
aacaacaggaccagagaaggagtgtgcctttgtcttattgccacgctgaacacatacgga
gctcaaggcctgaccctcagtaaaattgtccctcatatatgtaacctcttgggggacccc
acaagccaggtacgtgatggagctatgagctgcctggtggagatctacagacatgtgggt
gagagggtgaggatggatctcagcaaaaagggccttccacagtcacggttgaatgtaatc
ttcagcaaatttgatgaagtccaaaaatccgggaacatgatctcatcctctggctcagac
aagaacttcgaggatgaagactctgtggatggaggccggtcctcctcctcttcatcatcc
aaagcaccccccagtggcaggaggactgtagtgagctccgttagaaggcccagctcagcc
accgcagctaaggcggcaggtaaagaagcaggtgccggagctgttgatgaagaggatttc
atcaaagccttcgaagacgtgccctcagtccagatctactctaacagagagcttgaggac
cagctgtccaagatcagagaagtcctgtctgatgacaaacatgactgggaacaccgagtg
ttggcgctaaagagggtccgttctgtcatgctggctggggcaattgagtacgagggtttc
cctcagcagctgcgtctcctagaggctccattaaaactgtcagctaaagacctgcgctca
caggtggtccgtgaggcctgcatcacactgggacatttgtcatcgattctgggtaacaag
tttgaccacggagctgagagcatcatgcccacactgctgaaccttgtacccaacagtgcc
aaagtcatggccacatctggaatggctgccatccgcctcatcctcaggcacacacactat
ccacgtctcatccccatcatcaccagtaactgcacttccaaatcagtagcagtcagacgg
cgctgttatgagttcctagacctcatgttacaagagtggcacactaatacactggaaaga
catgtggctgttctgactgagaccatcaagaaaggcatacacgatgctgactccgaggcc
agatccattgcaagaaagtgctattggggtttccacggtcactacagccgtgaggcagag
catctgttccaggcactggagtccacctatcaaaaggctcttcagtcccacctgaagagc
tctgacagcatcgtgtctcttccccagtctgaccgctcttcgtcatcttcccaggagagt
cttaatcggccattgtctgtgaaaagtgtcattggagggagcatgacaaggagtaagctg
gtgagcaccagggtgcacactacaccgggatctctgcagcgctcccgtagtgacatcgac
gtaaacgccgcctccagcgccaagtctcgtctgtccaccgtccccgcctcctcaccgttc
agctcggcggctgcccttcccccagggtcctacgcctcattagatggtactcccggtaaa
agcgatggtcgtgttcgtaccaggagacaaagctcgggcagcgtgggcggggccagtaca
tcggtggtggacagcaggggacgcagcagagccaaagtcgtctcccagtcccagcgatcc
agatcagccaatcccatcagtgccggcagtcgctccagctccccggggaagttgctcggc
cacagcagctacggccgcatcccacgagccacggcatcggcctccaccacgccagcagac
aagcgcagcaggatccctcgcagccagggctgcagtcgcgagaccagccccagccgaatg
ggcctcgccagcctgtgtggtaaagctcttcttcctgctgctcttccctaccgcacgcta
gcccggagccgcattccccgtcccagcatgagtcagggctgtagtcgcgacaccagtcgc
gagagcagccgcgacaccagccccgctcggggcttcgctccactggcctcccgacgtcac
tcccgttcaaccagcgctctctccacagccgacccccacagccagtcagatcgatatggt
gtgattcaccaagcaagaatctctgcgtcagttaacgccatgagggtccttaacaccggc
acagaggtggaggctgcagttgctgatgctctgctattaggagactccaggaataagagg
aagccgctgaggcggcggtacgagtcaccagggatgtactccgatgacgacgccaacagc
gatgcttccagtgcctgctcagagcgctcgtacagctcacggaacggaggcatcccccat
tacctgcgccagacggaggacgtggcagagatcctgaaccactgcgccagctccaactgg
tcagagaggaaggagggactgctgggcctgcagaatctcctcaagagccaaagaatactg
agccgtgtggagctgaagagactttgcgagatcttcacaaggatgtttgcagatccacac
agcaagagagtgttcagcatgttcctggagactcttgtggacttcatcacggtacacaga
gaggacctgcaggactggctgttcgtcctgctcactcagctgctgaagaagatgggggca
gatctgcttggctccgtccaggccaaagtccagaaggccctggatatcacaagggagtcg
ttcccatttgaccaacagttcaacatcctgatgaggtttatcgtcgatcagactcagact
cctaatctcaaggttaaggtggccatcttgaagtacattgagtccctggctcggcagatg
gacccgacggactttgtcaactccagcgagacgcgcctggccgtatctcgcatcatcacc
tggaccactgaacctaaaagttctgatgttaggaagacccttcataactgggtgagcgag
gagctagctggcaggtccagtactgcagccttactgtccactgagggcaaccaggaagaa
aggtgtaagcaggcggcccaggtggtgctgatctctttgtttgagctcaacacccccgag
ttcaccatgctgctgggggctctgcccaaaaccttccaggatggagctaccaaactgctg
cacaaccacctgaagaactccagcaacactagcagcagtgtggggtctccgagcaacacc
atcggtcggacatcgcagcgccacactcccagcaggaccagccccctcacctctccaaca
aactgttcccatggaggactatctccaagtcggttatggggttggggtgtcgacggactg
tcaaagcacccccctgcccctcctcctcctcctccaccccactccacccctgctgccccc
tccctaagggtcctgcgcagagcatattcacccagcatgatggagtacgacacagagaac
atgaactcagaagagatctacagctcgctgcgtggcgtcaccgaggccatccagagcttt
agctaccggagccaggaggacctgaacgagccaataaggcaggaagggaagagggacgat
gcagcaggaagagaaggcgtcgcgtcctctcacggttctgacccccgcttgggcttagac
atggtggaagggggtcgcaccgccttagacaacaagacctcacttctcaacacgccatca
cctcgctccttctctgggccacggagccgcgagtttgctccttatggctacggagaaacc
atctgcacgtatgacaagagcgccctgaaagaggccgtcttcgacgatgacgtggagcag
ttccgcgactgccgacgtcaggaaagtggtgaaaacaagatgacgatccccaaggtcttt
ggtcctgcagtcggtcaggaccactcagacatggtggccgatctgcttaaggaactgtcc
aatcacaacgagcgttccgaggagcgtaagggcgccctggtggagctgctgaagatcaca
cgagaagacagcatggctgtgtgggacgaacactttaaaaccatcctcctactcctgctg
gagacactgggagataaagatcacactatccgagccctggccctgcgtgtgttgaaagaa
atcctgaggaaccagccggcccgcttcaaaaactatgctgaattaaccatcatgaagacc
ctggaggctcacaaagactctcacaaggaggtggtgcgtgcagccgaggaggcggcgtcc
accctggctggctccatccacccggagcagtgcatcaaggtgctgtgccctattgtgcag
acagccgactaccccatcaacctggctgccatcaagatgcaaaccaaagtcatggaacgc
atcgcaaaggactcttcactgcagctgctgcccgacatcatcccaggactcctgcagggc
tatgacaacacagagagcagcgttcgcaaggccagcgtgttctgcctggttgctatctac
tctgtgattggcgaggacctcaaaccccacctggcacagctcacgggtagcaagatgaag
ttactgaacctgtacatcaagcgggcccagaccaccaacagcaatagcagcagttcctcg
gacgtctcctctcacagttaa
DBGET
integrated database retrieval system
