Larimichthys crocea (large yellow croaker): 104930499
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Entry
104930499 CDS
T04659
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein isoform X2
KO
K10891
fanconi anemia group D2 protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104930499 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104930499 (fancd2)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
104930499 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
Motif
Other DBs
NCBI-GeneID:
104930499
NCBI-ProteinID:
XP_019119021
LinkDB
All DBs
Position
VI:9394032..9408969
Genome browser
AA seq
1451 aa
AA seq
DB search
MMRKKRRSSVDKGEEAATATKSKKSRSAGRQPKEAPSEETNQSVFGVFLREAGVTLKQGG
TSNEIAVDQVVFQKRIQKQLKKSPRYPGIVQEFTAGLESHIEDPERFRNCLLPCVPRLSD
GDSSCVSSFQESLLRMLLGIEMLQTFIINILLEKLPEYMLDGPADGGLSIPRIIINQLKW
LDRVVDSKELATKLMELVSVAPVEVQRDIITSLPEMLDDSQHNDIARELNTLLQENTQLT
VPILDALSSLNLSSSLLTEVRGAVMATLAAVQLEDLPVVVKFILHAVSASDAYEVVYNLR
KKLELEQCVLLPALQASQSRIKKKGSVVSASTPAAGSSQDSVTLILDGIKSAVRFQKTIS
EAWLKAIESVDEVEDHKVIDLLVLFILHSTNANQSRRGAERVLKIKVRTGLIQDALLQRT
FRDYAQVMRGYFPSILALAQTLLRSPDPCVVPFGGHMYRHAFTAFDSYCQQEVVSSLVTH
VCSGVGGEVDMALELLSGLVTEKPSEMSLYAVFVKGILDYMDNLTPQQIRRLFHLLSRLA
FGQQQQGSHIQDDMHIVIRKQLSSTVPKYKRIGIIGAVMIVGSMGAFRLKVKESQNGSLP
QETFRQVTALLELVKSSSESSPEAAALYYDELANLILISNLDPQVQETIADSVVRDFQDD
FVVDVGPEISGSFPFPACVMYNLDEKESQENIAINLLPVLAKDMQNKGEQQSQTKKAHRR
VSPLCLSPFFRLLRLCEEKQNEGGLEEIDGLLGCPVILTDMDVVEKMESLSKAEKEFLCT
LLFHTINWFREIINAFCRQKETEMKMKVMTRLQNITYLQTLLERALAETPGYVPPVANFD
GESTDGTMLSTSAPVNKAKKEGTGKKRKAPAKNSSESSSQLDESTEADKTQQEQPEKEKE
KEIRQGVSLVSYRQFFRELDIEVLSVLQCDLISRSLLDSELNTKAVEEVVLGPAELVFLL
EDMFRKLEFSLTAAPAKRSPFLKGRTDKSVGFSHLQQKSSKDIASCCVELLPALCSHLEN
CHNHFQTLLSENNGVVDGPATDVQEHQLMSSAYQLLLQVLNTAFSWSGFSQPGQRNLLKK
ALGVMAGRLKEGGAELTLEQLVKHSFEYLVNFRSTMPNLSTALCLSQLLSTVSEKGGNPA
AYREQTASLAKRFLSQEWVTASGEKERGNKFNEALHTLLSIYLEHVDDVLKAVEEIAGEG
IPELLNASKDESSASWPTLSRQTFLVFYKVLLAELEKAARKIPASKNSDSTEAQSEKLLT
WNLAVRDFHILVNLVKVFDSRPVLSVCLKYGRHFLESFLKLGMPLLDNSFKRHKEDVQSL
LKTFQLSTRQLHHLCGHSKIHQDMSLTNHVPALKKSLELFVYRVKAMLTLNNCQEAFWIG
NLKNRNLKGEEILSQRSQESEDDGEEEEEEERRSPQPEEESEDEAQETDRGESKKGAKED
EVEEDISDDSD
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtaaaaagcgccggtcctccgtggataaaggagaggaagctgccacggccacc
aagtcaaagaagagtcggagcgctggtcgtcagccaaaggaagctccctcggaagagaca
aatcaaagtgtgtttggcgttttccttcgagaggcaggtgtcaccctcaaacaaggtggc
acgtccaatgagatagctgttgaccaagtagtcttccagaaaaggatacagaaacaactg
aagaagagtcccaggtaccctgggattgtacaggagttcaccgctggattggagtctcac
atcgaggaccctgagcggttcaggaactgcctccttccatgtgtcccacggttatctgac
ggagactccagttgtgtcagctcattccaggagagtctgctacgcatgctgttggggatc
gagatgctgcagactttcatcattaacatcttgctggagaaactccctgaatatatgttg
gatggccctgcagatggaggcctcagtattccccgcataataattaaccagcttaaatgg
ctagacagagtcgtggacagcaaggagctggcgacgaagctcatggagctggtgtcggta
gcaccagtggaggtccagcgtgacatcatcaccagtctgcctgagatgctggacgactcc
cagcacaatgatatagccagagagctcaacactttactccaggagaacactcagttgacc
gtccccatcctggatgccctctctagtctgaacctcagctcctcattactgactgaggtt
cgtggagccgtcatggccactttggctgccgtgcaactggaagacctgcctgtggtggtc
aagttcatcctgcacgctgtctcagcctctgatgcgtacgaggtggtgtataatcttcgt
aaaaagctggagctggagcagtgtgtcctcctgcctgcgttgcaggcctcccagagccgc
attaagaaaaaaggatcagtagtgtctgcttccacaccagcagctggcagcagccaggac
agcgttacactgatactggacggcatcaagtcagcagtgcgattccagaaaacaatatct
gaagcgtggctcaaggcaatcgagtctgtggacgaagtggaggaccataaggtgatagat
ctgctggtgctctttatcctccactccaccaatgccaaccagagccggcgcggagcggag
agagtgctgaagataaaagtgaggactgggctgatccaggacgctctgctccagagaacc
ttcagggactacgctcaggtcatgcgagggtatttcccctccatcctggctctggctcag
actttgctgcgctcccccgacccctgcgtggtgcctttcggtggacacatgtaccgacac
gcgttcactgctttcgactcttactgccaacaggaagtggtgagctctttagtgacccat
gtttgcagcggtgtgggcggggaggtggacatggctctggaactgctcagtggcctggtt
acggaaaaaccttcagaaatgtctttgtatgctgtttttgtcaagggaatcttggactac
atggacaacctcacaccccagcagatccgcagactgttccaccttctgagcaggctggcc
tttggtcaacagcagcagggatctcacatccaggatgacatgcacatagtgatccgcaaa
cagctctccagcaccgtgccgaagtacaagcgtatcggtattatcggcgctgttatgatt
gtgggcagcatgggggccttcaggcttaaagtaaaggagtcacagaacgggtcgttaccc
caggagacgttcagacaggtgaccgccctgttggagctggtgaagtcgagcagtgaaagc
tcacccgaggctgcagctctgtactatgatgaacttgccaacctgatcctgatctccaac
ctggaccctcaggtgcaggaaacgatcgcagacagtgtcgtacgtgacttccaggatgac
tttgtggtggatgtaggaccagagatatcgggttcctttccttttccagcctgtgtgatg
tacaacctggatgagaaggagagtcaggaaaacattgccatcaacctgctgcctgtactg
gccaaagacatgcagaacaaaggagagcagcagagtcaaaccaagaaggctcacaggcga
gtgtctcctctctgtctgtctccattttttcgccttctgagactctgcgaggagaagcag
aatgagggaggcctcgaggagatcgacggcctgctgggttgccctgtgatcctgacagac
atggacgtagtagagaaaatggagagcctgtcgaaagcagagaaggagttcctctgtact
ctgctgtttcacaccatcaactggttcagagagatcataaatgcattttgtagacaaaaa
gaaactgagatgaagatgaaagtgatgactcgcctgcagaacatcacgtaccttcagaca
ctgctggagagggcgttggcagaaacgcctggatatgttccccccgttgccaactttgat
ggagaaagcacagatgggacaatgcttagtaccagtgctcctgtaaataaggcaaagaaa
gagggcacaggaaagaaaaggaaggcccctgctaagaattcctcagagagcagctctcag
cttgacgagtcgactgaagcagacaaaactcagcaggagcaaccggagaaggagaaagaa
aaggagatccggcaaggcgtcagtctcgtgtcctacagacagtttttcagagagctggac
atcgaggtgctcagtgtgctgcagtgtgatttgatttcccgctcactgctggactctgag
ctcaacaccaaggcagtagaggaggttgtgctcggtcctgctgagctggttttcctgctg
gaggatatgtttcgcaaactggagttcagtcttacagctgcacctgccaagagatccccc
ttcctcaagggaaggactgataagagtgtaggcttctcccatctacaacagaagagctcc
aaggatatcgcttcctgctgtgttgagctgctgcccgccctctgctcacacctggaaaac
tgccacaaccattttcagacgcttctgtctgagaacaacggtgtcgtggacggacctgcc
acagacgttcaggagcaccagctgatgtcctcggcctaccagctgctcctgcaggtcctg
aacaccgctttcagctggtctggatttagccagccaggacagcggaacttactgaagaag
gctctgggagttatggctggacgactaaaagagggaggtgcagagttgaccctggagcag
cttgtaaaacacagcttcgagtacctggtgaacttccgcagcacaatgccaaatctcagc
acagccctgtgtctctcccagcttctgtccactgtgtcagagaaaggagggaaccccgct
gcctacagagagcagaccgcctccctcgcaaaacgtttcctgagccaagagtgggtgacg
gccagcggagagaaggagcgtgggaacaaattcaacgaagcacttcacactctcctaagc
atctacctggagcatgtcgacgacgttctgaaggcagtggaggaaatagccggagaagga
atccccgagctcctcaacgcatcaaaagatgagagctctgcatcgtggcccactctcagc
aggcagacgttcctggttttctataaagtgttgttggcagagctggaaaaggctgccagg
aagattcctgcttccaaaaacagtgacagcactgaggctcagagtgagaagctgctgaca
tggaacctggctgtcagagatttccacatcctagtcaacctagttaaggtgtttgattcg
aggccggtgctcagcgtgtgcctgaagtatggacgccatttcctggaatctttcctgaag
ttggggatgccactattagacaacagtttcaagaggcacaaggaggatgtccagagcctt
ctgaaaaccttccagctcagcactcgccagctgcatcacttgtgtggacactctaagatt
caccaggatatgagcctgaccaaccacgtaccagccttaaagaagagcctggagctgttt
gtttacagagtgaaggccatgctgacgctcaacaactgtcaggaggcattttggatcgga
aacctgaagaatcgcaacctgaagggtgaagagattctttctcagaggtcacaagaaagt
gaagatgatggcgaggaggaggaggaggaggaacgacgttcaccacagcctgaggaagag
tcagaggatgaggcccaggaaacggaccgcggggaaagtaagaagggcgccaaagaggac
gaggtggaggaagatatttcagacgactctgactaa
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