Larimichthys crocea (large yellow croaker): 104930582
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Entry
104930582 CDS
T04659
Symbol
tnxb
Name
(RefSeq) tenascin-X isoform X1
KO
K06252
tenascin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104930582 (tnxb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104930582 (tnxb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104930582 (tnxb)
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104930582 (tnxb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
EGF_2
EGF_Tenascin
Fibrinogen_C
fn3
hEGF
EGF
FN3_Tor_3rd
Ig_DSCAM-DSCAML_C
EGF_integrin
Big_5
Ig_J
Motif
Other DBs
NCBI-GeneID:
104930582
NCBI-ProteinID:
XP_019122409
LinkDB
All DBs
Position
XIII:12131234..12167709
Genome browser
AA seq
2449 aa
AA seq
DB search
MFLFVPSFLLVLLLAAPALLTPSTSQELEVRGQRTPRDTKEDSIKVVITEGCATQGDSAN
VNQGGKEIDLSPGSPLVLTHKIKFVPSSSGSGSGPCGCEKDFAALRERLERLEREVSALR
EKCGGAEGSCCTSKESKGAGCSIKPEIDECPNECSDQGRCVEGKCVCFPGFSGPDCGESN
CPGNCNDKGRCVNGQCVCDPGFTGPDCSQGSCPDNCNNRGRCVNGRCVCDSGFTGPSCSD
ESCPGNCNNKGRCVNRQCVCNPGFTGPDCSKKACPKNCSDRGRCVNGKCVCDSGFAGADC
SEKSCPGNCNNRGRCINGQCVCKPAFTGPDCSTRACPDNCNNRGRCVNGNCVCHSGFTGA
DCSEIACPGNCNGRGRCIDGECVCSDGFSGPDCSEKTCPNDCYDRGRCVDGKCVCDSGFT
GDDCSEKSCPGNCNNRGRCVNGQCVCNDGFTGSDCSERSCPENCNNRGRCVNGQCVCNDG
FTGSDCSEKSCPGNCNNRGRCVNGQCVCNDGFTGSDCSEKSCPGNCNNRGRCVNGQCVCN
DGFTGADCSEKACPNNCKNHGKCVNGVCVCDVGFAGPDCTAKSCPNNCSNKGRCIKGRCV
CRRGFIGPDCSQCEEGKTGPNCDTVMLGVSQLSTRDITETSVTLVWTPPPVQYDSYHITF
TSQKESDQQITVQVEGSLTTFTQMGLAAGQEYTVSITGEIEGRRGAESSSEFMTLISGPT
NLQVVKTTTTSAVVQWEHSQGEIDRYRLTVTPNDGAGRSQEMTIPGGQNSAHIQQLEAGR
LYDIALVAEKDTSRSEPTTTQVTPGKTLPRVTVPALTTQVTLPPGQDVDDRDQKSSEVQV
FDQEGRKKADPLKVRGSDGPDTDSTAPVIARTKPLVNKKMAINGTRKPNVSGPFRFNTTR
FVPVRKVGQGPLKKPLVGEKKKVPVVRKKPKPGVPIIRDRTIALTETDPSVEESSTESRD
AKDPALMSGTDSDTNSQSSLEKPTIPAGSTEQPDVGMVGHGNDTDSVLSEPIGTVQSQEK
KCMNKVKVTHFRLPLKDKGNGCRGDGTLLVRKILGSHQGSSETDVTPDSKPSSTETDVDY
STDPLHKLLMNTFENMNITTFSVHLSKPSNLSVVSENLTKQILRGLKPLSSIASSSSSTS
QSSSHSSDEPSSSLPSSSPSSSSLVSSPSSSLTYLDSSSHSSPSPRPSLLKSSSLSPPSS
SISSSDESGSVRSNKLDVDNSKTMADVASPEDRKQPPSGKGGVLFFRRTPTKNGFVRRLR
PNFKSLHNKTHPHMTAPHHSPPHLNLQHTPTSELLTSPSSSTSIESSSVEVNVPASDTSG
YKNGETTPAPIGVGQNEEKMPTKREQIPNRRLPQNGRYLHRPRPNFGPLQNRTRPNLRPL
PPPSQSLNPASETRKEQVSTTELPATSSPVAKEAYPTESTGPIGEENADKIRTSMSTEFN
QTSRGGGLPSSHRPTTRVGYFRRLYNQRLQNKTRPNLRSPQHPHRGPVRKPFPTRKLNEG
NTIAVGSQTNQLEKVSTPEIPDNQPGEPDSPMPTQGVQIRQSGKQDTTEVIPSAPVDSLD
TTIRPQTNELEGGLDAPVQTTKSREEETRSPDPNLDSEIHKETSNPARPQANRLRGGQDD
PVQTTKSREEETRSPDPNSDSEIHKETGNPARPQANHLRGGQDDPVQTTKSREEETTTPD
PNSDIHKDRVIPVRPQTNELEGGQDAPVQTTKPEKETRTPEPNSDSDIHKERVNPGNNTS
ATSRGRPTIKQTSSGLRHGVPNKPPVRSTQMRHYISGSQMRENTKRNITAKRLFDGKPEQ
TESKSKPLTVSDVSSSGVTREPLDSVEVTNRTSDGFMLTWDSPEGKYKNFVVTRKEVEKP
KQKESKRGHKEEPEDSEKEEVNRQPTKEDENRLPESVFTQSSTTAKPVTGSDKIFKTVLP
GSARSFQFEDLPRQTDYTVTLLGKGPGLLSRLHKLVISTGPEPPTNIVFSKVTEDSLTVS
WTKPKSAVSGFKVTYTHTDDGEPVSVSVDSGDSSVGLSQLSPGSSYEVNVISILGLDESD
PIRDFVRTLPDPPTDLRAVNVTDTKALLLWRPALATVDEYTIVYGAGTGSELRVMVSGNE
AEHQLSGLEGSTTYTVTISSRLGNQESSPATTSFTTTKASGNGPQDLQASNVTPRTALLS
WKRPPNPVGSYRLTYQTEGHEMKEVIVGAAVTEYNLTRLHPGSKYTVQLQAEEGGRYTST
ISTEFTTGTLRFPFPTDCSQELLNGIKASGEVEIFPQGKLGKPVMVYCDMETDGGGWTVF
QRRKDGSVNFFRGWKDYTKGFGDLSGEFWLGLDSLHNLTTMTRMNLRVDLRDKDESVYAE
YSTFEVAKRNYRLTVGGYSGTAGDSFSYHNNRVFSTKDRDPTPFITRCAMSYRGGWWYKN
CHEANLNGLYGIDVKHQGVIWTSWKGKQHSIPFTEMKMRPASFYPPVRG
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcttcgtcccctccttcctcctcgtcctcctcctggctgctccggccctcctg
accccgtcgacctcgcaggagttagaggtcagaggtcaaaggacgccgagggacaccaag
gaggactccatcaaggtggtgatcaccgagggctgcgccactcagggggattcagccaac
gtcaaccagggaggtaaagaaatcgacctgagtccaggttctcctctggtcctgacccat
aagatcaaattcgttccgtcaagttcgggttcaggatccgggccttgcggttgcgagaag
gactttgccgccctgcgggaacgtctggagaggctggagagggaggtgtcggccctcagg
gagaaatgtggaggagctgagggcagctgctgcacctccaaggagagcaaaggtgcaggt
tgctccatcaaaccagagatcgacgagtgtcccaacgagtgcagtgatcaaggtcgctgc
gtggagggcaagtgtgtctgcttccctggttttagtggaccggactgcggcgagtccaac
tgtcctggaaactgcaacgacaaagggaggtgcgttaacggacagtgcgtatgcgatcct
ggtttcaccggccccgactgttcacagggaagctgccccgataattgcaacaaccggggc
aggtgtgtgaatggcaggtgtgtgtgtgacagcggcttcactggtcccagttgctcagat
gaatcctgtcctggaaattgcaacaacaaggggcgttgcgtcaatagacaatgtgtgtgc
aaccctgggttcactggcccagactgctccaagaaggcatgtccgaagaactgcagtgac
cgtggaaggtgtgtaaacggtaaatgcgtttgcgacagcggctttgctggtgctgactgc
tctgagaagtcctgccctggaaactgcaacaacagggggcgctgcatcaacggacagtgt
gtctgtaagcctgcattcacaggaccagattgctccacaagggcctgtcctgataactgc
aacaaccgtggaaggtgtgtgaacggtaactgtgtatgccacagcggctttactggtgca
gactgctctgagattgcctgcccgggcaactgcaacggcagggggcgctgtatagacgga
gagtgtgtttgcagtgatggattcagcggtccggactgctcggaaaaaacatgccccaat
gactgctacgaccgtggaaggtgtgtagatggaaaatgtgtgtgcgatagtggcttcact
ggtgatgactgctctgagaagtcctgccctggaaactgcaacaacagggggcgctgcgtc
aatggacagtgcgtttgcaatgatggattcaccggttcagactgctctgagaggtcctgt
ccggaaaactgcaacaacagggggcgctgcgtcaatggacagtgcgtttgcaatgatgga
ttcaccggttcagactgctccgagaagtcctgcccgggaaactgcaacaacagggggcgc
tgcgtcaatggacagtgcgtttgcaatgatggattcactggttcagactgctccgagaag
tcctgtccgggaaactgcaacaacagggggcgctgtgtcaatggacagtgcgtttgcaat
gatggattcaccggtgcagactgctctgagaaagcttgtcccaacaactgcaaaaaccac
gggaaatgtgtgaatggggtgtgtgtttgtgacgtgggcttcgccgggccggactgcacc
gccaaaagctgtcccaataactgcagcaacaaaggacggtgcatcaaagggaggtgtgtc
tgccgccgtgggtttattggaccagactgcagccagtgtgaggaggggaagaccggaccc
aactgtgataccgtcatgttgggtgtttctcaattgagtactcgggacatcacagagacg
tccgtcactctcgtctggactccgcctcctgtccagtatgacagctaccacatcaccttc
accagccagaaggagagtgaccagcagataactgtgcaggtggagggcagcctgaccacc
ttcacccagatgggcctggcagccggtcaggagtacaccgtcagcatcaccggagagatc
gagggcaggaggggtgccgagagctcgtctgaattcatgacactcatatctggtcccacc
aacctccaagttgtcaagacaaccacgacatctgcggtggtgcaatgggagcattcgcag
ggtgagattgacaggtaccgcttgaccgtcacgcccaatgacggagcaggaagaagtcaa
gaaatgaccatcccgggtggccaaaactccgcccacatacagcagctggaggcgggacgt
ttgtatgacatcgcacttgtggcggagaaggacacaagtcggagtgaacccacaaccact
caggttactcccggaaagacattaccaagggttaccgtgccagctttaaccacgcaggtc
acattaccacctggacaagatgttgacgacagagaccaaaagtcatctgaggtgcaagtc
tttgaccaagagggaaggaaaaaggcagaccctctaaaagtgagaggttcagatggacct
gacacagactccacagcccctgtgattgcaagaactaaacctctggtcaacaaaaagatg
gcaataaatggcaccaggaagccaaatgtatcaggccctttccgtttcaacacaaccaga
tttgtgcctgtgagaaaggttggccaaggtcctttgaaaaagcccctagtgggggagaag
aagaaggtaccagtagtacgtaaaaaacctaaaccaggtgtccccatcatcagagacaga
acaatagctttgactgagacagacccaagtgtggaggaatcaagcactgagagcagggat
gccaaagatccagctctaatgtccggaactgattctgatacaaacagtcaaagcagcctg
gagaaaccaactattcctgctggctccacagagcaaccagatgttggcatggtaggccat
ggaaatgacactgattcggtgctttcagagccaattgggactgttcaaagccaagagaag
aaatgtatgaacaaagtaaaagtgacccacttcagattacctctaaaggacaaaggcaac
gggtgtagaggggatggaacgttgttggtaagaaagatcctgggctcacatcaaggttcc
tctgaaacagatgttactcctgattcaaaaccctcgtctacagagacagacgtcgactat
tcaacagatcctttacataaactcctgatgaacacttttgagaatatgaacatcacaacc
ttttctgttcacctgtccaaaccatcaaacctctcggttgtctcagaaaatctgacgaag
cagattttaaggggactaaagccattgtcgtcaatcgcatcctcatcctcatcaacctca
caatcatcatcacactcatcagatgaaccatcatcatcattgccatcatcttcaccctca
tcctcttcactagtctcatctccgtcatcatcactaacgtatttagattcgtcatcacac
tcatcaccatcaccacgaccatcattactaaaatcatcatcactgtcacctccatcttca
tccatttctagctcagatgaatcaggttcagttagaagcaataaactggatgttgataac
agcaaaaccatggctgatgttgcatcacctgaagacagaaagcaaccaccctcaggtaaa
ggtggtgtactttttttccgccgcacacctacaaaaaatggatttgtgcgtcgcctacgc
ccaaactttaaatcattacataacaaaacccatccgcatatgacagctcctcaccattcc
cctcctcatttaaacctacaacatacacccacaagtgagttattgacttcaccatcttca
tctacttcaattgaatcatcctcagttgaggtcaatgtacccgcaagcgatacgagtgga
tacaaaaatggggaaactacacctgcacccattggagttggacaaaatgaggaaaagatg
ccaacaaaaagagaacaaatcccaaaccgtcgtcttcctcaaaatgggagatacctgcat
cggccacgtccaaactttggacctcttcagaatcgaacccgtccaaatttgaggccactg
cctcccccctctcaatctttaaatcctgcatcagaaacaagaaaagagcaggtatctact
actgaattaccagccacttcatctcctgttgccaaagaagcctatccaactgaaagtacg
gggccaataggagaggagaatgcagacaaaattcgcacaagtatgtccactgagttcaat
cagacttcaagaggaggtggactgccttcctctcaccggccaaccaccagagttggctat
ttccgtcgactgtacaatcaacgtttgcaaaacaaaacccgtccaaacctgcgatcacct
caacatccacatagaggtccagtgcgcaagcctttcccaaccagaaagctgaatgaaggt
aacacaattgctgttggaagtcaaactaaccaattggaaaaggttagtactcctgaaatc
ccagataaccaaccgggagagccggattcacccatgcctacccaaggagtccaaattaga
caatcaggaaaacaagacaccacagaggtaattccaagtgccccagtggatagccttgac
actaccatcagaccacagactaatgaattagaaggggggctggatgctccagtccaaact
accaaatctagggaagaagaaactagaagcccagatcctaacttggactctgaaatccat
aaagagacaagcaatcctgccagaccacaggctaatcgtttaagagggggacaggatgat
ccagtccaaactaccaaatctagggaagaagaaactagaagcccagatcccaactcggac
tctgaaatccataaagagacaggcaatcctgccagaccacaggctaatcatttaagaggg
ggacaggatgatccagtccaaactaccaaatctagggaagaagaaactacaaccccagat
cctaactctgacattcataaagacagagttattcctgtcagaccacagactaatgaatta
gaaggggggcaggatgctccagtccaaactaccaaacctgaaaaagagactagaacccca
gagcctaactctgactctgacatccataaagagagagtcaatcctggcaacaatactagt
gctacaagtcgaggtagaccaactataaaacaaacttcctccggtttaagacatggagtt
ccaaataaaccaccagtgagaagcacccagatgagacactacatcagtgggagtcaaatg
agagagaatacaaaaagaaatattactgcaaaaaggctgtttgacggtaaacctgaacag
acagagtccaagtccaagcctctgacggtatcagacgtttcttcttctggagttacgagg
gaacctctggactctgtggaagtgacgaaccggacctcagatggatttatgctgacatgg
gactctccagaaggaaagtacaaaaactttgttgtgacaagaaaagaagttgaaaaaccg
aagcagaaggaaagcaagagaggtcacaaagaagaaccagaggactctgaaaaagaggag
gtgaatcgtcaaccaaccaaagaagatgaaaacagacttcctgaaagtgtctttacacaa
agcagcacaacagccaaaccagtgacaggaagtgacaaaatcttcaaaacggttcttcct
ggttcagctcgctccttccagtttgaggatctgcctcgtcagaccgactacaccgtgact
ttgcttggaaaggggcctggccttctgtccagactgcacaagcttgtcatcagtacaggc
ccggagcctcccaccaacatagtcttcagtaaggtgacagaagactctctgacggtgtca
tggaccaaacccaagagcgccgtcagcggttttaaggtcacctacacccacacagacgac
ggtgagccggtgtcggtatccgtggactcaggcgactcctctgtgggcctatcacagctc
tcacctggttcttcttacgaggtcaacgtcatctccatcctcggactggatgagagcgat
ccaatcagagactttgtcaggacgctccctgacccacctactgacctccgggctgtaaac
gtcacagacaccaaggccttgttattgtggcgtccagcattggccactgttgatgaatac
accattgtttatggcgctgggacgggttcagagttaagggtcatggtgtctggaaacgaa
gcggagcatcagctgagtggtctggaaggatccaccacctacaccgtcaccatcagcagc
cggctgggcaaccaggagagctcaccggccaccacctcgttcaccaccaccaaagcctct
gggaacgggccacaagacctccaggccagcaacgtgacccctcgcactgccctgctatca
tggaaacggccgccaaatcccgtgggcagctacagactgacctatcagacggaaggtcat
gaaatgaaggaagtgattgtgggcgccgcagtaaccgagtacaacctgaccagacttcac
cctgggtcgaagtacacggtgcagctacaggcagaagaaggaggacgatacacttccacc
atctccactgagttcaccaccggcaccctgaggttccccttccccacagactgctctcag
gagctgctgaacggcatcaaggcgtcaggtgaggtggagattttccctcagggcaaactc
gggaagcctgtgatggtttactgcgacatggagacagacggaggaggctggacggtcttc
cagaggaggaaggacggctcggtgaacttcttcagaggctggaaagattacactaaagga
tttggagatctgagtggagagttttggctgggtctcgacagcctccacaacctgacaacg
atgaccaggatgaatcttcgtgtcgacctgcgagacaaagacgagtcggtgtacgcagag
tactcaacgttcgaggtggccaagaggaactacagactgactgtaggcggatacagcggc
accgcaggtgattctttcagttatcataacaaccgggtcttctccaccaaagaccgggat
ccaacaccgttcatcacccgctgtgccatgtcgtaccgaggaggctggtggtacaagaac
tgccacgaggcaaacctcaacggcctctacggcattgatgtcaaacaccagggtgtgatc
tggaccagctggaaaggaaaacagcactccatcccgttcactgagatgaagatgagaccg
gcgtccttctatcctccagtcagaggatag
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integrated database retrieval system
