Larimichthys crocea (large yellow croaker): 104930626
Help
Entry
104930626 CDS
T04659
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104930626
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104930626
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104930626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
104930626
NCBI-ProteinID:
XP_027133737
LinkDB
All DBs
Position
III:17304294..17436135
Genome browser
AA seq
1305 aa
AA seq
DB search
MLAEADGTVPHGRESSMRTSNINNNLNPDSSILISKMEDVVIPFSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKFLWTVCCHCNIKPKEVQKVSNPVSNPASDKPKGTDEK
EEVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQN
FYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSW
LGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPW
ENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEII
ELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISP
NLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMR
VISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWREGDDAICLAELKAGFIAQSCLAQGL
STMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKL
LLIAIEYKSELNESRSRKRIIINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDI
TDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSEQDCSCMSGSVHSNMDTLQRAYPL
SSVSVHDCATTLRASKYKYNGYVRSPADGATTPGNSGSQKEAGVRFKADCNLVEDEHPSA
LSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEIDNMDMNVKRYDSTGMFHWCPPKEI
EKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIVFVGSL
EYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKEC
ILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGANIPIIT
ELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTL
VTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLAIYDGPFADLGDGGCYGDLF
CKALKTYNMLCFGIYRLRDAHLEVPSPCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAG
QSRTSLSHSSHSSHSSSKKSSSVHSIPPSNRQNRSSKTRESRDKQNATRMNRMGQEKKWF
TDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcagatggcaccgttccccatggacgcgagagctctatgaggacaagc
aatatcaataataatctaaatccggactcttcaatcttaatatccaagatggaagacgtt
gtcatcccgttctcgtctgaggtgccctgcgacaataatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgttttttgggggtctcttcatcatactgctatggagg
accctcaaatttctgtggactgtttgctgccattgcaacatcaaacccaaggaggttcag
aaggtgagcaatcccgtcagcaatccggcatcggacaaaccaaaaggtactgatgagaaa
gaggaggtcccagccagcgaggtgggatggatgacttcagtcaaagactgggccggtgtt
atgatctccgctcagacactcactggcagagttctggtggtgttagtctttgcactcagc
atcggggcccttggtatatactttatagactcctcagatcctatagaatcctgccagaac
ttctacaaagatttcacgttacagatcgatatggccttcaatgtcttcttccttctttac
tttggcctgcggtttatagcagccaatgataagctgtggttctggctggaggtcaactca
gtggtcgacttcttcactgttcctcctgtgtttgtctctgtctacttaaacagaagctgg
cttggtttaagattcctgagagcgctaaggttgatacagttctcggaaatcttacagttt
ttgaatatcttgaaaacaagcaattccatcaagcttgtgaacctgtgttccatcttcata
agtacgtggctcacagctgctggattcatacatttggtggaaaactcaggggatccttgg
gaaaacttccagaattcccagtcactttcctattgggaatgtgtctatttgctgatggtg
actatgtctacggtgggctacggggatgtctatgcaaaaaccaccttggggcgcctgttt
atggtcttcttcatcctcggcggtttggccatgtttgccagctacgtccctgaaatcata
gagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaag
catattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagacttc
ctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccct
aatcttgagctggaagccttgttcaaacgtcattttacccaagtggagttctatcaggga
tctgttctcaaccctcacgacctggccagagtgaagatcgagtcagcagatgcctgttta
atccttgccaataaatattgtgcagatcctgatgctgaagatgcctccaacatcatgagg
gttatttcaataaagaactaccaccccaagatccgaataatcacacaaatgctacaatat
cacaacaaggctcatctgctcaacattccaagctggaactggagagagggtgatgatgct
atctgcctggcggagctgaaggcaggcttcattgcccagagctgtctggcccagggcctg
tcaaccatgctagccaacctcttctccatgaggtccttcattgagattgaggaggacaca
tggcagaagtattacctagaaggagtggctaatgagatgtacacagagtatttgtccagt
gcctttgtgggcctctccttccctactgtctgtgagctgtgttacgtgaagctgaagctg
ttgcttattgccatcgaatacaagtctgagctgaatgagagcagaagccgaaagcgcatc
atcatcaacccgggcaaccatgtcaagatgcaggaggggacactgggattctttatagcc
agtgatgccaaagaagttaagagagcatttttctactgcaaagcttgtcatgacgacatc
acagaccctaagcggatcaagaagtgtggctgcaaacgactgatttattccaagatgtcc
gtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcaagactgc
tcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctacccactt
tcctctgtctctgttcatgattgcgcaaccactttacgtgcctccaaatataagtataat
ggatatgtcagatcaccagcagatggcgctacaacaccagggaacagtggaagccaaaaa
gaggctggcgttcgattcaaagccgattgcaatttagtggaagacgagcatccgtcagct
ctctcgcccaaaaaaaagcagcgcaatggagggatgcgaaactcacccaactgctcgcct
aaaatgatgagtagacatgacccccttctaattcctggaaatgaaattgacaacatggac
atgaacgtgaagaggtatgactcgacagggatgtttcactggtgccccccaaaggagatc
gaaaaagtcatcttgacccggagtgaggcctccatgacagtgctgagcggccatgtggtg
gtctgtatatttggggatgtcacgtccgctttagtggggctgcgaaacttggtcatgcct
ttaagagcaagcaacttccattaccacgagctaaaacctatagtttttgtgggctcgttg
gaatacctgcgaagagagtgggaaactttacacaacttccccaaggtctccatcttacct
ggtacaccattaagccgggcagatttaagggctgtcaacatcaacctctgcgacatgtgc
gtaatactgtcagccaatcagaacaatatcgacgatgcctctctgcaggataaagaatgc
atcttggcatcactcaacatcaaatctatgcagtttgatgacagcattggggtcttacag
gctaactcccaaggtttcacgcctcctggaatggacaggtcatctccagacagcagtcca
gtacatggtttcgtccgccaggcatctgtcaccaccggagccaacatccccatcatcaca
gaactagtgaacgactcaaacgttcagttcctggaccaagatgatgatgacgacccagac
acagagctgtacctcactcagcccttcgcctgcggcaccgccttcgctgtcagtgtactc
gactccctgatgagtgcgacatacttcaatgataatattctcacgctgattcggacgctg
gtcacagggggagccacaccagagctggaggccttgttggctgaggagaatgctcttaga
ggaggctacagcacaccgcagacactggccaacagagacaggtgtcgtgttgcccagcta
gccatctacgacgggccttttgccgacttgggggacggcggctgctacggggatttattc
tgcaaggcactgaagacgtacaacatgctgtgctttggaatctacagattaagagatgct
catctggaagttccaagcccatgcacaaaacggtatgtgatcacgaacccaccctacgag
tttgagctcgtgcccacagacctgatcttctgcctcatgcagtttgaccacaacgcaggc
cagtcccggacaagcttgtcccactcttcccactcctcccattcctccagcaaaaagagc
tcctccgtccactccatcccgccctccaacaggcagaaccgcagcagtaagacccgggaa
tcccgtgacaaacagaatgcaacaaggatgaatagaatgggccaagaaaagaaatggttt
acagatgaaccagaaaatgcctacccacggaacattcagatcaagcccatgagcactcac
atggccaaccaagtcaaccaatacaaatccactagtagtctgattccaccaatcagagaa
gttgaagatgaatgctga
DBGET
integrated database retrieval system
